Regional patterns of evolutionary turnover in Neogene coral reefs from the central Indo-West Pacific Ocean

Evolutionary Ecology

Volumn 26, Issue 2, 2012, Pages 375-391

  Bromfield, Kate ^a,b   Pandolfi, John M ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b UNIVERSITY OF TASMANIA   (Australia)

Author keywords

Faunal turnover; Indo Pacific; Scleractinia

Indexed keywords

BIODIVERSITY; CORAL REEF; ENVIRONMENTAL CHANGE; EXTINCTION; FACILITATION; FRAGMENTATION; GENETIC DIFFERENTIATION; GLACIATION; MIOCENE; NEOGENE; NORTHERN HEMISPHERE; OCEANOGRAPHY; PALEOENVIRONMENT; PLIOCENE-PLEISTOCENE BOUNDARY; SEA LEVEL CHANGE;

INDIAN OCEAN; PACIFIC OCEAN; PACIFIC OCEAN (WEST); PAPUA NEW GUINEA;

ANTHOZOA; SCLERACTINIA;

EID: 84857360338     PISSN: 02697653     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10682-011-9483-9     Document Type: Article

References (112)

1. Barber PH (2009) The challenge of understanding the coral triangle. J Biogeogr 36: 1845-1846.
2. Baron-Szabo RC (2006) Corals of the K/T-boundary: scleractinian corals of the suborders Astrocoeniina, Faviina, Rhipidogyrina and Amphiastraeina. J Syst Palaeontol 4(1): 1-108.
3. Bromfield K, Renema W (2011) Comparison of Sr/Sr isotope and biostratigraphic ages of uplifted fossil reefs in the Indo-Pacific: Indonesia, Papua New Guinea and Fiji. Aust J Earth Sci 58(1): 61-87.
4. Budd AF (2000) Diversity and extinction in the cenozoic history of Caribbean reefs. Coral Reefs 19(1): 25-35.
5. Budd AF, Johnson KG (1999) Origination preceding extinction during late cenozoic turnover of Caribbean reefs. Paleobiology 25(2): 188-200.
6. Budd AF, Stemann TA, Johnson KG (1994) Stratigraphic distributions of Neogene to Recent Caribbean reef corals: a new compilation. J Paleontol 68: 951-959.
7. Budd AF, Johnson KG, Stemann TA (1996) Plio-pleistocene turnover and extinctions in the Caribbean reef-coral fauna. In: Jackson JBC, Budd AF, Coates A (eds) Evolution and environment in tropical America. The University of Chicago Press, Chicago, pp 168-204.
8. Budd AF, Petersen R, McNeill DF (1998) Stepwise faunal change during evolutionary turnover: a case study from the Neogene of Curacao, Netherlands Antilles. Palaios 13: 170-188.
9. Budd AF, Foster CTJ, Adrain T, Dawson JP (2006) Neogene marine biota of tropical America. World wide website at http://nmita. geology. uiowa. edu.
10. Bunje PME, Lindberg DR (2007) Lineage divergence of a freshwater snail clade associated with post-Tethys marine basin development. Mol Phylogenet Evol 42(2): 373-387.
11. Chao A (1984) Non-parametric estimation of the number of classes in a population. Scand J Stat 11: 265-270.
12. Chao A (1987) Estimating the population size for capture-recapture data with unequal catchability. Biometrics 43(4): 783-791.
13. Chao A, Hwang W-H, Chen Y-C, Kuo C-Y (2000) Estimating the number of shared species in two communities. Statistica Sinica 10: 227-246.
14. Charlton TR (2000) Tertiary evolution of the eastern Indonesian collision complex. J Asian Earth Sci 18(5): 603-631.
15. Chazdon RL, Colwell RK, Denslow JS, Guariguata MR (1998) Statistical methods for estimating species richness of woody regeneration in primary and secondary rain forests of NE Costa Rica. In: Dallmeier F, Comiskey JA (eds) Forest biodiversity research, monitoring and modelling: conceptual background and old world case studies. Parthenon Publishing, Paris, pp 285-309.
16. Chevalier JP, Beauvis L (1987) Systematique. In: Grasse P-P (ed) Traite de Zoologie: Cnidaires. Masson.
17. Coates A, Jackson JBC, Collins LS, Cronin TM, Dowsett HJ, Bybell LM, Jung P, Obando JA (1992) Closure of the Isthmus of Panama: the near-shore marine record of Costa Rica and western Panama. Geol Soc Am Bull 104: 814-828.
18. Collins LS, Budd AF, Coates A (1996) Earliest evolution associated with closure of the tropical American Seaway. Proc Natl Acad Sci USA 93: 6069-6072.
