Toward automatic regional analysis of pulmonary function using inspiration and expiration thoracic CT

Medical Physics

Volumn 39, Issue 3, 2012, Pages 1650-1662

  Murphy, Keelin ^a   Pluim, Josien P W ^a   Van Rikxoort, Eva M ^b   De Jong, Pim A ^c   De Hoop, Bartjan ^d   Gietema, Hester A ^c   Mets, Onno ^c   De Bruijne, Marleen ^e,f   Lo, Pechin ^e   Prokop, Mathias ^b   Ginneken, Bram Van ^b  

^a UNIVERSITY MEDICAL CENTER UTRECHT   (Netherlands)

^b RADBOUD UNIVERSITY MEDICAL CENTER   (Netherlands)

^c UNIVERSITY MEDICAL CENTER UTRECHT   (Netherlands)

^d RIJNSTATE HOSPITAL   (Netherlands)

^e UNIVERSITY OF COPENHAGEN   (Denmark)

^f ERASMUS MEDICAL CENTER   (Netherlands)

Author keywords

airflow; automatic; COPD; CT; functional; pulmonary; registration; segmentation; spirometry; ventilation

Indexed keywords

DISTRIBUTED DATABASE SYSTEMS; GOLD; IMAGE SEGMENTATION; NEAREST NEIGHBOR SEARCH; PIPELINES; PULMONARY DISEASES; REGIONAL PLANNING; VENTILATION;

AIRFLOW; AUTOMATIC; COPD; FUNCTIONAL; PULMONARY; REGISTRATION; SPIROMETRY;

COMPUTERIZED TOMOGRAPHY;

EID: 84857809952     PISSN: 00942405     EISSN: None     Source Type: Journal    
DOI: 10.1118/1.3687891     Document Type: Article

References (39)

