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Volumn 75, Issue 6, 2012, Pages 1691-1700

Investigation of local primary structure effects on peroxynitrite-mediated tyrosine nitration using targeted mass spectrometry

Author keywords

MRM; Nitration; Nitrosative stress; Oxidative stress; PTM; Tandem mass spectrometry

Indexed keywords

AMINO ACID; PEROXYNITRITE; TYROSINE;

EID: 84857653860     PISSN: 18743919     EISSN: 18767737     Source Type: Journal    
DOI: 10.1016/j.jprot.2011.11.025     Document Type: Article
Times cited : (16)

References (26)
  • 1
    • 67650354415 scopus 로고    scopus 로고
    • Protein tyrosine nitration: Selectivity, physicochemical and biological consequences, denitration, and proteomics methods for the identification of tyrosine-nitrated proteins
    • Abello N., Kerstjens H.A.M., Postma D.S., Bischoff R. Protein tyrosine nitration: Selectivity, physicochemical and biological consequences, denitration, and proteomics methods for the identification of tyrosine-nitrated proteins. J Proteome Res 2009, 8:3222-3238.
    • (2009) J Proteome Res , vol.8 , pp. 3222-3238
    • Abello, N.1    Kerstjens, H.A.M.2    Postma, D.S.3    Bischoff, R.4
  • 3
    • 0038731081 scopus 로고    scopus 로고
    • Biological selectivity and functional aspects of protein tyrosine nitration
    • Ischiropoulos H. Biological selectivity and functional aspects of protein tyrosine nitration. Biochem Biophys Res Commun 2003, 305:776-783.
    • (2003) Biochem Biophys Res Commun , vol.305 , pp. 776-783
    • Ischiropoulos, H.1
  • 4
    • 0032147208 scopus 로고    scopus 로고
    • Biological tyrosine nitration: A pathophysiological function of nitric oxide and reactive oxygen species
    • Ischiropoulos H. Biological tyrosine nitration: A pathophysiological function of nitric oxide and reactive oxygen species. Arch Biochem Biophys 1998, 356:1-11.
    • (1998) Arch Biochem Biophys , vol.356 , pp. 1-11
    • Ischiropoulos, H.1
  • 5
    • 46649090918 scopus 로고    scopus 로고
    • Protein tyrosine nitration--functional alteration or just a biomarker?
    • Souza J.M., Peluffo G., Radi R. Protein tyrosine nitration--functional alteration or just a biomarker?. Free Radic Biol Med 2008, 45:357-366.
    • (2008) Free Radic Biol Med , vol.45 , pp. 357-366
    • Souza, J.M.1    Peluffo, G.2    Radi, R.3
  • 6
    • 0032715834 scopus 로고    scopus 로고
    • Nitric oxide and peroxynitrite. The ugly, the uglier and the not so good: a personal view of recent controversies
    • Halliwell B., Zhao K., Whiteman M. Nitric oxide and peroxynitrite. The ugly, the uglier and the not so good: a personal view of recent controversies. Free Radic Res 1999, 31:651-669.
    • (1999) Free Radic Res , vol.31 , pp. 651-669
    • Halliwell, B.1    Zhao, K.2    Whiteman, M.3
  • 7
    • 0029805172 scopus 로고    scopus 로고
    • Nitric oxide, superoxide, and peroxynitrite: the good, the bad, and ugly
    • Beckman J.S., Koppenol W.H. Nitric oxide, superoxide, and peroxynitrite: the good, the bad, and ugly. Am J Physiol 1996, 271:C1424-C1437.
    • (1996) Am J Physiol , vol.271
    • Beckman, J.S.1    Koppenol, W.H.2
  • 8
    • 0037237927 scopus 로고    scopus 로고
    • Oxidative stress and nitration in neurodegeneration: cause, effect, or association?
    • Ischiropoulos H., Beckman J.S. Oxidative stress and nitration in neurodegeneration: cause, effect, or association?. J Clin Invest 2003, 111:163-169.
    • (2003) J Clin Invest , vol.111 , pp. 163-169