19. Colwell RK (2005) EstimateS: statistical estimation of species richness and shared species from samples. Version 7. 5. user's guide and application published at http://purl. oclc. org/estimates.
20. Colwell RK, Coddingham JA (1996) Estimating terrestrial biodiversity through extrapolation. In: Hawksworth DL (ed) Biodiversity: measurement and estimation. Chapman and Hall, London.
21. Colwell RK, Mao CX, Chang J (2004) Interpolating, extrapolating, and comparing incidence-based species accumulation curves. Ecology 85(10): 2717-2727.
22. Dana JD (1846) Zoophytes. Volume VII of the United States exploring expedition. During the years 1838, 1839, 1840, 1841, 1842. Under the command of Charles Wilkes. Lea and Blanchard, Philadelphia.
23. Edinger EN, Risk MJ (1994) Oligocene-Miocene extinction and geographic restriction of Caribbean corals: roles of turbidity, temperature, and nutrients. Palaios 9(6): 576-598.
24. Edinger EN, Risk MJ (1995) Preferential survivorship of brooding corals in a regional extinction. Paleobiology 21(2): 200-219.
25. Elburg MA, van Leeuwen T, Foden J, Muhardjo (2002) Origin of geochemical variability by arc-continent collision in the Biru Area, Southern Sulawesi (Indonesia). J Petrol 43(4): 581-606.
26. Felix J (1898) Beitrage zur Kenntniss der Astrocoeninae. Deut geol Ges Zeitschr 1: 247-256 pl 11.
27. Felix J (1913) Die fossilen Anthozoen aus der Umgegend von Trinil. Palaeontographica 60: 311-365.
28. Felix J (1915) Jungtertiäre und quartäre Anthozoën von Timor und Obi I. Theil. Paläontologie von Timor 2: 3-45.
29. Felix J (1921) Fossile Anthozoën von Borneo. Paläontologie von Timor 9(15): 1-61.
30. Filipelli GM, Flores J-A (2009) From the warm pliocene to the cold pleistocene: a tale of two oceans. Geology 37(10): 959-960.
31. Gerth H (1921a) Coelenterata. Sammlungen des geologischen Reichs-Museums in Leiden. Neue Folge 1(2): 387-445.
32. Gerth H (1921b) Die Anthozoen der Dyas von Timor. Paläontologie von Timor 9: 67-147.
33. Gerth H (1923) Die Anthozoenfauna des Jungtertiärs von Borneo. Serie 1. Sammlungen des geologischen Reichs-Museums in Leiden. Neue Folge 10: 37-136.
34. Gerth H (1925) Jungtertiäre Korallen von Nias, Java und Borneo, nebst einer Uebersicht über die as dem Känozoikum des Indischen Archipels bekannten Arten. Leidsche Geologische Mededeelingen 1(1): 22-82.
35. Gerth H (1930) The evolution of reefcorals during the Cenozoic period. In: Proceedings of the fourth pacific congress, Java, 1929 2(a): 333-350.
36. Gradstein FM, Ogg JG, Smith AG, Agterberg FP, Bleeker W, Cooper RA, Davydov V, Bibbard P, Hinnov LA, House MR, Lourens LJ, Luterbacher H-P, McArthur JM, Melchin MJ, Robb LJ, Shergold J, Villeneuve M, Wardlaw BR, Ali JR, Brinkhuis H, Hilgen FJ, Hooker J, Howarth RJ, Knoll AH, Laskar J, Monechi S, Powell J, Plumb KA, Raffi I, Rohl U, Sanfilippo A, Schmitz B, Shackleton NJ, Shields GA, Strauss H, van Dam J, Veizer J, van Kolfschoten Th, Wilson D (2004) A geological time scale. Cambridge University Press, Cambridge.
37. Hall R (2001) Cenozoic reconstructions of SE Asia and the SW Pacific: changing patterns of land and sea. In: Metcalfe I, Smith JMB, Moorwood M, Davidson ID (eds) Faunal and floral migrations and evolution in SE Asia-Australasia. Swets & Zeitlinger Publishers, Lisse, pp 35-56.
38. Hall R (2002) Cenozoic geological and plate tectonic evolution of SE Asia and the SW Pacific. J Asian Earth Sci 20(4): 353-434.
39. Hall R, Wilson MEJ (2000) Neogene sutures in Eastern Indonesia. J Asian Earth Sci 18: 781-808.
40. Haq B, Hardenbol J, Vail PR (1987) Chronology of fluctuating sea level since the Triassic. Science 235: 1156-1166.
41. Harzhauser M, Piller WE, Steininger FF (2002) Circum-Mediterranean oligo-Miocene biogeographic evolution-the gastropods' point of view. Palaeogeogr Palaeoclimatol Palaeoecol 183(1-2): 103-133.