1. D. S. Gierada, T. K. Pilgram, B. R. Whiting, C. Hong, A. J. Bierhals, J. H. Kim, and K. T. Bae, " Comparison of standard- and low-radiation-dose CT for quantification of emphysema.," Am. J. Roentgenol. 188 (1), 42-47 (2007). 10.2214/AJR.05.1498
2. T. Kubo, P. J. Paul Lin, W. Stiller, M. Takahashi, H. U. Kauczor, Y. Ohno, and H. Hatabu, " Radiation dose reduction in chest CT: A review.," Am. J. Roentgenol. 190 (2), 335-343 (2008). 10.2214/AJR.07.2556
3. M. Takahashi, W. M. Maguire, M. Ashtari, A. Khan, Z. Papp, R. Alberico, W. Campbell, T. Eacobacci, and P. G. Herman, " Low-dose spiral computed tomography of the thorax: Comparison with the standard-dose technique.," Invest. Radiol. 33 (2), 68-73 (1998). 10.1097/00004424-199802000-00002
4. X. Zhu, J. Yu, and Z. Huang, " Low-dose chest CT: Optimizing radiation protection for patients.," Am. J. Roentgenol. 183 (3), 809-816 (2004).
5. H. Arakawa, H. Niimi, Y. Kurihara, Y. Nakajima, and W. R. Webb, " Expiratory high-resolution CT: Diagnostic value in diffuse lung diseases.," Am. J. Roentgenol. 175 (6), 1537-1543 (2000).
6. H. Arakawa and W. R. Webb, " Expiratory high-resolution CT scan.," Radiol. Clin. North Am. 36 (1), 189-209 (1998). 10.1016/S0033-8389(05)70014-2
7. M. Nishino, G. R. Washko, and H. Hatabu, " Volumetric expiratory HRCT of the lung: Clinical applications.," Radiol. Clin. North Am. 48 (1), 177-183 (2010). 10.1016/j.rcl.2009.09.003
8. E. J. R. van Beek and E. A. Hoffman, " Functional imaging: CT and MRI.," Clin. Chest Med. 29 (1), 195-216 (2008). 10.1016/j.ccm.2007.12.003
9. I. C. Sluimer, A. M. R. Schilham, M. Prokop, and B. van Ginneken, " Computer analysis of computed tomography scans of the lung: A survey.," IEEE Trans. Med. Imaging 25 (4), 385-405 (2006). 10.1109/TMI.2005.862753
10. E. J. R. van Beek, G. McLennan, and E. A. Hoffman, " Ventilation imaging using computed tomography.," Imaging Decisions MRI (Wiley, 2004), Vol. 8, p. 15-23.
11. H. U. Kauczor, J. Hast, C. P. Heussel, J. Schlegel, P. Mildenberger, and M. Thelen, " CT attenuation of paired HRCT scans obtained at full inspiratory/expiratory position: Comparison with pulmonary function tests.," Eur. Radiol. 12 (11), 2757-2763 (2002).
12. H. U. Kauczor, C. P. Heussel, B. Fischer, R. Klamm, P. Mildenberger, and M. Thelen, " Assessment of lung volumes using helical CT at inspiration and expiration: Comparison with pulmonary function tests.," Am. J. Roentgenol. 171 (4), 1091-1095 (1998).
13. J. Zaporozhan, S. Ley, R. Eberhardt, O. Weinheimer, S. Iliyushenko, F. Herth, and H. U. Kauczor, " Paired inspiratory/expiratory volumetric thin-slice CT scan for emphysema analysis: Comparison of different quantitative evaluations and pulmonary function test.," Chest 128 (5), 3212-3220 (2005). 10.1378/chest.128.5.3212
14. K. Murphy, B. van Ginneken, J. M. Reinhardt, S. Kabus, K. Ding, X. Deng, K. Cao, K. Du, G. E. Christensen, V. Garcia, T. Vercauteren, N. Ayache, O. Commowick, G. Malandain, B. Glocker, N. Paragios, N. Navab, V. Gorbunova, J. Sporring, M. de Bruijne, X. Han, M. P. Heinrich, J. A. Schnabel, M. Jenkinson, C. Lorenz, M. Modat, J. R. McClelland, S. Ourselin, S. E. A. Muenzing, D. De Nigris, D. L. Collins, T. Arbel, M. Peroni, R. Li, G. C. Sharp, A. Schmidt-Richberg, J. Ehrhardt, R. Werner, D. Smeets, D. Loeckx, G. Song, N. Tustison, B. Avants, J. C. Gee, M. Staring, S. Klein, B. C. Stoel, M. Urschler, M. Werlberger, J. Vandemeulebroucke, S. Rit, D. Sarrut, and J. P. W. Pluim, " Evaluation of registration methods on thoracic CT: The EMPIRE10 challenge.," IEEE Trans. Med. Imaging 30 (11), 1901-2000 (2011). 10.1109/TMI.2011.2158349
15. K Murphy, B. van Ginneken, J. M. Reinhardt, S. Kabus, K. Ding, X Deng, and J. P. W. Pluim, " Evaluation of methods for pulmonary image registration: The EMPIRE10 study.," Medical Image Analysis for the Clinic: A Grand Challenge (2010), pp. 11-22.
16. J. M. Reinhardt, K. Ding, K. Cao, G. E. Christensen, E. A. Hoffman, and S. V. Bodas, " Registration-based estimates of local lung tissue expansion compared to xenon CT measures of specific ventilation.," Med. Image Anal. 12 (6), 752-763 (2008). 10.1016/j.media.2008.03.007
17. T. Guerrero, K. Sanders, E. Castillo, Y. Zhang, L. Bidaut, T. Pan, and R. Komaki, " Dynamic ventilation imaging from four-dimensional computed tomography.," Phys. Med. Biol. 51 (4), 777-791 (2006). 10.1088/0031-9155/ 51/4/002
18. K. Ding, K. Cao, R. E. Amelon, G. E. Christensen, M. L. Raghavan, and J. M. Reinhardt, " Comparison of intensity- and Jacobian-based estimates of lung regional ventilation.," Third International Workshop on Pulmonary Image Analysis (CreateSpace, Beijing, 2010), pp. 49-60.
19. R. Castillo, E. Castillo, J. Martinez, and T. Guerrero, " Ventilation from four-dimensional computed tomography: Density versus Jacobian methods.," Phys. Med. Biol. 55 (16) (2010). 10.1088/0031-9155/55/16/004
