A wide variety of diarrhea viruses circulating in pediatric patients in Thailand

Clinical Laboratory

Volumn 58, Issue 1-2, 2012, Pages 117-123

  Chaimongkol, Natthawan ^a   Khamrin, Pattara ^a   Suantai, Boonpa ^a   Saikhreang, Wilaiporn ^a   Thongprachum, Aksara ^b   Malasao, Rungnapa ^a   Ukarapol, Nuthapong ^a   Kongsricharoern, Tipachan ^c   Ushijima, Hiroshi ^b   Maneekarn, Niwat ^a  

^a Faculty of Medicine Chiang Mai University   (Thailand)

^b GRADUATE SCHOOL OF MEDICINE   (Japan)

^c NAKORNPING HOSPITAL   (Thailand)

Author keywords

Diarrhea; Epidemiology; Gastroenteritis viruses

Indexed keywords

ADENOVIRUS; ARTICLE; ASTROVIRUS; ASTROVIRUS INFECTION; BOCAVIRUS INFECTION; CHILD; CHILDHOOD DISEASE; DISEASE SURVEILLANCE; ENTEROVIRUS; FECES ANALYSIS; HUMAN; HUMAN ROTAVIRUS; KOBUVIRUS; MIXED INFECTION; NONHUMAN; NOROVIRUS; PARECHOVIRUS; PRESCHOOL CHILD; PREVALENCE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; ROTAVIRUS INFECTION; SAPOVIRUS; THAILAND; VIRAL GASTROENTERITIS;

ACUTE DISEASE; CHILD, PRESCHOOL; DIARRHEA, INFANTILE; FECES; GASTROENTERITIS; HUMANS; INFANT; RNA VIRUS INFECTIONS; RNA VIRUSES; RNA, VIRAL; THAILAND; TIME FACTORS;

EID: 84857389942     PISSN: 14336510     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (50)

