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Volumn 78, Issue 5, 2012, Pages 1332-1344

Phylogenetic diversities and community structure of members of the extremely halophilic Archaea (order Halobacteriales) in multiple saline sediment habitats

Author keywords

[No Author keywords available]

Indexed keywords

16S RRNA GENE; COMMUNITY STRUCTURES; GEOCHEMICAL CONDITIONS; GREAT SALT LAKE; HALOPHILIC ARCHAEA; HYPERSALINE; MANGROVE TREE; OKLAHOMA; PHYLOGENETIC DIVERSITY; PUERTO RICO; SALINE HABITATS; SALINE SEDIMENT; SALINITY FLUCTUATION; SALINITY LEVELS; SPRING-IN; WATERBODIES;

EID: 84857066705     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.07420-11     Document Type: Article
Times cited : (78)

References (67)
  • 1
    • 40449109197 scopus 로고    scopus 로고
    • Halorhabdus tiamatea sp. nov., a non-pigmented, extremely halophilic archaeon from a deep-sea, hypersaline anoxic basin of the Red Sea, and emended description of the genus Halorhabdus
    • Antunes A, et al. 2008. Halorhabdus tiamatea sp. nov., a non-pigmented, extremely halophilic archaeon from a deep-sea, hypersaline anoxic basin of the Red Sea, and emended description of the genus Halorhabdus. Int. J. Syst. Evol. Microbiol. 58:215-220
    • (2008) Int. J. Syst. Evol. Microbiol. , vol.58 , pp. 215-220
    • Antunes, A.1
  • 2
    • 46149122972 scopus 로고    scopus 로고
    • Prokaryotic diversity of a Tunisian multipond solar saltern
    • Baati H, et al. 2008. Prokaryotic diversity of a Tunisian multipond solar saltern. Extremophiles 12:505-518
    • (2008) Extremophiles , vol.12 , pp. 505-518
    • Baati, H.1
  • 3
    • 77956288145 scopus 로고    scopus 로고
    • Novel prokaryotic diversity in sediments of Tunisian multipond solar saltern
    • Baati H, Guermazi S, Gharsallah N, Sghir A, Ammar E. 2010. Novel prokaryotic diversity in sediments of Tunisian multipond solar saltern. Res. Microbiol. 161:573-582
    • (2010) Res. Microbiol. , vol.161 , pp. 573-582
    • Baati, H.1    Guermazi, S.2    Gharsallah, N.3    Sghir, A.4    Ammar, E.5
  • 4
    • 34248161550 scopus 로고    scopus 로고
    • Haloplanus natans gen. nov., an extremely halophilic, gas-vacuolate archaeon isolated from Dead Sea-Red Sea water mixtures in experimental outdoor ponds
    • Bardavid RE, Mana L, Oren A. 2007. Haloplanus natans gen. nov., an extremely halophilic, gas-vacuolate archaeon isolated from Dead Sea-Red Sea water mixtures in experimental outdoor ponds. Int. J. Syst. Evol. Microbiol. 57:780-783
    • (2007) Int. J. Syst. Evol. Microbiol. , vol.57 , pp. 780-783
    • Bardavid, R.E.1    Mana, L.2    Oren, A.3
  • 5
    • 72849108150 scopus 로고    scopus 로고
    • Microbial diversity of Great Salt Lake
    • Gunde-Cimerron, N, Oren A, Plemenita A (ed), Bacteria, and Eukarya. Springer, Dordrecht, The Netherlands
    • Baxter BK, et al. 2005. Microbial diversity of Great Salt Lake. In Gunde-Cimerron, N, Oren A, Plemenita A (ed), Adaptation to life at high salt concentrations in Archaea, Bacteria, and Eukarya. Springer, Dordrecht, The Netherlands
    • (2005) Adaptation to life at high salt concentrations in Archaea
    • Baxter, B.K.1
  • 6
    • 0035001161 scopus 로고    scopus 로고
    • Archaeal biodiversity in crystallizer ponds from a solar saltern: culture versus PCR
    • Benlloch S, et al. 2001. Archaeal biodiversity in crystallizer ponds from a solar saltern: culture versus PCR. Microb. Ecol. 41:12-19
    • (2001) Microb. Ecol. , vol.41 , pp. 12-19
    • Benlloch, S.1
  • 7
    • 0000286531 scopus 로고