42. Hoeksema BW (2007) Delineation of the Indo-Malayan centre of maximum marine biodiversity: the coral triangle. In: Renema W (ed) Biogeography, time and place: distributions, barriers and islands. Springer, Dordrecht, pp 117-178.
43. Hoffmeister JE (1942) Fossil corals from Viti Levu, Fiji. Bernice P. Bishop Museum-Bulletin 119: 154-157.
44. Holbourn A, Kuhnt W, Schulz M, Erlenkeuser H (2005) Impacts of orbital forcing and atmospheric carbon dioxide on Miocene ice-sheet expansion. Nature 438(7067): 483-487.
45. Holbourn A, Kuhnt W, Schulz M, Flores J-A, Andersen N (2007) Orbitally-paced climate evolution during the middle Miocene "Monterey" carbon-isotope excursion. Earth Planet Sci Lett 261: 534-550.
46. Jackson JBC, Johnson KG (2000) Life in the last few million years. Paleobiology 26(4): 221-235.
47. Jackson JBC, Jung P, Coates AG, Collins LS (1995) Diversity and extinction of tropical American molluscs and emergence of the Isthmus of Panama. Science 260: 1624-1626.
48. Jackson JBC, Budd AF, Pandolfi JM (1996) The shifting balance of natural communities? In: Jablonski D, Erwin DH, Lipps JH (eds) Evolutionary paleobiology. The University of Chicago Press, Chicago, pp 89-122.
49. Johnson KG (2001) Middle Miocene recovery of Caribbean reef corals: new data from the Tamana formation, Trinidad. J Paleontol 75(3): 513-526.
50. Johnson KG, Kirby MX (2006) The Emprador limestone rediscovered: early Miocene corals from the Culebra Formation, Panama. J Paleontol 80(2): 283-293.
51. Johnson KG, Budd AF, Stemann TA (1995) Extinction selectivity and ecology of Neogene Caribbean reef corals. Paleobiology 21(1): 52-73.
52. Jones D, Hasson P (1985) History and development of the marine invertebrate faunas separated by the Central American isthmus. In: Stehli FG, Webb S (eds) The Great American biotic interchange. Plenum Press, New York, pp 325-355.
53. Klaus JS, McNeill DF, Budd AF, Johnson KG (2008) Assessing community change in miocene to pliocene coral assemblages of the Northern Dominican Republic. In: Nehm RH, Budd AF (eds) Evolutionary stasis and change in the Dominican Republic Neogene. Springer Science + Business Media B. V.
54. Koswara A, Panggabean H, Baharuddin DS (1994) Geological map of the Bonerate Sheet, South Sulawesi, Scale 1: 250, 000. Geological Survey Indonesia, Bandung.
55. Kuhnt W, Holbourn A, Hall R, Zuvela M, Kase R (2004) Neogene history of the Indonesian throughflow. Continent-ocean interactions within East Asian marginal seas. Geophys Monogr Ser 149: 299-320.
56. Lamarck JB (1801) Systeme des animaux sans vertebres. Paris.
57. Lamarck JB (1816) Histoire naturelle des animaux sans vertèbres. Paris.
58. Lindley D (1988) Early cainozoic stratigraphy and structure of the Gazelle Peninsula, east New Britain: an example of extensional tectonics in the New Britain arc-trench complex. Aust J Earth Sci 35: 231-244.
59. Marshall CR (1990) Confidence intervals on stratigraphic ranges. Paleobiology 16(1): 1-10.
60. Marshall CR (1994) Confidence intervals on stratigraphic ranges: partial relaxation of the assumption of randomly distributed fossil horizons. Paleobiology 20(4): 459-469.
61. Martin K (1880) Corallia, Foraminifera. In: Martin K (ed) Die Tertiärschichten auf Java. Nach den entdeckungen von Fr. Junghuhn. Brill, Leiden, pp 132-164.
62. Michelin H (1840-1847) Iconographie zoophytologique. Description par localités et terrains des ploypiers fossiles de France. Paris.
63. Milne Edwards H, Haime J (1848) Recherches sur les polypiers; deuxième mémoire. Monographie des Turbinolides. Annu Soc Natl Paris Zoölogie 3(9): 211-344.
64. Mora C, Chittaro PM, Sale PF, Kritzer JP, Ludsin SA (2003) Patterns and processes in reef fish diversity. Nature 421: 933-936.
