-
3
-
-
75349111165
-
Probiotic bacteria influence the composition and function of the intestinal microbiota
-
O'Toole PW, Cooney JC, (2008) Probiotic bacteria influence the composition and function of the intestinal microbiota. Interdiscip Perspect Infect Dis 2008: 175285.
-
(2008)
Interdiscip Perspect Infect Dis
, vol.2008
, pp. 175285
-
-
O'Toole, P.W.1
Cooney, J.C.2
-
4
-
-
0034831139
-
Probiotic bacteria enhance murine and human intestinal epithelial barrier function
-
Madsen K, Cornish A, Soper P, McKaigney C, Jijon H, et al. (2001) Probiotic bacteria enhance murine and human intestinal epithelial barrier function. Gastroenterology 121: 580-591.
-
(2001)
Gastroenterology
, vol.121
, pp. 580-591
-
-
Madsen, K.1
Cornish, A.2
Soper, P.3
McKaigney, C.4
Jijon, H.5
-
5
-
-
77953232963
-
Intestinal and immunological effects of daily oral administration of Lactobacillus salivarius CECT5713 to healthy adults
-
Sierra S, Lara-Villoslada F, Sempere L, Olivares M, Boza J, et al. (2010) Intestinal and immunological effects of daily oral administration of Lactobacillus salivarius CECT5713 to healthy adults. Anaerobe 16: 195-200.
-
(2010)
Anaerobe
, vol.16
, pp. 195-200
-
-
Sierra, S.1
Lara-Villoslada, F.2
Sempere, L.3
Olivares, M.4
Boza, J.5
-
6
-
-
79954421746
-
Modulatory effects of Lactobacillus salivarius on intestinal mucosal immunity of piglets
-
Zhang J, Deng J, Wang Z, Che C, Li YF, et al. (2011) Modulatory effects of Lactobacillus salivarius on intestinal mucosal immunity of piglets. Curr Microbiol 62: 1623-1631.
-
(2011)
Curr Microbiol
, vol.62
, pp. 1623-1631
-
-
Zhang, J.1
Deng, J.2
Wang, Z.3
Che, C.4
Li, Y.F.5
-
7
-
-
23344446928
-
Probiotics reduce enterohemorrhagic Escherichia coli O157:H7- and enteropathogenic E. coli O127:H6-induced changes in polarized T84 epithelial cell monolayers by reducing bacterial adhesion and cytoskeletal rearrangements
-
Sherman PM, Johnson-Henry KC, Yeung HP, Ngo PS, Goulet J, et al. (2005) Probiotics reduce enterohemorrhagic Escherichia coli O157:H7- and enteropathogenic E. coli O127:H6-induced changes in polarized T84 epithelial cell monolayers by reducing bacterial adhesion and cytoskeletal rearrangements. Infect Immun 73: 5183-5188.
-
(2005)
Infect Immun
, vol.73
, pp. 5183-5188
-
-
Sherman, P.M.1
Johnson-Henry, K.C.2
Yeung, H.P.3
Ngo, P.S.4
Goulet, J.5
-
8
-
-
33947368650
-
A five-strain probiotic combination reduces pathogen shedding and alleviates disease signs in pigs challenged with Salmonella enterica Serovar Typhimurium
-
Casey PG, Gardiner GE, Casey G, Bradshaw B, Lawlor PG, et al. (2007) A five-strain probiotic combination reduces pathogen shedding and alleviates disease signs in pigs challenged with Salmonella enterica Serovar Typhimurium. Appl Environ Microbiol 73: 1858-1863.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 1858-1863
-
-
Casey, P.G.1
Gardiner, G.E.2
Casey, G.3
Bradshaw, B.4
Lawlor, P.G.5
-
9
-
-
74249119678
-
Obesity and the human microbiome
-
Ley RE, (2010) Obesity and the human microbiome. Curr Opin Gastroenterol 26: 5-11.
-
(2010)
Curr Opin Gastroenterol
, vol.26
, pp. 5-11
-
-
Ley, R.E.1
-
10
-
-
0031781603
-
Inflammatory bowel disease: etiology and pathogenesis
-
Fiocchi C, (1998) Inflammatory bowel disease: etiology and pathogenesis. Gastroenterology 115: 182-205.