    • An ordination of the upland forest communities of southern Wisconsin
    • Bray JR, Curtis TJ. 1957. An ordination of the upland forest communities of southern Wisconsin. Ecol. Monogr. 27:325-349
    • (1957) Ecol. Monogr. , vol.27 , pp. 325-349
    • Bray, J.R.1    Curtis, T.J.2
  • 8
    • 4444305820 scopus 로고    scopus 로고
    • Combined use of cultivation-dependent and cultivation-independent methods indicates that members of most haloarchaeal groups in an Australian crystallizer pond are cultivable
    • Burns DG, Camakaris HM, Janssen PH, Dyall-Smith ML. 2004. Combined use of cultivation-dependent and cultivation-independent methods indicates that members of most haloarchaeal groups in an Australian crystallizer pond are cultivable. Appl. Environ. Microbiol. 70:5258-5265
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 5258-5265
    • Burns, D.G.1    Camakaris, H.M.2    Janssen, P.H.3    Dyall-Smith, M.L.4
  • 9
    • 77952684604 scopus 로고    scopus 로고
    • Natronomonas moolapensis sp. nov., nonalkaliphilic isolates recovered from a solar saltern crystallizer pond, and emended description of the genus Natronomonas
    • Burns DG, et al. 2010. Natronomonas moolapensis sp. nov., nonalkaliphilic isolates recovered from a solar saltern crystallizer pond, and emended description of the genus Natronomonas. Int. J. Syst. Evol. Microbiol. 60:1173-1176
    • (2010) Int. J. Syst. Evol. Microbiol. , vol.60 , pp. 1173-1176
    • Burns, D.G.1
  • 10
    • 70350136692 scopus 로고    scopus 로고
    • Archaeal diversity at the Great Salt Plains of Oklahoma described by cultivation and molecular analyses
    • Caton TM, Caton IR, Witte LR, Schneegurt MA. 2009. Archaeal diversity at the Great Salt Plains of Oklahoma described by cultivation and molecular analyses. Microb. Ecol. 58:519-528
    • (2009) Microb. Ecol. , vol.58 , pp. 519-528
    • Caton, T.M.1    Caton, I.R.2    Witte, L.R.3    Schneegurt, M.A.4
  • 11
    • 0001463548 scopus 로고
    • Non-parametric estimation of the number of classes in a population
    • Chao A. 1984. Non-parametric estimation of the number of classes in a population. Scand. J. Stat. 11:265-270
    • (1984) Scand. J. Stat. , vol.11 , pp. 265-270
    • Chao, A.1
  • 12
    • 0344898137 scopus 로고    scopus 로고
    • Nonparametric estimation of Shannon's index of diversity when there are unseen species in sample
    • Chao A, Chen T-J. 2003. Nonparametric estimation of Shannon's index of diversity when there are unseen species in sample. Environ. Ecol. Stat. 10:429-443
    • (2003) Environ. Ecol. Stat. , vol.10 , pp. 429-443
    • Chao, A.1    Chen, T.-J.2
  • 13
    • 58149200948 scopus 로고    scopus 로고
    • The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
    • Cole JR, et al. 2009. The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res. 37:D141-D145
    • (2009) Nucleic Acids Res , vol.37
    • Cole, J.R.1
  • 14
    • 77955629564 scopus 로고    scopus 로고
    • Haloplanus vescus sp. nov, an extremely halophilic archaeon from a marine solar saltern, and emended description of the genus Haloplanus
    • Cui H-L, et al. 2010. Haloplanus vescus sp. nov, an extremely halophilic archaeon from a marine solar saltern, and emended description of the genus Haloplanus. Int. J. Syst. Evol. Microbiol. 60:1824-1827
    • (2010) Int. J. Syst. Evol. Microbiol. , vol.60 , pp. 1824-1827
    • Cui, H.-L.1
  • 15
    • 77953320385 scopus 로고    scopus 로고
    • Halogranum rubrum gen. nov., sp. nov., a halophilic archaeon isolated from a marine solar saltern