65. Mudelsee M, Raymo ME (2005) Slow dynamics of the Northern Hemisphere glaciation. Paleoceanography 20: PA4022.
66. Naish TR, Wilson GS (2009) Constraints on the amplitude of Mid-Pliocene (3. 6-2. 4 Ma) eustatic sea-level fluctuations from the New Zealand shallow-marine sediment record. Philos Trans R Soc A 367(1886): 169-188.
67. O'Dea A, Jackson JBC (2009) Environmental change drove macroevolution in cupuladriid bryozoans. Proc R Soc B 276: 3629-3634.
68. O'Dea A, Jackson JBC, Fortunato H, Smith T, D'Croz L, Johnson KG, Todd JA (2007) Environmental change preceded Caribbean extinction by 2 million years. Proc Natl Acad Sci USA 104(13): 5501-5506.
69. Orbigny AD (1849) Note sur des polpiers fossiles. Victor Masson, Paris.
70. Osberger R (1946) Research on fossil corals from Java. Geological Dept. Faculty of Science, University of Indonesia, Bandung.
71. Pandolfi JM (1993) A review of the tectonic history of New Guinea and its significance for marine biology, vol 2. In: Proceedings of the seventh international reef symposium, pp 718-727.
72. Potts DC (1983) Evolutionary disequilibrium among Indo-Pacific corals. Bull Mar Sci 33(3): 619-632.
73. Quelch JJ (1886) Report on the reef-corals collected by H. M. S. challenger during the years 1873-76. Report on the scientific results of the voyage of the H. M. S. Challenger during the years 1873-76 (Zoology). no. 16, p 208.
74. Ravelo AC, Andreasen DH, Lyle M, Lyle AO, Wara MW (2004) Regional climate shifts caused by gradual global cooling in the Pliocene epoch. Nature 429: 263-267.
75. Raymo ME (1994) The initiation of Northern Hemisphere glaciation. Annu Rev Earth Planet Sci 22: 353-383.
76. Raymo ME, Grant B, Horowitz M, Rau GH (1996) Mid-Pliocene warmth: stronger greenhouse and stronger conveyor. Mar Micropaleontol 27: 313-326.
77. Rebesco M, Camerlenghi A (2008) Late Pliocene margin development and mega debris flow deposits on the Antarctic continental margins: evidence of the onset of the modern Antarctic ice sheet? Palaeogeogr Palaeoclimatol Palaeoecol 260: 149-167.
78. Renema W, Bellwood DR, Braga JC, Bromfield K, Hall R, Johnson KG, Lunt P, Meyer CP, McMonagle LB, Morley RJ, O'Dea A, Todd JA, Wesselingh FP, Wilson ME, Pandolfi JM (2008) Hopping hotspots: global shifts in marine biodiversity. Science 321: 654-657.
79. Reuss AE (1867) Über fossile Korallen der Insel Java. Reise der Oesterreichischen Fregatte Novara um die Erde in den Jahren 1857, 1858, 1859. Geologischer Theil 2: 165-185.
80. Reyes-Bonilla H (2002) Checklist of valid names and synonyms of stony corals (Anthozoa: Scleractinia) from the eastern Pacific. J Nat Hist 36: 1-13.
81. Roberts CM, McClean CJ, Veron JEN, Hawkins JP, Allen GR, McAllister DE, Mittermeier CG, Schueler FW, Spalding M, Well F, Vynne C, Werner TB (2002) Marine biodiversity hotspots and conservation priorities for tropical reefs. Science 295(5558): 1280-1284.
82. Rodda P (1994) Geology of Fiji. In: Stevenson AJ, Herzer RH, Ballance PF (eds) Geology and submarine resources of the Tonga-Lau-Fiji region. SOPAC technical bulletin, Suva. pp 131-151.
83. Rogl F (1999) Mediterranean and Paratethys. Facts and hypotheses of an Oligocene to Miocene paleogeography (short overview). Geologica Carpathica 50(4): 339-349.
84. Rogl F, Steininger FF (1984) Neogene Paratethys, Mediterranean and Indo-Pacific seaways. In: Brenchley PJ (ed) Fossils and climate. Wiley, New York, pp 171-200.
85. Rosen BR (1984) Reef coral biogeography and climate through the late cainozoic; just islands in the sun or a critical pattern of islands. In: Brenchley PJ (ed) Fossils and climate. Wiley, New York, pp 201-262.
86. Rosen BR (1988) Progress, problems and patterns in the biostratigraphy of reef corals and other tropical marine organisms. Helgolander Meeresuntersuchungen 42: 269-301.