20. C. D. Mathers and D. Loncar, " Projections of global mortality and burden of disease from 2002 to 2030.," PLoS Med. 3 (11), e442 (2006). 10.1371/journal.pmed.0030442
21. K. F. Rabe, S. Hurd, A. Anzueto, P. J. Barnes, S. A. Buist, P. Calverley, Y. Fukuchi, C. Jenkins, R. Rodriguez-Roisin, C. van Weel, and J. Zielinski, " Global strategy for the diagnosis, management, and prevention of chronic obstructive pulmonary disease: GOLD executive summary.," Am. J. Respir. Crit. Care Med. 176 (6), 532-555 (2007). 10.1164/rccm.200703-456SO
22. R. Pellegrino, G. Viegi, V. Brusasco, R. O. Crapo, F. Burgos, R. Casaburi, A. Coates, C. P M van der Grinten, P. Gustafsson, J. Hankinson, R. Jensen, D. C. Johnson, N. MacIntyre, R. McKay, M. R. Miller, D. Navajas, O. F. Pedersen, and J. Wanger, " Interpretative strategies for lung function tests.," Eur. Respir. J. 26 (5), 948-968 (2005). 10.1183/09031936.05. 00035205
23. D. M. Xu, H. Gietema, H. de Koning, R. Vernhout, K. Nackaerts, M. Prokop, C. Weenink, J. Lammers, H. Groen, M. Oudkerk, and R. van Klaveren, " Nodule management protocol of the NELSON randomised lung cancer screening trial.," Lung Cancer 54 (2), 177-184 (2006). 10.1016/j.lungcan.2006.08.006
24. E. M. van Rikxoort, B. J. de Hoop, M. A. Viergever, M. Prokop, and B. van Ginneken, " Automatic lung segmentation from thoracic computed tomography scans using a hybrid approach with error detection.," Med. Phys. 36 (7), 2934-2947 (2009). 10.1118/1.3147146
25. E. M. van Rikxoort, B. van Ginneken, M. Klik, and M. Prokop, " Supervised enhancement filters: Application to fissure detection in chest CT scans.," IEEE Trans. Med. Imaging 27 (1), 1-10 (2008). 10.1109/TMI.2007. 900447
26. B. van Ginneken, W. Baggerman, and E. M. van Rikxoort, " Robust segmentation and anatomical labeling of the airway tree from thoracic CT scans.," Medical Image Computing and Computer Assisted Intervention (LNCS, New York, 2008), Vol. 5241, pp. 219-226.
27. E. M. van Rikxoort, M. Prokop, B. J. de Hoop, M. A. Viergever, J. P. W. Pluim, and B. van Ginneken, " Automatic segmentation of pulmonary lobes robust against incomplete fissures.," IEEE Trans. Med. Imaging 29 (6), 1286-1296 (2010). 10.1109/TMI.2010.2044799
28. P. Lo, J. Sporring, H. Ashraf, J. J. H. Pedersen, and M. de Bruijne, " Vessel-guided airway tree segmentation: A voxel classification approach.," Med. Image Anal. 14 (4), 527-538 (2010). 10.1016/j.media.2010. 03.004
29. A. M. R. Schilham, B. van Ginneken, H. Gietema, and M. Prokop, " Local noise weighted filtering for emphysema scoring of low-dose CT images.," IEEE Trans. Med. Imaging 25, 451-463 (2006). 10.1109/TMI.2006. 871545
30. S. Klein, M. Staring, K. Murphy, M. A. Viergever, and J. P. W. Pluim, " Elastix: A toolbox for intensity-based medical image registration.," IEEE Trans. Med. Imaging 29 (1), 196-205 (2010). 10.1109/TMI.2009.2035616
31. http:// elastix.isi.uu.nl
32. M. Staring, S. Klein, J. H. C. Reiber, W. J. Niessen, and B. C. Stoel, " Pulmonary image registration with elastix using a standard intensity-based algorithm.," Medical Image Analysis for the Clinic: A Grand Challenge (CreateSpace, Beijing, 2010), pp. 73-79.
33. T. Yamamoto, S. Kabus, T. Klinder, C. Lorenz, J. von Berg, T. Blaffert, B. W. Loo, Jr., and P. J. Keall, " Investigation of four-dimensional computed tomography-based pulmonary ventilation imaging in patients with emphysematous lung regions.," Phys. Med. Biol. 56 (7) (2011).
34. T. Yamamoto, S. Kabus, T. Klinder, J. von Berg, C. Lorenz, B. W. Loo, and P. J. Keall, " Four-dimensional computed tomography pulmonary ventilation images vary with deformable image registration algorithms and metrics.," Med. Phys. 38, 1348-1358 (2011). 10.1118/1.3547719
35. T. Yamamoto, S. Kabus, J. von Berg, C. Lorenz, and P. J. Keall, " Impact of four-dimensional computed tomography pulmonary ventilation imaging-based functional avoidance for lung cancer radiotherapy.," Int. J. Radiat. Oncol., Biol., Phys. 79, 279-288 (2011). 10.1016/j.ijrobp.2010.02.008
36. A. Busacker, J. D. Newell, T. Keefe, E. A. Hoffman, J. Cook Granroth, M. Castro, S. Fain, and S. Wenzel, " A multivariate analysis of risk factors for the air-trapping asthmatic phenotype as measured by quantitative CT analysis.," Chest 135 (1), 48-56 (2009). 10.1378/chest.08-0049
37. D. A. Lynch and J. D. Newell, " Quantitative imaging of COPD.," J. Thorac. Imaging 24 (3), 189-194 (2009). 10.1097/RTI.0b013e3181b31cf0
38. B. A. Simon, " Regional ventilation and lung mechanics using x-ray CT.," Acad. Radiol. 12, 1414-1422 (2005). 10.1016/j.acra.2005.07.009
39. R. Brower, R. A. Wise, C. Hassapoyannes, B. Bromberger-Barnea, and S. Permutt, " Effect of lung inflation on lung blood volume and pulmonary venous flow.," J. Appl. Physiol. 58 (3), 954-963 (1985). 10.1063/1.336172