    • Cui H-L, et al. 2010. Halogranum rubrum gen. nov., sp. nov., a halophilic archaeon isolated from a marine solar saltern. Int. J. Syst. Evol. Microbiol. 60:1366-1371
    • (2010) Int. J. Syst. Evol. Microbiol. , vol.60 , pp. 1366-1371
    • Cui, H.-L.1
  • 16
    • 79955437095 scopus 로고    scopus 로고
    • Haloplanus aerogenes sp. nov., an extremely halophilic archaeon from a marine solar saltern
    • Cui H-L, Gao X, Yang X, Xu X-W. 2011. Haloplanus aerogenes sp. nov., an extremely halophilic archaeon from a marine solar saltern. Int. J. Syst. Evol. Microbiol. 61:965-968
    • (2011) Int. J. Syst. Evol. Microbiol. , vol.61 , pp. 965-968
    • Cui, H.-L.1    Gao, X.2    Yang, X.3    Xu, X.-W.4
  • 17
    • 79960167783 scopus 로고    scopus 로고
    • Halolamina pelagica gen. nov., sp. nov., a new member of the family Halobacteriaceae
    • Cui H-L, Gao X, Yang X, Xu XW. 2011. Halolamina pelagica gen. nov., sp. nov., a new member of the family Halobacteriaceae. Int. J. Syst. Evol. Microbiol. 61:1617-1621
    • (2011) Int. J. Syst. Evol. Microbiol. , vol.61 , pp. 1617-1621
    • Cui, H.-L.1    Gao, X.2    Yang, X.3    Xu, X.W.4
  • 18
    • 77956703903 scopus 로고    scopus 로고
    • Halopelagius inordinatus gen. nov., sp. nov., a new member of the family Halobacteriaceae isolated from a marine solar saltern
    • Cui H-L, et al. 2010. Halopelagius inordinatus gen. nov., sp. nov., a new member of the family Halobacteriaceae isolated from a marine solar saltern. Int. J. Syst. Evol. Microbiol. 60:2089-2093
    • (2010) Int. J. Syst. Evol. Microbiol. , vol.60 , pp. 2089-2093
    • Cui, H.-L.1
  • 19
    • 79955364983 scopus 로고    scopus 로고
    • Halogranum gelatinilyticum sp. nov., and Halogranum amylolyticum sp. nov., isolated from a marine solar saltern, and emended description of the genus Halogranum
    • Cui H-L, Xyang Gao X, Xu X-W. 2011. Halogranum gelatinilyticum sp. nov., and Halogranum amylolyticum sp. nov., isolated from a marine solar saltern, and emended description of the genus Halogranum. Int. J. Syst. Evol. Microbiol. 61:911-915
    • (2011) Int. J. Syst. Evol. Microbiol. , vol.61 , pp. 911-915
    • Cui, H.-L.1    Xyang Gao, X.2    Xu, X.-W.3
  • 20
    • 80355147280 scopus 로고    scopus 로고
    • Halobellus clavatus gen. nov., sp. nov. and Halorientalis regularis gen. nov., sp. nov., two new members of the family Halobacteriaceae
    • Cui H-L, Yang X, Gao X, Xu XW. 2011. Halobellus clavatus gen. nov., sp. nov. and Halorientalis regularis gen. nov., sp. nov., two new members of the family Halobacteriaceae. Int. J. Syst. Evol. Microbiol. 61:2682-2689
    • (2011) Int. J. Syst. Evol. Microbiol. , vol.61 , pp. 2682-2689
    • Cui, H.-L.1    Yang, X.2    Gao, X.3    Xu, X.W.4
  • 21
    • 78049409895 scopus 로고    scopus 로고
    • Halosarcina limi sp. nov., a halophilic archaeon from a marine solar saltern, and emended description of the genus Halosarcina
    • Cui HL, et al. 2010. Halosarcina limi sp. nov., a halophilic archaeon from a marine solar saltern, and emended description of the genus Halosarcina. Int. J. Syst. Evol. Microbiol. 60:2462-2466
    • (2010) Int. J. Syst. Evol. Microbiol. , vol.60 , pp. 2462-2466
    • Cui, H.L.1
  • 22
    • 33746061683 scopus 로고    scopus 로고
    • Greengenes a chimera-checked 16S rRNA gene database and workbench compatible with ARB
    • DeSantis TZ, et al. 2006. Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl. Environ. Microbiol. 72:5069-5072
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 5069-5072