1. Snyder JD, Merson MH. The magnitude of the global problem of acute diarrhoeal disease: a review of active surveillance data. Bull World Health Organ 1982;60:605-13. (Pubitemid 13200473)
2. Kasper DL, Braunwald E, Fauci AS, Hauser SL, Longo DL, Jameson JL. Harrison's Principles of Internal Medicine. New York: McGraw-Hill, 2005. ISBN 0-07-139140-1.
3. Sdiri-Loulizi K, Gharbi-Khélifi H, de Rougemont A, et al. Acute infantile gastroenteritis associated with human enteric viruses in Tunisia. J Clin Microbiol 2008;46:1349-55. (Pubitemid 351563578)
4. Lyman WH, Walsh JF, Kotch JB, Weber DJ, Gunn E, Vinjé J. Prospective study of etiologic agents of acute gastroenteritis outbreaks in child care centers. J Pediatr 2009;154:253-7.
5. Thornton AC, Jennings-Conklin KS, McCormick MI. Noroviruses: agents in outbreaks of acute gastroenteritis. Disaster Manag Response 2004;2:4-9. (Pubitemid 38153007)
6. Parashar UD, Hummelman EG, Bresee JS, Miller MA, Glass RI. Global illness and deaths caused by rotavirus disease in children. Emerg Infect Dis 2003;9:565-72. (Pubitemid 36529515)
7. Parashar UD, Gibson CJ, Bresse JS, Glass RI. Rotavirus and severe childhood diarrhea. Emerg Infect Dis 2006;12:304-6.
8. Parashar UD, Burton A, Lanata C, et al. Global mortality associated with rotavirus disease among children in 2004. J Infect Dis2009;200:S9-S15.
9. Estes MK, Kapikian AZ. Rotaviruses. In: Knipe DM, Howley PM, Griffin DE, et al. (eds). Fields Virology, 5th ed. Philadelphia, PA: Lippintcott Williams, 2007:1917-74.
10. Kelkar SD, Zade JK. Group B rotaviruses similar to strain CAL-1, have been circulating in Western India since 1993. Epidemiol Infect 2004;132:745-9. (Pubitemid 39140107)
11. Khamrin P, Peerakome S, Malasao R, et al. Genetic characterization of group C rotavirus isolated from a child hospitalized with acute gastroenteritis in Chiang Mai, Thailand. Virus Genes 2008;37:314-21.
12. Atmar RL, Estes MK. The epidemiologic and clinical importance of norovirus infection. Gastroenterol Clin North Am 2006;35:275-90. (Pubitemid 44118664)
13. Green KY, Chanock RM, Kapikian AZ. Human caliciviruses. In: Knipe DM, Howley PM (eds). Fields Virology, 4th ed. Philadelphia: Lippincott Williams & Wilkins, 2001:841-74.
14. Mendez E, Arias CF. Astroviruses. In: Knipe DM, Howley PM, Griffin DE, et al. (eds). Fields virology, 5th ed. Philadelphia: Lippincott Williams &Wilkins, 2007:981-1000.
15. Vasiskova P, Dvorska L, Lorenkova A, Pavlik I. Viruses as causes of foodbome diseases: a review of the literature. Vet Med 2005;50:89-104. (Pubitemid 40615153)
16. Wilhelmi I, Roman E, Sánchez-Fauquier A. Viruses causing gastroenteritis. Clin Microbiol Infect 2003;9:247-62. (Pubitemid 36546383)
17. Lennon G, Cashman O, Lane K, Cryan B, O'Shea H. Prevalence and characterization of enteric adenoviruses in the South of Ireland. J Med Virol 2007;79:1518-26. (Pubitemid 47328741)
18. Phan TG, Nguyen TA, Shimizu H, et al. Identification of enteroviral infection among infants and children admitted to hospital with acute gastroenteritis in Ho Chi Minh City, Vietnam. J Med Virol 2005;77:257-64. (Pubitemid 41285796)
19. Pham NTK, Khamrin P, Nguyen TA, et al. Isolation and molecular characterization of Aichi viruses from fecal specimens collected in Japan, Bangladesh, Thailand, and Vietnam. J Clin Microbiol 2007;45:2287-8. (Pubitemid 47203810)
20. van der Sanden S, de Bruin E, Vennema H, Swanink C, Koopmans M, van der Avoort H. Prevalence of human parechovirus in the Netherlands in 2000 to 2007. J Clin Microbiol 2008;46:2884-9.
21. Allander T. Human bocavirus. J Clin Virol 2008;41:29-33.
22. Ambert-Balay K, Lorrot M, Bon F, et al. Prevalence and genetic diversity of Aichi virus strains in stool samples from community and hospitalized patients. J Clin Microbiol 2008;46:1252-8. (Pubitemid 351563564)
23. Louisirirotchanakul S, Wasi C, Satrasook S, Surakhaka M, Thongcharoen P. Rotavirus in pediatric diarrhoea at Siriraj Hospital, Bangkok, Thailand. Southeast Asian J Trop Med Public Health 1984;15:348-53.
24. Herrmann JE, Blacklow NR, Perron-Henry DM, Clements E, Taylor DN, Echeverria P. Incidence of enteric adenoviruses among children in Thailand and the significance of these viruses in gastroenteritis. J Clin Microbiol 1988;26:1783-6.
25. Herrmann JE, Taylor DN, Echeverria P, Blacklow NR. Astroviruses as a cause of gastroenteritis in children. N Engl J Med 1991;324:1757-60.
26. Maneekarn N, Ushijima H. Epidemiology of rotavirus infection in Thailand. Pediatr Int 2000;42:415-21.
27. Guntapong R, Hansman GS, Oka T, et al. Norovirus and sapovirus infections in Thailand. Jpn J Infect Dis 2004;57:276-8. (Pubitemid 40260247)
