The origin and differentiation process of X and y chromosomes of the black marsh turtle (Siebenrockiella crassicollis, Geoemydidae, Testudines)

Chromosome Research

Volumn 20, Issue 1, 2012, Pages 95-110

  Kawagoshi, Taiki ^a,b   Nishida, Chizuko ^b   Matsuda, Yoichi ^a  

^a NAGOYA UNIVERSITY   (Japan)

^b HOKKAIDO UNIVERSITY   (Japan)

Author keywords

centromere repositioning; chromosome homology; comparative mapping; gene order; repetitive sequence; sex chromosomes; Testudines

Indexed keywords

ARTICLE; CHROMOSOME MAP; CHROMOSOME PAINTING; DNA PROBE; DNA SEQUENCE; NUCLEOTIDE SEQUENCE; PELODISCUS SINENSIS; PRIORITY JOURNAL; SIEBENROCKIELLA CRASSICOLLIS; TURTLE; X CHROMOSOME; Y CHROMOSOME;

ANIMALS; CENTROMERE; CHICKENS; CHROMOSOME MAPPING; CHROMOSOME PAINTING; CLONING, MOLECULAR; COMPARATIVE GENOMIC HYBRIDIZATION; EVOLUTION, MOLECULAR; GENE ORDER; GENETIC LINKAGE; MOLECULAR SEQUENCE DATA; REPETITIVE SEQUENCES, NUCLEIC ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID; SEX DIFFERENTIATION; TURTLES; X CHROMOSOME; Y CHROMOSOME;

GEOEMYDIDAE; PELODISCUS SINENSIS; SIEBENROCKIELLA; SIEBENROCKIELLA CRASSICOLLIS; TESTUDINES; TRIONYCHIDAE;

EID: 84857359432     PISSN: 09673849     EISSN: 15736849     Source Type: Journal    
DOI: 10.1007/s10577-011-9267-7     Document Type: Article

References (38)