    • DeSantis, T.Z.1
  • 23
    • 0030738803 scopus 로고    scopus 로고
    • Adaptive response of Haloferax mediterranei to low concentrations of NaCl (<20%) in the growth medium
    • D'Souza SE, Altekar W, D'Souza SF. 1997. Adaptive response of Haloferax mediterranei to low concentrations of NaCl (<20%) in the growth medium. Arch. Microbiol. 168:68-71
    • (1997) Arch. Microbiol. , vol.168 , pp. 68-71
    • D'Souza, S.E.1    Altekar, W.2    D'Souza, S.F.3
  • 24
    • 8444239817 scopus 로고    scopus 로고
    • Survey of archaeal diversity reveals abundance of halophilic archaea in a low-salt, anaerobic sulfur spring
    • Elshahed MS, et al. 2004. Survey of archaeal diversity reveals abundance of halophilic archaea in a low-salt, anaerobic sulfur spring. Appl. Environ. Microbiol. 70:2230-2239
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 2230-2239
    • Elshahed, M.S.1
  • 25
    • 9744226379 scopus 로고    scopus 로고
    • Haloferax sulfurifontis sp. nov., a halophilic archaeon isolated from a sulfide and sulfur-rich spring
    • Elshahed MS, et al. 2004. Haloferax sulfurifontis sp. nov., a halophilic archaeon isolated from a sulfide and sulfur-rich spring. Int. J. Syst. Evol. Microbiol. 54:2275-2279
    • (2004) Int. J. Syst. Evol. Microbiol. , vol.54 , pp. 2275-2279
    • Elshahed, M.S.1
  • 26
    • 50949090204 scopus 로고    scopus 로고
    • Novelty and uniqueness patterns of rare members of the soil biosphere
    • Elshahed MS, et al. 2008. Novelty and uniqueness patterns of rare members of the soil biosphere. Appl. Environ. Microbiol. 74:5422-5428
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 5422-5428
    • Elshahed, M.S.1
  • 27
    • 0028334238 scopus 로고
    • Haloferax sp. D1227, a halophilic Archaeon capable of growth on aromatic compounds
    • Emerson D, Chauhan S, Oriel P, Breznak JA. 1994. Haloferax sp. D1227, a halophilic Archaeon capable of growth on aromatic compounds. Arch. Microbiol. 161:445-452
    • (1994) Arch. Microbiol. , vol.161 , pp. 445-452
    • Emerson, D.1    Chauhan, S.2    Oriel, P.3    Breznak, J.A.4
  • 28
    • 4344661889 scopus 로고    scopus 로고
    • Halorubrum tibetense sp. nov., a novel haloalkaliphilic archaeon from Lake Zabuye in Tibet, China
    • Fan H, Yanfen X, Ma Y, Ventosa A, Grant WD. 2004. Halorubrum tibetense sp. nov., a novel haloalkaliphilic archaeon from Lake Zabuye in Tibet, China. Int. J. Syst. Evol. Microbiol. 54:1213-1216
    • (2004) Int. J. Syst. Evol. Microbiol. , vol.54 , pp. 1213-1216
    • Fan, H.1    Yanfen, X.2    Ma, Y.3    Ventosa, A.4    Grant, W.D.5
  • 29
    • 34250833793 scopus 로고    scopus 로고
    • A traditional Japanese-style salt field is a niche for haloarchaeal strains that can survive in 0.5% salt solution
    • Fukushima T, Usami R, Kamekura M. 2007. A traditional Japanese-style salt field is a niche for haloarchaeal strains that can survive in 0.5% salt solution. Saline Syst. 3:2
    • (2007) Saline Syst , vol.3 , pp. 2
    • Fukushima, T.1    Usami, R.2    Kamekura, M.3
  • 30
    • 0000803388 scopus 로고
    • The population frequencies of species and the estimation of population parameters
    • Good IJ. 1953. The population frequencies of species and the estimation of population parameters. Biometrika 40:237-264
    • (1953) Biometrika , vol.40 , pp. 237-264
    • Good, I.J.1
  • 31
    • 40149103278 scopus 로고    scopus 로고
    • Errorcorrecting barcoded primers for pyrosequencing hundreds of samples in multiplex