    • Ischiropoulos, H.1    Beckman, J.S.2
  • 9
    • 0014194993 scopus 로고
    • Conversion of 3-nitrotyrosine to 3-aminotyrosine in peptides and proteins
    • Sokolovsky M., Riordan J.F., Vallee B.L. Conversion of 3-nitrotyrosine to 3-aminotyrosine in peptides and proteins. Biochem Biophys Res Commun 1967, 27:20-25.
    • (1967) Biochem Biophys Res Commun , vol.27 , pp. 20-25
    • Sokolovsky, M.1    Riordan, J.F.2    Vallee, B.L.3
  • 10
    • 42949134909 scopus 로고    scopus 로고
    • The chemistry of peroxynitrite: implications for biological activity
    • Goldstein S., Merenyi G. The chemistry of peroxynitrite: implications for biological activity. Methods Enzymol 2008, 436:49-61.
    • (2008) Methods Enzymol , vol.436 , pp. 49-61
    • Goldstein, S.1    Merenyi, G.2
  • 11
    • 0029682870 scopus 로고    scopus 로고
    • Oxidative damage and tyrosine nitration from peroxynitrite
    • Beckman J.S. Oxidative damage and tyrosine nitration from peroxynitrite. Chem Res Toxicol 1996, 9:836-844.
    • (1996) Chem Res Toxicol , vol.9 , pp. 836-844
    • Beckman, J.S.1
  • 12
    • 0347117585 scopus 로고    scopus 로고
    • Aspects, mechanism, and biological relevance of mitochondrial protein nitration sustained by mitochondrial nitric oxide synthase
    • Elfering S.L., Haynes V.L., Traaseth N.J., Ettl A., Giulivi C. Aspects, mechanism, and biological relevance of mitochondrial protein nitration sustained by mitochondrial nitric oxide synthase. Am J Physiol Heart Circ Physiol 2004, 286:H22-H29.
    • (2004) Am J Physiol Heart Circ Physiol , vol.286
    • Elfering, S.L.1    Haynes, V.L.2    Traaseth, N.J.3    Ettl, A.4    Giulivi, C.5
  • 13
    • 58149291366 scopus 로고    scopus 로고
    • Factors that contribute to the misidentification of tyrosine nitration by shotgun proteomics
    • Stevens S.M., Prokai-Tatrai K., Prokai L. Factors that contribute to the misidentification of tyrosine nitration by shotgun proteomics. Mol Cell Proteomics 2008, 7:2442-2451.
    • (2008) Mol Cell Proteomics , vol.7 , pp. 2442-2451
    • Stevens, S.M.1    Prokai-Tatrai, K.2    Prokai, L.3
  • 15
    • 0033571792 scopus 로고    scopus 로고
    • JM, Daikhin E, Yudkoff M, Raman CS, Ischiropoulos H. Factors determining the selectivity of protein tyrosine nitration
    • Souza J. JM, Daikhin E, Yudkoff M, Raman CS, Ischiropoulos H. Factors determining the selectivity of protein tyrosine nitration. Arch Biochem Biophys 1999, 371:169-178.
    • (1999) Arch Biochem Biophys , vol.371 , pp. 169-178
    • Souza, J.1
  • 16
    • 0037108887 scopus 로고    scopus 로고
    • Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
    • Keller A., Nesvizhskii A.I., Kolker E., Aebersold R. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. Anal Chem 2002, 74:5383-5392.
    • (2002) Anal Chem , vol.74 , pp. 5383-5392
    • Keller, A.1    Nesvizhskii, A.I.2    Kolker, E.3    Aebersold, R.4
  • 17
    • 0042338362 scopus 로고    scopus 로고
    • A statistical model for identifying proteins by tandem mass spectrometry
    • Nesvizhskii A.I., Keller A., Kolker E., Aebersold R. A statistical model for identifying proteins by tandem mass spectrometry. Anal Chem 2003, 75:4646-4658.
    • (2003) Anal Chem , vol.75 , pp. 4646-4658
    • Nesvizhskii, A.I.1    Keller, A.2    Kolker, E.3    Aebersold, R.4
  • 18
    • 35649025639 scopus 로고
    • Spectrophotometry of proteins: Absorption spectra of tyrosine, tryptophan and their mixtures. II. estimation of tyrosine and tryptophan in proteins