-
(1998)
Gastroenterology
, vol.115
, pp. 182-205
-
-
Fiocchi, C.1
-
11
-
-
78751698624
-
Predominant genera of fecal microbiota in children with atopic dermatitis are not altered by intake of probiotic bacteria Lactobacillus acidophilus NCFM and Bifidobacterium animalis subsp. lactis Bi-07
-
Larsen N, Vogensen FK, Gobel R, Michaelsen KF, Abu Al-Soud W, et al. (2011) Predominant genera of fecal microbiota in children with atopic dermatitis are not altered by intake of probiotic bacteria Lactobacillus acidophilus NCFM and Bifidobacterium animalis subsp. lactis Bi-07. FEMS Microbiol Ecol 75: 482-496.
-
(2011)
FEMS Microbiol Ecol
, vol.75
, pp. 482-496
-
-
Larsen, N.1
Vogensen, F.K.2
Gobel, R.3
Michaelsen, K.F.4
Abu Al-Soud, W.5
-
12
-
-
34250622074
-
Bacteriocin production as a mechanism for the antiinfective activity of Lactobacillus salivarius UCC118
-
Corr SC, Li Y, Riedel CU, O'Toole PW, Hill C, et al. (2007) Bacteriocin production as a mechanism for the antiinfective activity of Lactobacillus salivarius UCC118. Proc Natl Acad Sci U S A 104: 7617-7621.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 7617-7621
-
-
Corr, S.C.1
Li, Y.2
Riedel, C.U.3
O'Toole, P.W.4
Hill, C.5
-
13
-
-
33646232504
-
Multireplicon genome architecture of Lactobacillus salivarius
-
Claesson MJ, Li Y, Leahy S, Canchaya C, van Pijkeren JP, et al. (2006) Multireplicon genome architecture of Lactobacillus salivarius. Proc Natl Acad Sci U S A 103: 6718-6723.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 6718-6723
-
-
Claesson, M.J.1
Li, Y.2
Leahy, S.3
Canchaya, C.4
van Pijkeren, J.P.5
-
14
-
-
42249106613
-
Predominance of a bacteriocin-producing Lactobacillus salivarius component of a five-strain probiotic in the porcine ileum and effects on host immune phenotype
-
Walsh MC, Gardiner GE, Hart OM, Lawlor PG, Daly M, et al. (2008) Predominance of a bacteriocin-producing Lactobacillus salivarius component of a five-strain probiotic in the porcine ileum and effects on host immune phenotype. FEMS Microbiol Ecol 64: 317-327.
-
(2008)
FEMS Microbiol Ecol
, vol.64
, pp. 317-327
-
-
Walsh, M.C.1
Gardiner, G.E.2
Hart, O.M.3
Lawlor, P.G.4
Daly, M.5
-
15
-
-
33745134051
-
Comparative and functional analysis of sortase-dependent proteins in the predicted secretome of Lactobacillus salivarius UCC118
-
van Pijkeren JP, Canchaya C, Ryan KA, Li Y, Claesson MJ, et al. (2006) Comparative and functional analysis of sortase-dependent proteins in the predicted secretome of Lactobacillus salivarius UCC118. Appl Environ Microbiol 72: 4143-4153.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 4143-4153
-
-
van Pijkeren, J.P.1
Canchaya, C.2
Ryan, K.A.3
Li, Y.4
Claesson, M.J.5
-
16
-
-
16544395360
-
Relative ability of orally administered Lactobacillus murinus to predominate and persist in the porcine gastrointestinal tract
-
Gardiner GE, Casey PG, Casey G, Lynch PB, Lawlor PG, et al. (2004) Relative ability of orally administered Lactobacillus murinus to predominate and persist in the porcine gastrointestinal tract. Appl Environ Microbiol 70: 1895-1906.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 1895-1906
-
-
Gardiner, G.E.1
Casey, P.G.2
Casey, G.3
Lynch, P.B.4
Lawlor, P.G.5
-
17
-
-
34249871146
-
Salivaricin P, one of a family of two-component antilisterial bacteriocins produced by intestinal isolates of Lactobacillus salivarius
-
Barrett E, Hayes M, O'Connor P, Gardiner G, Fitzgerald GF, et al. (2007) Salivaricin P, one of a family of two-component antilisterial bacteriocins produced by intestinal isolates of Lactobacillus salivarius. Appl Environ Microbiol 73: 3719-3723.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 3719-3723
-
-
Barrett, E.1
Hayes, M.2
O'Connor, P.3
Gardiner, G.4
Fitzgerald, G.F.5
-
18
-
-
0035161173
-
Selection of a potential probiotic Lactobacillus strain and subsequent in vivo studies
-
Chang YH, Kim JK, Kim HJ, Kim WY, Kim YB, et al. (2001) Selection of a potential probiotic Lactobacillus strain and subsequent in vivo studies. Antonie Van Leeuwenhoek 80: 193-199.