    • Hamady M, Walker JJ, Harris JK, Gold NJ, Knight R. 2008. Errorcorrecting barcoded primers for pyrosequencing hundreds of samples in multiplex. Nat. Methods 5:235-237
    • (2008) Nat. Methods , vol.5 , pp. 235-237
    • Hamady, M.1    Walker, J.J.2    Harris, J.K.3    Gold, N.J.4    Knight, R.5
  • 32
    • 52449132277 scopus 로고    scopus 로고
    • Halorubrum luteum sp. nov., isolated from Lake Chagannor, Inner Mongolia, China
    • Hu L, et al. 2008. Halorubrum luteum sp. nov., isolated from Lake Chagannor, Inner Mongolia, China. Int. J. Syst. Evol. Microbiol. 58:1705-1708
    • (2008) Int. J. Syst. Evol. Microbiol. , vol.58 , pp. 1705-1708
    • Hu, L.1
  • 33
    • 73849149089 scopus 로고    scopus 로고
    • Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcanii
    • Humbard MA, et al. 2010. Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcanii. Nature 463:54-60
    • (2010) Nature , vol.463 , pp. 54-60
    • Humbard, M.A.1
  • 34
    • 77955251092 scopus 로고    scopus 로고
    • Ironing out the wrinkles in the rare biosphere through improved OTU clustering
    • Huse SM, Welch DM, Morrison HG, Sogin ML. 2010. Ironing out the wrinkles in the rare biosphere through improved OTU clustering. Environ. Microbiol. 12:1889-1898
    • (2010) Environ. Microbiol. , vol.12 , pp. 1889-1898
    • Huse, S.M.1    Welch, D.M.2    Morrison, H.G.3    Sogin, M.L.4
  • 35
    • 78149423326 scopus 로고    scopus 로고
    • Halomarina oriensis gen. nov., sp. nov., a halophilic archaeon isolated from a seawater aquarium
    • Inoue K, Itoh T, Ohkuma M, Kogure K. 2011. Halomarina oriensis gen. nov., sp. nov., a halophilic archaeon isolated from a seawater aquarium. Int. J. Syst. Evol. Microbiol. 61:942-946
    • (2011) Int. J. Syst. Evol. Microbiol. , vol.61 , pp. 942-946
    • Inoue, K.1    Itoh, T.2    Ohkuma, M.3    Kogure, K.4
  • 36
    • 48449090786 scopus 로고    scopus 로고
    • NCBI BLAST: a better web interface
    • Johnson M, et al. 2008. NCBI BLAST: a better web interface. Nucleic Acids Res. 36:W5-W9
    • (2008) Nucleic Acids Res , vol.36
    • Johnson, M.1
  • 37
    • 36448991500 scopus 로고    scopus 로고
    • Clustal W and Clustal X version 2.0
    • Larkin MA, et al. 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23:2947-2948
    • (2007) Bioinformatics , vol.23 , pp. 2947-2948
    • Larkin, M.A.1
  • 38
    • 79953028506 scopus 로고    scopus 로고
    • Pyrosequencing reveals highly diverse and speciesspecific microbial communities in sponges from the Red Sea
    • Lee OO, et al. 2011. Pyrosequencing reveals highly diverse and speciesspecific microbial communities in sponges from the Red Sea. ISME J. 5:650-664
    • (2011) ISME J , vol.5 , pp. 650-664
    • Lee, O.O.1
  • 39
    • 39049148925 scopus 로고    scopus 로고
    • Characterization of natural communities of halophilic microorganisms
    • Litchfield CD, Sikaroodi M, Gillevet PM. 2006. Characterization of natural communities of halophilic microorganisms. Methods Microbiol. 35:513-533
    • (2006) Methods Microbiol , vol.35 , pp. 513-533
    • Litchfield, C.D.1    Sikaroodi, M.2    Gillevet, P.M.3
  • 40
    • 33947140529 scopus 로고    scopus 로고
    • Unifying and distinguishing diversity ordering methods for comparing communities
    • Liu C, Whittaker R, Ma K, Malcolm J. 2007. Unifying and distinguishing diversity ordering methods for comparing communities. Pop. Ecol. 49: 89-100
    • (2007) Pop. Ecol. , vol.49 , pp. 89-100
    • Liu, C.1    Whittaker, R.2    Ma, K.3    Malcolm, J.4
  • 42
    • 33745161855 scopus 로고    scopus 로고