28. Jiraphongsa C, Bresee JS, Pongsuwanna Y, et al. Epidemiology and burden of rotavirus diarrhea in Thailand: results of sentinel surveillance. J Infect Dis 2005;192:1S87-93.
29. Khamrin P, Peerakome S, Wongsawasdi L, et al. Emergence of human G9 rotavirus with an exceptionally high frequency in children admitted to hospital with diarrhea in Chiang Mai, Thailand. J Med Virol 2006;78:273-80. (Pubitemid 43132572)
30. Khamrin P, Peerakome S, Tonusin S, et al. Changing pattern of rotavirus G genotype distribution in Chiang Mai, Thailand from 2002 to 2004: decline of G9 and reemergence of G1 and G2. J Med Virol 2007;79:1775-82. (Pubitemid 47479896)
31. Khamrin P, Maneekarn N, Peerakome S, et al. Genetic diversity of noroviruses and sapoviruses in children hospitalized with acute gastroenteritis in Chiang Mai, Thailand. J Med Virol 2007;79:1921-6. (Pubitemid 350006319)
32. Malasao R, Maneekarn N, Khamrin P, et al. 2008. Genetic diversity of norovirus, sapovirus, and astrovirus isolated from children hospitalized with acute gastroenteritis in Chiang Mai, Thailand. J Med Virol 80:1749-55.
33. Kittigul L, Pombubpa K, Taweekate Y, Yeephoo T, Khamrin P, Ushijima H. Molecular characterization of rotaviruses, noroviruses, sapovirus, and adenoviruses in patients with acute gastroenteritis in Thailand. J Med Virol 2009;81:345-53.
34. Khamrin P, Maneekarn N, Thongprachum A, Chaimongkol N, Okitsu S, Ushijima H. Emergence of new norovirus variants and genetic heterogeneity of noroviruses and sapoviruses in children admitted to hospital with diarrhea in Thailand. J Med Virol 2010;82:289-96.
35. Zoll GJ, Melchers WJ, Kopecka H, Jambroes G, van der Poel HJ, Galama JM. General primer-mediated polymerase chain reaction for detection of enteroviruses: application for diagnostic routine and persistent infections. J Clin Microbiol 1992;30:160-5.
36. Joki-Korpela P, Hyypiä T. Diagnosis and epidemiology of echovirus 22 infections. Clin Infect Dis 1998;27:129-36. (Pubitemid 28334431)
37. Yamashita T, Sugiyama M, Tsuzuki H, Sakae K, Suzuki Y, Miyazaki Y. Application of a reverse transcription-PCR for identification and differentiation of Aichi virus, a new member of the Picornavirus family associated with gastroenteritis in humans. J Clin Microbiol 2000;38:2955-61. (Pubitemid 30640580)
38. Yan H, Yagyu F, Okitsu S, Nishio O, Ushijima H. Detection of norovirus (GI, GII), Sapovirus and astrovirus in fecal samples using reverse transcription single-round multiplex PCR. J Virol Methods 2003;114:37-44. (Pubitemid 37340119)
39. Yan H, Nguyen TA, Phan TG, et al. Development of RT-multiplex PCR assay for detection of adenovirus and group A and C rotaviruses in diarrheal fecal specimens from children in China. Kansenshogaku Zasshi 2004;78:699-709.
40. Allander T, Tammi MT, Eriksson M, Bjerkner A, Tiveljung-Lindell A, Andersson B. Cloning of a human parvovirus by molecular screening of respiratory tract samples. Proc Natl Acad Sci USA 2005;102:12891-6. (Pubitemid 41279460)
41. Ren L, Gonzalez R, Xiao Y, et al. Saffold cardiovirus in children with acute gastroenteritis, Beijing, China. Emerging Infect Dis 2009;15:1509-11.
42. Li L, Victoria J, Kapoor A, et al. A novel Picornavirus associated with gastroenteritis. J Virol 2009;83:12002-6.
43. Holtz LR, Finkbeiner SR, Zhao G, et al. Klassevirus 1, a previously undescribed member of the family Picornaviridae, is globally widespread. Virol J 2009;6:86.
44. Dey SK, Ushijima H, Phathammavong O, et al. Seasonal trend and serotype distribution of rotavirus infection in Japan, 1981-2008. Pediatr Infect Dis J 2010;29:166-7.
45. Fodha I, Chouikha A, Peenze I, et al. Identification of viral agents causing diarrhea among children in the Eastern Center of Tunisia. J Med Virol 2006;78:1198-203. (Pubitemid 44182236)
46. Chen SM, Ni YH, Chen HL, Chang MH. Microbial etiology of acute gastroenteritis in hospitalized children in Taiwan. J Formos Med Assoc 2006;105:964-70.
47. Nguyen TA, Yagyu F, Okame M, et al. Diversity of viruses associated with acute gastroenteritis in children hospitalized with diarrhea in Ho Chi Minn City, Vietnam. J Med Virol 2007;79:582-90. (Pubitemid 46564357)
48. Fabiana A, Donia D, Gabrieli R, et al. Influence of enteric viruses on gastroenteritis in Albania: epidemiological and molecular analysis. J Med Virol 2007;79:1844-9. (Pubitemid 350006309)
49. Hansman GS, Katayama K, Maneekarn N, et al. Genetic diversity of norovirus and sapovirus in hospitalized infants with sporadic cases of acute gastroenteritis in Chiang Mai, Thailand. J Clin Microbiol 2004;42:1305-7. (Pubitemid 38332875)
50. Finkbeiner SR, Allred AF, Tarr PI, Klein EJ, Kirkwood CD, Wang D. Metagenomic analysis of human diarrhea: viral detection and discovery. PLoS Pathog 2008;4:e1000011.