87. Rosen BR, Smith AB (1988) Tectonics from fossils? Analysis of reef-coral and sea-urchin distributions from late cretaceous to recent, using a new method. In: Audley-Charles MG, Hallam A (eds) Gondwana and Tethys. Geol Soc Lond Special Publ, pp 275-306.
88. Sadler PM (2004) Quantitative biostratigraphy-achieving finer resolution in global correlation. Annu Rev Earth Planet Sci 32: 187-213.
89. Stehli FG, Wells JW (1971) Diversity and age patterns in hermatypic corals. Syst Zool 20: 115-126.
90. Sukamto R, Supriatna S (1982) The geology of the Ujung Pandang, Benteng and Sinjai quadrangles, Sulawesi. In Geological Research and Development Centre.
91. Umbgrove JHF (1939) Miocene corals from flores (East Indies). Leidse Geologische Mededelingen 11: 62-67.
92. Umbgrove JHF (1942) Corals from asphalt deposits of the island Buton (East Indies). Leidse Geologische Mededelingen 29-38: 12-13.
93. Umbgrove JHF (1945) Corals from the upper Miocene of Tjisande, Java. In: Proceedings of the Koninklijke Nederlandse Akademie van Wetenschappen (1990), vol 48, pp 340-344.
94. Umbgrove JHF (1946a) Corals from a lower Pliocene patch reef in Central Java. J Paleontol 20(6): 521-542.
95. Umbgrove JHF (1946b) Evolution of reef corals in East Indies since Miocene time. Bull Am Assoc Petrol Geol 30(1): 23-31.
96. Umbgrove JHF (1950) Corals from the Putjangan Beds (Lower Pleistocene) of Java. J Paleontol 24(6): 637-651.
97. Vaughan TW, Wells JW (1943) Revision of the suborders families, and genera of the scleractinia. Geol Soc Am.
98. Veron JEN, Kelly R (1988) Species stability in reef corals of Papua New Guinea and the Indo Pacific. Association of Australian Palaeontologists, Moorooka.
99. Veron JEN, Pichon M (1976) Scleractinia of Eastern Australia Part 1. Australian Government Printing Service, Canberra.
100. Veron JEN, Pichon M (1979) Scleractinia of Eastern Australia Part 3. Australian National University Press, Canberra.
101. Veron JEN, Pichon M (1982) Scleractinia of Eastern Australia Part 4. Australian National University Press, Canberra.
102. Veron JEN, Wallace CC (1984) Scleractinia of Eastern Australia Part 5. Australian National University Press, Canberra.
103. Veron JEN, Pichon M, Wijsman-Best M (1977) Scleractinia of Eastern Australia Part 2. Australian Government Publishing Service, Canberra.
104. Verrill AE (1865) List of polyps and corals sent by the Museum of Comparative Zoology to other institutions in exchange, with annotations. Bull Mus Compar Zool 1: 29-60.
105. Wara MW, Ravelo AC, Delaney ML (2005) Permanent El Nino-like conditions during the Pliocene warm period. Science 309: 758-761.
106. Warny SA, Askin RA, Hannah MJ, Mohr BAR, Raine JI, Harwood DM, Florindo F (2009) Palynomorphs from a sediment core reveal a sudden remarkably warm Antarctica during the middle Miocene. Geology 37(10): 955-958.
107. Wells JW (1956) Scleractinia. Pp. F328-F444. In: Moore RC, (ed) Treatise on invertebrate paleontology. Geological Society of America and University of Kansas Press.
108. Wilson MEJ (1995) The Tonasa limestone formation, Sulawesi, Indonesia: development of a tertiary carbonate platform. University of London, London.
109. Wilson MEJ (2002) Cenozoic carbonates in Southeast Asia: implications for equatorial carbonate development. Sed Geol 147: 295-428.
110. Wilson MEJ (2008) Global and regional influences on equatorial shallow-marine carbonates during the Cenozoic. Palaeogeogr, Palaeoclimatol, Palaeoecol 265(3-4): 262-274.
111. Wilson MEJ, Rosen BR (1998) Implications of paucity of corals in the Paleogene of SE Asia: plate tectonics or centre of origin? In: Hall RH (ed) Biogeography and geological evolution of SE Asia. Backbuys Publishers, Leiden, pp 165-195.
112. Zachos JC, Pagani M, Sloan L, Thomas E, Billups K (2001) Trends, rhythms and aberrations in global climate 65 Ma to present. Science 292: 686-693.