    • Microbial diversity in Maras salterns, a hypersaline environment in the Peruvian Andes
    • Maturrano L, Santos F, Rosselló-Mora R, Antón J. 2006. Microbial diversity in Maras salterns, a hypersaline environment in the Peruvian Andes. Appl. Environ. Microbiol. 72:3887-3895
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 3887-3895
    • Maturrano, L.1    Santos, F.2    Rosselló-Mora, R.3    Antón, J.4
  • 43
    • 0030831861 scopus 로고    scopus 로고
    • Phylogenetic diversity of Archaea in sediment samples from a coastal salt marsh
    • Munson MA, Nedwell DB, Embley TM. 1997. Phylogenetic diversity of Archaea in sediment samples from a coastal salt marsh. Appl. Environ. Microbiol. 63:4729-4733
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 4729-4733
    • Munson, M.A.1    Nedwell, D.B.2    Embley, T.M.3
  • 44
    • 0036688885 scopus 로고    scopus 로고
    • Diversity of archaea in hypersaline environments characterized by molecular-phylogenetic and cultivation studies
    • Ochsenreiter T, Pfeifer F, Schleper C. 2002. Diversity of archaea in hypersaline environments characterized by molecular-phylogenetic and cultivation studies. Extremophiles 6:267-274
    • (2002) Extremophiles , vol.6 , pp. 267-274
    • Ochsenreiter, T.1    Pfeifer, F.2    Schleper, C.3
  • 45
    • 77951769203 scopus 로고    scopus 로고
    • Diversity of Haloquadratum and other haloarchaea in three, geographically distant. Australian saltern crystallizer ponds
    • Oh D, Porter K, Russ B, Burns D, Dyall-Smith M. 2010. Diversity of Haloquadratum and other haloarchaea in three, geographically distant, Australian saltern crystallizer ponds. Extremophiles 141:161-169
    • (2010) Extremophiles , vol.141 , pp. 161-169
    • Oh, D.1    Porter, K.2    Russ, B.3    Burns, D.4    Dyall-Smith, M.5
  • 46
    • 77958084797 scopus 로고    scopus 로고
    • The dying Dead Sea: the microbiology of an increasingly extreme environment
    • Oren A. 2010. The dying Dead Sea: the microbiology of an increasingly extreme environment. Lakes Reservoirs Res. Manage. 15:215-222
    • (2010) Lakes Reservoirs Res. Manage. , vol.15 , pp. 215-222
    • Oren, A.1
  • 47
    • 84857073398 scopus 로고    scopus 로고
    • Ecology of halophiles
    • Horikoshi K, Antranikian G, Bull AT, Robb FT, Stetter KO (ed), v1st ed, Springer, New York, NY
    • Oren A. 2011. Ecology of halophiles, p 343-362. In Horikoshi K, Antranikian G, Bull AT, Robb FT, Stetter KO (ed), Extremophiles handbook, 1st ed. Springer, New York, NY
    • (2011) Extremophiles handbook , pp. 343-362
    • Oren, A.1
  • 48
    • 34547531511 scopus 로고    scopus 로고
    • The order Halobacteriales
    • Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, and Stackebrandt E (ed), Springer, New York, NY
    • Oren A. 2006. The order Halobacteriales, p 113-164. In Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, and Stackebrandt E (ed), The prokaryotes. A handbook on the biology of bacteria: ecophysiology and biochemistry, vol 3. Springer, New York, NY
    • (2006) The prokaryotes. A handbook on the biology of bacteria: ecophysiology and biochemistry , vol.3 , pp. 113-164
    • Oren, A.1
  • 49
    • 70349183968 scopus 로고    scopus 로고
    • Saltern evaporation ponds as model systems for the study of primary production processes under hypersaline conditions
    • Oren A. 2009. Saltern evaporation ponds as model systems for the study of primary production processes under hypersaline conditions. Aquat. Microb. Ecol. 56:193-204.