-
(2001)
Antonie Van Leeuwenhoek
, vol.80
, pp. 193-199
-
-
Chang, Y.H.1
Kim, J.K.2
Kim, H.J.3
Kim, W.Y.4
Kim, Y.B.5
-
19
-
-
77953230366
-
Regulation of abdominal adiposity by probiotics (Lactobacillus gasseri SBT2055) in adults with obese tendencies in a randomized controlled trial
-
Kadooka Y, Sato M, Imaizumi K, Ogawa A, Ikuyama K, et al. (2010) Regulation of abdominal adiposity by probiotics (Lactobacillus gasseri SBT2055) in adults with obese tendencies in a randomized controlled trial. Eur J Clin Nutr 64: 636-643.
-
(2010)
Eur J Clin Nutr
, vol.64
, pp. 636-643
-
-
Kadooka, Y.1
Sato, M.2
Imaizumi, K.3
Ogawa, A.4
Ikuyama, K.5
-
20
-
-
26244468974
-
Preventative effects of a probiotic, Lactobacillus salivarius ssp. salivarius, in the TNBS model of rat colitis
-
Peran L, Camuesco D, Comalada M, Nieto A, Concha A, et al. (2005) Preventative effects of a probiotic, Lactobacillus salivarius ssp. salivarius, in the TNBS model of rat colitis. World J Gastroenterol 11: 5185-5192.
-
(2005)
World J Gastroenterol
, vol.11
, pp. 5185-5192
-
-
Peran, L.1
Camuesco, D.2
Comalada, M.3
Nieto, A.4
Concha, A.5
-
21
-
-
79955794476
-
Comparative fecal metagenomics unveils unique functional capacity of the swine gut
-
Lamendella R, Domingo JW, Ghosh S, Martinson J, Oerther DB, (2011) Comparative fecal metagenomics unveils unique functional capacity of the swine gut. BMC Microbiol 11: 103.
-
(2011)
BMC Microbiol
, vol.11
, pp. 103
-
-
Lamendella, R.1
Domingo, J.W.2
Ghosh, S.3
Martinson, J.4
Oerther, D.B.5
-
22
-
-
78449296237
-
Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors
-
Benson AK, Kelly SA, Legge R, Ma F, Low SJ, et al. (2010) Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors. Proc Natl Acad Sci U S A 107: 18933-18938.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 18933-18938
-
-
Benson, A.K.1
Kelly, S.A.2
Legge, R.3
Ma, F.4
Low, S.J.5
-
23
-
-
0036230805
-
Characterization of the genetic locus responsible for the production of ABP-118, a novel bacteriocin produced by the probiotic bacterium Lactobacillus salivarius subsp. salivarius UCC118
-
Flynn S, van Sinderen D, Thornton GM, Holo H, Nes IF, et al. (2002) Characterization of the genetic locus responsible for the production of ABP-118, a novel bacteriocin produced by the probiotic bacterium Lactobacillus salivarius subsp. salivarius UCC118. Microbiology 148: 973-984.
-
(2002)
Microbiology
, vol.148
, pp. 973-984
-
-
Flynn, S.1
van Sinderen, D.2
Thornton, G.M.3
Holo, H.4
Nes, I.F.5
-
24
-
-
0028990155
-
Bacteriocins of gram-positive bacteria
-
Jack RW, Tagg JR, Ray B, (1995) Bacteriocins of gram-positive bacteria. Microbiol Rev 59: 171-200.