1. JF Armstrong K Pritchard-Jones WA Bickmore ND Hastie JB Bard 1992 The expression of the Wilms' tumour gene, WT1, in the developing mammalian embryo Mech Dev 40 85 97 10.1016/0925-4773(93)90090-K
2. M Ayres MM Sampaio RMS Barros LB Dias OR Cunha 1969 A karyological study of turtles from the Brazilian Amazon region Cytogenetics 8 401 409 5365245 10.1159/000130051 1:STN:280:DyaE3c%2FosFWmtg%3D%3D
3. JW Bickham RJ Baker 1976 Chromosome homology and evolution of emydid turtles Chromosoma 54 201 219 1248339 10.1007/BF00293451 1:STN:280: DyaE287hsleksA%3D%3D
4. JW Bickham JJ Bull JM Legler 1983 Karyotypes and evolutionary relationships of trionychoid turtles Cytologia 48 177 183 10.1508/cytologia.48. 177
5. JJ Bull RG Moon JM Legler 1974 Male heterogamety in kinosternid turtles (genus Staurotypus) Cytogenet Cell Genet 13 419 425 4462978 10.1159/000130295 1:STN:280:DyaE2M7os1CitA%3D%3D
6. JL Carr JW Bickham 1981 Sex-chromosomes of the Asian black pond turtle, Siebenrockiella crassicollis (Testudines: Emydidae) Cytogenet Cell Genet 31 178 183 7326996 10.1159/000131644 1:STN:280:DyaL387hs1artQ%3D%3D
7. JL Carr JW Bickham 1986 Phylogenetic implications of karyotypic variation in the Batagurinae (Testudines: Emydidae) Genetica 70 89 106 10.1007/BF00123580
8. T Ezaz N Valenzuela F Grützner I Miura A Georges RL Burke JA Graves 2006 An XX/XY sex microchromosome system in a freshwater turtle, Chelodina longicollis (Testudines: Chelidae) with genetic sex determination Chromosome Res 14 139 150 16544188 10.1007/s10577-006-1029-6 1:CAS:528:DC%2BD28XisFOgurc%3D
9. DA Haber RL Sohn AJ Buckler J Pelletier KM Call DE Housman 1991 Alternative splicing and genomic structure of the Wilms tumor gene WT1 Proc Natl Acad Sci USA 88 9618 9622 1658787 10.1073/pnas.88.21.9618 1:CAS:528: DyaK3sXhslagug%3D%3D
10. G Head RM May L Pendleton 1987 Environmental determination of sex in the reptiles Nature (London) 329 198 199 10.1038/329198a0
11. N Iwabe Y Hara Y Kumazawa K Shibamoto Y Saito T Miyata K Katoh 2005 Sister group relationship of turtles to the bird-crocodilian clade revealed by nuclear DNA-coded proteins Mol Biol Evol 22 810 813 15625185 10.1093/molbev/msi075 1:CAS:528:DC%2BD2MXjtFais74%3D
12. A Janke D Erpenbeck M Nilsson U Arnason 2001 The mitochondrial genomes of the iguana (Iguana iguana) and the caiman (Caiman crocodylus): implications for amniote phylogeny Proc R Soc Lond B 268 623 631 10.1098/rspb.2000.1402 1:CAS:528:DC%2BD3MXjt1WjtLc%3D
13. T Kawagoshi N Nishida H Ota Y Kumazawa H Endo Y Matsuda 2008 Molecular structures of centromeric heterochromatin and karyotypic evolution in the Siamese crocodile (Crocodylus siamensis) (Crocodylidae, Crocodylia) Chromosome Res 16 1119 1132 18941916 10.1007/s10577-008-1263-1 1:CAS:528:DC%2BD1cXhsFarsrfM
14. T Kawagoshi Y Uno K Matsubara Y Matsuda C Nishida 2009 The ZW micro-sex chromosomes of the Chinese soft-shelled turtle (Pelodiscus sinensis, Trionychidae, Testudines) have the same origin as chicken chromosome 15 Cytogenet Genome Res 125 125 131 19729916 10.1159/000227837 1:STN:280: DC%2BD1MngtlGitQ%3D%3D
15. A Kawai C Nishida-Umehara J Ishijima Y Tsuda H Ota Y Matsuda 2007 Different origins of bird and reptile sex chromosomes inferred from comparative mapping of chicken Z-linked genes Cytogenet Genome Res 117 92 102 17675849 10.1159/000103169 1:CAS:528:DC%2BD2sXosFKisLk%3D
16. A Kawai J Ishijima C Nishida A Kosaka H Ota S Kohno Y Matsuda 2009 The ZW sex chromosomes of Gekko hokouensis (Gekkonidae, Squamata) represent highly conserved homology with those of avian species Chromosoma 118 43 51 18685858 10.1007/s00412-008-0176-2
17. Killebrew 1977 Mitotic chromosomes of turtles Tex J Sci 29 245 253
18. JA Kreidberg H Sariola JM Loring M Maeda J Pelletier D Housman R Jaenisch 1993 WT-1 is required for early kidney development Cell 74 679 691 8395349 10.1016/0092-8674(93)90515-R 1:CAS:528:DyaK3sXlsFKrurg%3D
19. Y Kumazawa M Nishida 1999 Complete mitochondrial DNA sequences of the green turtle and blue-tailed mole skink: statistical evidence for Archosaurian affinity of turtles Mol Biol Evol 16 784 792 10368956 1:CAS:528: DyaK1MXjslGitbo%3D