    • (2009) Aquat. Microb. Ecol. , vol.56 , pp. 193-204
    • Oren, A.1
  • 50
    • 0028312084 scopus 로고
    • On the red coloration of saltern crystallizer ponds. II. Additional evidence for the contribution of halobacterial pigments
    • Oren A, Dubinsky Z. 1994. On the red coloration of saltern crystallizer ponds. II. Additional evidence for the contribution of halobacterial pigments. Int. J. Salt Lake Res. 3:9-13
    • (1994) Int. J. Salt Lake Res. , vol.3 , pp. 9-13
    • Oren, A.1    Dubinsky, Z.2
  • 51
    • 77956282316 scopus 로고    scopus 로고
    • Halophilic archaea in the human intestinal mucosa
    • Oxley APA, et al. 2010. Halophilic archaea in the human intestinal mucosa. Environ. Microbiol. 12:2398-2410.
    • (2010) Environ. Microbiol. , vol.12 , pp. 2398-2410
    • Oxley, A.P.A.1
  • 52
    • 45849154165 scopus 로고    scopus 로고
    • jModelTest: phylogenetic model averaging
    • Posada D. 2008. jModelTest: phylogenetic model averaging. Mol. Biol. Evol. 25:1253-1256.
    • (2008) Mol. Biol. Evol. , vol.25 , pp. 1253-1256
    • Posada, D.1
  • 53
    • 2642518198 scopus 로고    scopus 로고
    • Isolation of haloarchaea that grow at low salinities
    • Purdy KJ, et al. 2004. Isolation of haloarchaea that grow at low salinities. Environ. Microbiol. 6:591-595.
    • (2004) Environ. Microbiol. , vol.6 , pp. 591-595
    • Purdy, K.J.1
  • 54
    • 0035431186 scopus 로고    scopus 로고
    • Novel haloarchaeal 16S rRNA gene sequences from Alpine Permo-Triassic rock salt
    • Radax C, Gruber C, Stan-Lotter H. 2001. Novel haloarchaeal 16S rRNA gene sequences from Alpine Permo-Triassic rock salt. Extremophiles 5:221-228.