-
(1995)
Microbiol Rev
, vol.59
, pp. 171-200
-
-
Jack, R.W.1
Tagg, J.R.2
Ray, B.3
-
25
-
-
0027199706
-
Genetics of bacteriocins produced by lactic acid bacteria
-
Klaenhammer TR, (1993) Genetics of bacteriocins produced by lactic acid bacteria. FEMS Microbiol Rev 12: 39-85.
-
(1993)
FEMS Microbiol Rev
, vol.12
, pp. 39-85
-
-
Klaenhammer, T.R.1
-
26
-
-
79952834160
-
The activity of bacteriocins from Carnobacterium maltaromaticum UAL307 against gram-negative bacteria in combination with EDTA treatment
-
Martin-Visscher LA, Yoganathan S, Sit CS, Lohans CT, Vederas JC, (2011) The activity of bacteriocins from Carnobacterium maltaromaticum UAL307 against gram-negative bacteria in combination with EDTA treatment. FEMS Microbiol Lett 317: 152-159.
-
(2011)
FEMS Microbiol Lett
, vol.317
, pp. 152-159
-
-
Martin-Visscher, L.A.1
Yoganathan, S.2
Sit, C.S.3
Lohans, C.T.4
Vederas, J.C.5
-
27
-
-
79955585846
-
Isolation of Lactobacillus salivarius 1077 (NRRL B-50053) and characterization of its bacteriocin, including the antimicrobial activity spectrum
-
Svetoch EA, Eruslanov BV, Levchuk VP, Perelygin VV, Mitsevich EV, et al. (2011) Isolation of Lactobacillus salivarius 1077 (NRRL B-50053) and characterization of its bacteriocin, including the antimicrobial activity spectrum. Appl Environ Microbiol 77: 2749-2754.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 2749-2754
-
-
Svetoch, E.A.1
Eruslanov, B.V.2
Levchuk, V.P.3
Perelygin, V.V.4
Mitsevich, E.V.5
-
28
-
-
78650225949
-
New insights into Prevotella diversity and medical microbiology
-
Alauzet C, Marchandin H, Lozniewski A, (2010) New insights into Prevotella diversity and medical microbiology. Future Microbiol 5: 1695-1718.
-
(2010)
Future Microbiol
, vol.5
, pp. 1695-1718
-
-
Alauzet, C.1
Marchandin, H.2
Lozniewski, A.3
-
29
-
-
80055084408
-
Characterization and Scope of S-layer Protein O-Glycosylation in Tannerella forsythia
-
Posch G, Pabst M, Brecker L, Altmann F, Messner P, et al. (2011) Characterization and Scope of S-layer Protein O-Glycosylation in Tannerella forsythia. J Biol Chem 286: 38714-38724.
-
(2011)
J Biol Chem
, vol.286
, pp. 38714-38724
-
-
Posch, G.1
Pabst, M.2
Brecker, L.3
Altmann, F.4
Messner, P.5
-
30
-
-
33845593292
-
Identification of a novel, invasive, not-yet-cultivated Treponema sp. in the large intestine of pigs by PCR amplification of the 16S rRNA gene
-
Molbak L, Klitgaard K, Jensen TK, Fossi M, Boye M, (2006) Identification of a novel, invasive, not-yet-cultivated Treponema sp. in the large intestine of pigs by PCR amplification of the 16S rRNA gene. J Clin Microbiol 44: 4537-4540.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 4537-4540
-
-
Molbak, L.1
Klitgaard, K.2
Jensen, T.K.3
Fossi, M.4
Boye, M.5
-
32
-
-
56849106496
-
The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing
-
Dethlefsen L, Huse S, Sogin ML, Relman DA, (2008) The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing. PLoS Biol 6: e280.