20. BY Lee TD Kocher 2007 Exclusion of Wilms tumour (WT1b) and ovarian cytochrome P450 aromatase (CYP19A1) as candidates for sex determination genes in Nile tilapia (Oreochromis niloticus) Anim Genet 38 85 86 17257199 10.1111/j.1365-2052.2007.01563.x 1:CAS:528:DC%2BD2sXjsVehs7o%3D
21. PA Martinez T Ezaz N Valenzuela A Georges JA Marshall Graves 2008 An XX/XY heteromorphic sex chromosome system in the Australian chelid turtle Emydura macquarii: a new piece in the puzzle of sex chromosome evolution in turtles Chromosome Res 16 815 825 18679815 10.1007/s10577-008-1228-4 1:CAS:528:DC%2BD1cXhtFWlsbnO
22. K Matsubara C Nishida-Umehara A Kuroiwa K Tsuchiya Y Matsuda 2003 Identification of chromosome rearrangements between the laboratory mouse (Mus musculus) and the Indian spiny mouse (Mus platythrix) by comparative FISH analysis Chromosome Res 11 57 64 12675306 10.1023/A:1022010116287 1:CAS:528:DC%2BD3sXlslertw%3D%3D
23. Y Matsuda VM Chapman 1995 Application of fluorescence in situ hybridization in genome analysis of the mouse Electrophoresis 16 261 272 7774567 10.1002/elps.1150160142 1:CAS:528:DyaK2MXktVGkurY%3D
24. Y Matsuda C Nishida-Umehara H Tarui, et al. 2005 Highly conserved linkage homology between birds and turtles: bird and turtle chromosomes are precise counterparts of each other Chromosome Res 13 601 615 16170625 10.1007/s10577-005-0986-5 1:CAS:528:DC%2BD2MXhtVWiu7vI
25. K McBee JW Bickham AGJ Rhodin RA Mittermeier 1985 Karyotypic variation in the genus Platemys (Testudines, Pleurodira) Copeia 2 445 449 10.2307/1444856
26. G Montefalcone S Tempesta M Rocchi N Archidiacono 1999 Centromere repositioning Genome Res 9 1184 1188 10613840 10.1101/gr.9.12.1184 1:CAS:528:DC%2BD3cXivV2rsg%3D%3D
27. Olmo E, Signorino G (2005) Chromorep: a reptile chromosomes database. Internet references. Retrieved from: http://193.206.118.100/professori/ chromorep.pdf
28. RR Rackley AM Flenniken NP Kuriyan PM Kessler MH Stoler BRG Williams 1993 Expression of the Wilms' tumor suppressor gene WT1 during mouse embryogenesis Cell Growth Different 4 1023 1031 1:CAS:528:DyaK2cXis1Kmt7Y%3D
29. JS Rest JC Ast CC Austin PJ Waddell EA Tibbetts JM Hay DP Mindell 2003 Molecular systematics of primary reptilian lineages and the tuatara mitochondrial genome Mol Phylogent Evol 29 289 297 10.1016/S1055-7903(03)00108-8 1:CAS:528:DC%2BD3sXnt1amtro%3D
30. SG Roberts 2005 Transcriptional regulation by WT1 in development Curr Opin Genet Dev 15 542 547 16099645 10.1016/j.gde.2005.08.004 1:CAS:528:DC%2BD2MXpvFenurg%3D
31. JA Ross CL Peichel 2008 Molecular cytogenetic evidence of rearrangements on the Y chromosome of the threespine stickleback fish Genetics 179 2173 2182 18689886 10.1534/genetics.108.088559
32. SD Sarre A Georges A Quinn 2004 The ends of a continuum: genetic and temperature-dependent sex determination in reptiles BioEssays 26 639 645 15170861 10.1002/bies.20050
33. Sharma GP, Kaur P, Nakhasi U (1975) Female heterogamety in the Indian crytodiran Chelonian, Kachuga Smithi. Gray In Tiwari KK, Srivistava CB, eds. Dr. B.S. Chauhan Commemoration Volume 359-368. Zoological Society of India, Orissa
34. LD Spotila JR Spotila SE Hall 1998 Sequence and expression analysis of Wt1 and Sox9 in the red-eared slider turtle, Trachemys scripta J Exp Zool 281 417 427 9662829 10.1002/(SICI)1097-010X(19980801)281:5<417::AID-JEZ7>3.0. CO;2-R 1:CAS:528:DyaK1cXks1aqsrw%3D
35. AT Sumner 1972 A simple technique for demonstrating centromeric heterochromatin Exp Cell Res 75 304 306 4117921 10.1016/0014-4827(72)90558-7 1:STN:280:DyaE3s%2FkslGitA%3D%3D
36. N Valenzuela 2007 Relic thermosensitive gene expression in a turtle with genotypic sex determination Evolution 62 234 240 18053078 10.1111/j.1558-5646. 2007.00279.x
37. Valenzuela N, Lance V (eds) (2004) Temperature-dependent sex determination in vertebrates. Smithonian Books, Washington
38. LH Wong KHA Choo 2001 Centromere on the move Genome Res 11 513 516 11282966 10.1101/gr.183901 1:CAS:528:DC%2BD3MXivFOqtLs%3D