    • (2001) Extremophiles , vol.5 , pp. 221-228
    • Radax, C.1    Gruber, C.2    Stan-Lotter, H.3
  • 56
    • 79961135005 scopus 로고    scopus 로고
    • R. Developmental Core Team. R Foundation for Statistical Computing, Vienna, Austria
    • R Developmental Core Team. 2011. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria
    • (2011) R: a language and environment for statistical computing
  • 57
    • 73449146256 scopus 로고    scopus 로고
    • Investigation of archaeal and bacterial diversity in fermented seafood using barcoded pyrosequencing
    • Roh SW, et al. 2010. Investigation of archaeal and bacterial diversity in fermented seafood using barcoded pyrosequencing. ISME J. 4:1-16
    • (2010) ISME J , vol.4 , pp. 1-16
    • Roh, S.W.1
  • 58
    • 33846504423 scopus 로고    scopus 로고
    • Haladaptatus paucihalophilus gen. nov., sp. nov., a halophilic archaeon isolated from a low-salt, high-sulfide spring
    • Savage KN, Krumholz LR, Oren A, Elshahed MS. 2007. Haladaptatus paucihalophilus gen. nov., sp. nov., a halophilic archaeon isolated from a low-salt, high-sulfide spring. Int. J. Syst. Evol. Microbiol. 57:19-24
    • (2007) Int. J. Syst. Evol. Microbiol. , vol.57 , pp. 19-24
    • Savage, K.N.1    Krumholz, L.R.2    Oren, A.3    Elshahed, M.S.4
  • 59
    • 42949116206 scopus 로고    scopus 로고
    • Halosarcina pallida gen. nov., sp. nov., a halophilic archaeon isolated from Zodletone Spring in southwestern Oklahoma
    • Savage KN, Krumholz LR, Oren A, Elshahed MS. 2008. Halosarcina pallida gen. nov., sp. nov., a halophilic archaeon isolated from Zodletone Spring in southwestern Oklahoma. Int. J. Syst. Evol. Microbiol. 58:856-860
    • (2008) Int. J. Syst. Evol. Microbiol. , vol.58 , pp. 856-860
    • Savage, K.N.1    Krumholz, L.R.2    Oren, A.3    Elshahed, M.S.4
  • 60
    • 72949107142 scopus 로고    scopus 로고
    • Introducing Mothur: open-source, platformindependent community-supported software for describing and comparing microbial communities
    • Schloss PD, et al. 2009. Introducing Mothur: open-source, platformindependent, community-supported software for describing and comparing microbial communities. Appl. Environ. microbiol. 75:7537-7541
    • (2009) Appl. Environ. microbiol. , vol.75 , pp. 7537-7541
    • Schloss, P.D.1
  • 62
    • 0002969802 scopus 로고
    • A method of establishing groups of equal amplitude in plant sociology based on similarity of species and its application to analy-ses of the vegetation on Danish commons
    • Sørensen T. 1948. A method of establishing groups of equal amplitude in plant sociology based on similarity of species and its application to analy-ses of the vegetation on Danish commons. Biologiske Skrifter Kongelige Danske Videnskabernes Selskab. 5:1-34
    • (1948) Biologiske Skrifter Kongelige Danske Videnskabernes Selskab , vol.5 , pp. 1-34
    • Sørensen, T.1
  • 63
    • 0033967561 scopus 로고    scopus 로고
    • Halorhabdus utahensis gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea from Great Salt Lake, Utah
    • Wainø M, Tindall BJ, Ingvorsen K. 2000. Halorhabdus utahensis gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea from Great Salt Lake, Utah. Int. J. Syst. Evol. Microbiol. 50:183-190
    • (2000) Int. J. Syst. Evol. Microbiol. , vol.50 , pp. 183-190
    • Wainø, M.1    Tindall, B.J.2    Ingvorsen, K.3
  • 64
    • 34548293679 scopus 로고    scopus 로고
    • Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
    • Wang Q, Garrity GM, Tiedje JM, Cole JR. 2007. Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 73:5261-5267
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 5261-5267
    • Wang, Q.1    Garrity, G.M.2    Tiedje, J.M.3    Cole, J.R.4
  • 66
    • 77957881743 scopus 로고    scopus 로고
    • Fine-scale bacterial beta diversity within a complex ecosystem (Zodletone Spring, OK U.S.A.): the role of the rare biosphere
    • Youssef NH, Couger MB, Elshahed MS. 2010. Fine-scale bacterial beta diversity within a complex ecosystem (Zodletone Spring, OK, U. S. A.): the role of the rare biosphere PLoS One 5:e12414
    • (2010) PLoS One , vol.5
    • Youssef, N.H.1    Couger, M.B.2    Elshahed, M.S.3
  • 67
    • 60749084669 scopus 로고    scopus 로고
    • Diversity rankings among bacterial lineages in soil
    • Youssef NH, Elshahed MS. 2009. Diversity rankings among bacterial lineages in soil. ISME J. 3:305-313.
    • (2009) ISME J , vol.3 , pp. 305-313
    • Youssef, N.H.1    Elshahed, M.S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.