Classification of avian haemolytic Actinobacillus-like organisms (Bisgaard taxon 26) associated with anseriforme birds as Actinobacillus anseriformium sp. nov

International Journal of Systematic and Evolutionary Microbiology

Volumn 62, Issue 2, 2012, Pages 352-358

  Bisgaard, M ^a   Christensen, H ^a  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

ACID; DEXTRIN; FRUCTOSE; INDOLE; MALTOSE; PHOSPHATASE; PORPHYRIN; RNA 16S; SUCROSE; UREASE;

ACTINOBACILLUS; ACTINOBACILLUS ANSERIFORMIUM; ACTINOBACILLUS CAPSULATUS; ACTINOBACILLUS EQUULI; ACTINOBACILLUS LIGNIERESII; ANSERIFORME BIRD; ARTICLE; BACTERIAL GENE; BACTERIAL GROWTH; BIRD; CONJUNCTIVITIS; GENE SEQUENCE; GENOTYPE; HEMOLYSIS; IN VITRO STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; PASTEURELLACEAE; PRIORITY JOURNAL; SEPTICEMIA; SINUSITIS; UPPER RESPIRATORY TRACT;

ACTINOBACILLUS; ACTINOBACILLUS INFECTIONS; ANIMALS; ANSERIFORMES; BACTERIAL PROTEINS; BIRD DISEASES; CATTLE; DNA RESTRICTION ENZYMES; DNA, BACTERIAL; DNA-DIRECTED RNA POLYMERASES; GENOTYPE; HEMOLYSIS; MOLECULAR SEQUENCE DATA; PASTEURELLACEAE; PHYLOGENY; RESPIRATORY TRACT INFECTIONS; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

ACTINOBACILLUS; ACTINOBACILLUS CAPSULATUS; ACTINOBACILLUS EQUULI SUBSP. EQUULI; ACTINOBACILLUS EQUULI SUBSP. HAEMOLYTICUS; ACTINOBACILLUS GENOMOSP. 2; ACTINOBACILLUS LIGNIERESII; ACTINOBACILLUS UREAE; ANAS PLATYRHYNCHOS; AVES; BISGAARD TAXON 26; BOVINAE; PASTEURELLACEAE;

EID: 84856797246     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.028746-0     Document Type: Article

References (41)