-
(2008)
PLoS Biol
, vol.6
-
-
Dethlefsen, L.1
Huse, S.2
Sogin, M.L.3
Relman, D.A.4
-
33
-
-
69449093705
-
Alteration of the ileal microbiota of weanling piglets by the growth-promoting antibiotic chlortetracycline
-
Rettedal E, Vilain S, Lindblom S, Lehnert K, Scofield C, et al. (2009) Alteration of the ileal microbiota of weanling piglets by the growth-promoting antibiotic chlortetracycline. Appl Environ Microbiol 75: 5489-5495.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 5489-5495
-
-
Rettedal, E.1
Vilain, S.2
Lindblom, S.3
Lehnert, K.4
Scofield, C.5
-
35
-
-
84873799110
-
Studies on lysogenesis. I. The mode of phage liberation by lysogenic Escherichia coli
-
Bertani G, (1951) Studies on lysogenesis. I. The mode of phage liberation by lysogenic Escherichia coli. J Bacteriol 62: 293-300.
-
(1951)
J Bacteriol
, vol.62
, pp. 293-300
-
-
Bertani, G.1
-
36
-
-
0016686551
-
Improved medium for lactic streptococci and their bacteriophages
-
Terzaghi BE, Sandine WE, (1975) Improved medium for lactic streptococci and their bacteriophages. Appl Microbiol 29: 807-813.
-
(1975)
Appl Microbiol
, vol.29
, pp. 807-813
-
-
Terzaghi, B.E.1
Sandine, W.E.2
-
37
-
-
61849180908
-
Pediocin PA-1 and a pediocin producing Lactobacillus plantarum strain do not change the HMA rat microbiota
-
Bernbom N, Jelle B, Brogren CH, Vogensen FK, Nørrung B, et al. (2009) Pediocin PA-1 and a pediocin producing Lactobacillus plantarum strain do not change the HMA rat microbiota. Int J Food Microbiol 130: 251-257.
-
(2009)
Int J Food Microbiol
, vol.130
, pp. 251-257
-
-
Bernbom, N.1
Jelle, B.2
Brogren, C.H.3
Vogensen, F.K.4
Nørrung, B.5
-
38
-
-
78650453707
-
Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions
-
Claesson MJ, Wang Q, O'Sullivan O, Greene-Diniz R, Cole JR, et al. (2010) Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions. Nucleic Acids Res 38: e200.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Claesson, M.J.1
Wang, Q.2
O'Sullivan, O.3
Greene-Diniz, R.4
Cole, J.R.5
-
39
-
-
58149200948
-
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
-
Cole JR, Wang Q, Cardenas E, Fish J, Chai B, et al. (2009) The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res 37: D141-145.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Cole, J.R.1
Wang, Q.2
Cardenas, E.3
Fish, J.4
Chai, B.5
-
40
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, et al. (2010) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7: 335-336.
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
-
41
-
-
29144464937
-
UniFrac: a new phylogenetic method for comparing microbial communities
-
Lozupone C, Knight R, (2005) UniFrac: a new phylogenetic method for comparing microbial communities. Appl Environ Microbiol 71: 8228-8235.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
-
42
-
-
79961135005
-
R: A Language and Environment for Statistical Computing
-
R Development Core Team, Vienna, Austria: R Foundation for Statistical Computing. The R Project for Statistical Computing website. Available:. Accessed 2012 Jan 4
-
R Development Core Team (2011) R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing. The R Project for Statistical Computing website. Available: http://www.R-project.org. Accessed 2012 Jan 4.
-
(2011)
-
-
-
43
-
-
1142273091
-
Strong control, conservative point estimation and simultaneous conservative consistency of false discovery rates: a unified approach
-
Storey JD, (2004) Strong control, conservative point estimation and simultaneous conservative consistency of false discovery rates: a unified approach. Journal Of The Royal Statistical Society Series B 66: 187-205.
-
(2004)
Journal Of The Royal Statistical Society Series B
, vol.66
, pp. 187-205
-
-
Storey, J.D.1
-
44
-
-
0026499429
-
Conservation evaluation and phylogenetic diversity
-
Faith DP, (1992) Conservation evaluation and phylogenetic diversity. Biol Conserv 61: 1-10.
-
(1992)
Biol Conserv
, vol.61
, pp. 1-10
-
-
Faith, D.P.1
|