    • Holiday E.R. Spectrophotometry of proteins: Absorption spectra of tyrosine, tryptophan and their mixtures. II. estimation of tyrosine and tryptophan in proteins. Biochem J 1936, 10:1795-1800.
    • (1936) Biochem J , vol.10 , pp. 1795-1800
    • Holiday, E.R.1
  • 19
    • 33749853607 scopus 로고    scopus 로고
    • A probability-based approach for high-throughput protein phosphorylation analysis and site localization
    • Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P. A probability-based approach for high-throughput protein phosphorylation analysis and site localization. Nat Biotechnol 2006, 24:1285-1292.
    • (2006) Nat Biotechnol , vol.24 , pp. 1285-1292
    • Beausoleil, S.A.1    Villen, J.2    Gerber, S.A.3    Rush, J.4    Gygi, S.P.5
  • 21
    • 80051653930 scopus 로고    scopus 로고
    • Selective chemoprecipitation and subsequent release of tagged species for the analysis of nitropeptides by liquid chromatography-tandem mass spectrometry
    • Prokai-Tatrai K., Guo J., Prokai L. Selective chemoprecipitation and subsequent release of tagged species for the analysis of nitropeptides by liquid chromatography-tandem mass spectrometry. Mol Cell Proteomics 2011, 10.
    • (2011) Mol Cell Proteomics , vol.10
    • Prokai-Tatrai, K.1    Guo, J.2    Prokai, L.3
  • 22
    • 5744223586 scopus 로고    scopus 로고
    • An improved model for prediction of retention times of tryptic peptides in ion pair reversed-phase HPLC
    • Krokhin O.V., Craig R., Spicer V., Ens W., Standing K.G., Beavis R.C., et al. An improved model for prediction of retention times of tryptic peptides in ion pair reversed-phase HPLC. Mol Cell Proteomics 2004, 3:908-919.
    • (2004) Mol Cell Proteomics , vol.3 , pp. 908-919
    • Krokhin, O.V.1    Craig, R.2    Spicer, V.3    Ens, W.4    Standing, K.G.5    Beavis, R.C.6
  • 23
    • 67649998964 scopus 로고    scopus 로고
    • Mechanisms of Peroxynitrite-Mediated Nitration of Tyrosine
    • Gunaydin H., Houk K.N. Mechanisms of Peroxynitrite-Mediated Nitration of Tyrosine. Chem Res Toxicol 2009, 22:894-898.
    • (2009) Chem Res Toxicol , vol.22 , pp. 894-898
    • Gunaydin, H.1    Houk, K.N.2
  • 24
    • 33745611162 scopus 로고    scopus 로고
    • Endogenously nitrated proteins in mouse brain: links to neurodegenerative disease
    • Sacksteder C.A., Qian W., Knyushko T.V., Wang H., Chin M.H., Lacan G., et al. Endogenously nitrated proteins in mouse brain: links to neurodegenerative disease. Biochemistry 2006, 45:8009-8022.
    • (2006) Biochemistry , vol.45 , pp. 8009-8022
    • Sacksteder, C.A.1    Qian, W.2    Knyushko, T.V.3    Wang, H.4    Chin, M.H.5    Lacan, G.6
  • 25
    • 0036088377 scopus 로고    scopus 로고
    • The sulfinator: Predicting tyrosine sulfation sites in protein sequences
    • Monigatti F., Gasteiger E., Bairoch A., Jung E. The sulfinator: Predicting tyrosine sulfation sites in protein sequences. Bioinformatics 2002, 18:769-770.
    • (2002) Bioinformatics , vol.18 , pp. 769-770
    • Monigatti, F.1    Gasteiger, E.2    Bairoch, A.3    Jung, E.4
  • 26
    • 0027410419 scopus 로고
    • Analysis of sequence requirements for protein tyrosine sulfation
    • Rosenquist G.L., Nicholas H.B. Analysis of sequence requirements for protein tyrosine sulfation. Protein Sci 1993, 2:215-222.
    • (1993) Protein Sci , vol.2 , pp. 215-222
    • Rosenquist, G.L.1    Nicholas, H.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.