1. Altschul, S. F., Madden, T. L., Schä ffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
2. Angen, O., Ahrens, P., Kuhnert, P., Christensen, H. & Mutters, R. (2003). Proposal of Histophilus somni gen. nov., sp. nov. for the three species incertae sedis 'Haemophilus somnus', 'Haemophilus agni' and 'Histophilus ovis'. Int J Syst Evol Microbiol 53, 1449-1456.
3. Benson, D. A., Karsch-Mizrachi, I., Lipman, D. J., Ostell, J. & Sayers, E. W. (2010). GenBank. Nucleic Acids Res 38 (Database issue), D46-D51.
4. Bisgaard, M. (1982). Isolation and characterization of some previously unreported taxa from poultry with phenotypical characters related to Actinobacillus- and Pasteurella species. Acta Pathol Microbiol Immunol Scand [B] 90, 59-67.
5. Bisgaard, M. (1993). Ecology and significance of Pasteurellaceae in animals. Zentralbl Bakteriol 279, 7-26.
6. Bisgaard, M., Houghton, S. B., Mutters, R. & Stenzel, A. (1991). Reclassification of German, British and Dutch isolates of so-called Pasteurella multocida obtained from pneumonic calf lungs. Vet Microbiol 26, 115-124.
7. Bisgaard, M., Korczak, B. M., Busse, H.-J., Kuhnert, P., Bojesen, A. M. & Christensen, H. (2009). Classification of the taxon 2 and taxon 3 complex of Bisgaard within Gallibacterium and description of Gallibacterium melopsittaci sp. nov., Gallibacterium trehalosifermen-tans sp. nov. and Gallibacterium salpingitidis sp. nov. Int J Syst Evol Microbiol 59, 735-744.
8. Brumpt, E. (1910). Pre ́cis de Parasitologie. Paris: Masson et Cie.
9. Busse, H.-J., Bunka, S., Hensel, A. & Lubitz, W. (1997). Discrimination of members of the family Pasteurellaceae based on polyamine patterns. Int J Syst Bacteriol 47, 698-708.
10. Christensen, H. & Bisgaard, M. (2004). Revised definition of Actinobacillus sensu stricto isolated from animals. A review with special emphasis on diagnosis. Vet Microbiol 99, 13-30.
11. Christensen, H. & Bisgaard, M. (2008). Taxonomy and biodiversity of members of Pasteurellaceae. In Pasteurellaceae: Biology, Genomics and Molecular Aspects, pp. 1-26. Edited by P. Kuhnert & H. Christensen. Norfolk: Caister Academic Press.
12. Christensen, H. & Bisgaard, M. (2010). Molecular classification and its impact on diagnostics and understanding the phylogeny and epidemiology of selected members of Pasteurellaceae of veterinary importance. Berl Munch Tierarztl Wochenschr 123, 20-30.
13. Christensen, H., Bisgaard, M., Angen, Ø. & Olsen, J. E. (2002). Final classification of Bisgaard taxon 9 as Actinobacillus arthritidis sp. nov. and recognition of a novel genomospecies for equine strains of Actinobacillus lignieresii. Int J Syst Evol Microbiol 52, 1239-1246.
14. Christensen, H., Foster, G., Christensen, J. P., Pennycott, T., Olsen, J. E. & Bisgaard, M. (2003). Phylogenetic analysis by 16S rDNA gene sequence comparison of avian taxa of Bisgaard and characterization and description of two new taxa of Pasteurellaceae. J Appl Microbiol 95, 354-363.
15. Christensen, H., Kuhnert, P., Busse, H.-J., Frederiksen, W. C. & Bisgaard, M. (2007). Proposed minimal standards for the description of genera, species and subspecies of the Pasteurellaceae. Int J Syst Evol Microbiol 57, 166-178.
16. Christensen, H., Blackall, P. J. & Bisgaard, M. (2009). Phylogenetic relationships of unclassified, satellitic Pasteurellaceae obtained from different species of birds as demonstrated by 16S rRNA gene sequence comparison. Res Microbiol 160, 315-321.
17. Christensen, H., Bojesen, A. M. & Bisgaard, M. (2011). Mannheimia caviae sp. nov., isolated from epidemic conjunctivitis and otitis media in guinea pigs. Int J Syst Evol Microbiol 61, 1699-1704.
18. De Ley, J., Mannheim, W., Mutters, R., Piechulla, K., Tytgat, R., Segers, P., Bisgaard, M., Frederiksen, W., Hinz, K.-H. & Vanhoucke, M. (1990). Inter- and intrafamilial similarities of rRNA cistrons of the Pasteurellaceae. Int J Syst Bacteriol 40, 126-137.
19. Dousse, F., Thomann, A., Brodard, I., Korczak, B. M., Schlatter, Y., Kuhnert, P., Miserez, R. & Frey, J. (2008). Routine phenotypic identification of bacterial species of the family Pasteurellaceae isolated from animals. J Vet Diagn Invest 20, 716-724.
20. Eerola, E. & Lehtonen, O. P. (1988). Optimal data processing procedure for automatic bacterial identification by gas-liquid chro-matography of cellular fatty acids. J Clin Microbiol 26, 1745-1753.
21. Felsenstein, J. (1995). PHYLIP (phylogeny inference package) version 3.57c. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
22. Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
23. Korczak, B., Christensen, H., Emler, S., Frey, J. & Kuhnert, P. (2004). Phylogeny of the family Pasteurellaceae based on rpoB sequences. Int J Syst Evol Microbiol 54, 1393-1399.
24. Kuhnert, P. & Korczak, B. M. (2006). Prediction of whole-genome DNA-DNA similarity, determinationof G+C content and phylogenetic analysis within the family Pasteurellaceae by multilocus sequence analysis (MLSA). Microbiology 152, 2537-2548.
25. AL. Int J Syst Evol Microbiol 57, 625-632.
26. Maddux, R. L., Chengappa, M. M. & McLaughlin, B. G. (1987). Isolation of Actinobacillus suis from a Canada goose (Branta canadensis). J Wildl Dis 23, 483-484.
27. Mollet, C., Drancourt, M. & Raoult, D. (1997). RpoB sequence analysis as a novel basis for bacterial identification. Mol Microbiol 26, 1005-1011.
28. Mutters, R., Mannheim, W. & Bisgaard, M. (1989). Taxonomy of the Group. In Pasteurella and Pasteurellosis, pp. 3-34. Edited by C. Adlam & J. M. Rutter. London: Academic Press.
29. Nørskov-Lauritsen, N. & Kilian, M. (2006). Reclassification of Actinobacillus actinomycetemcomitans, Haemophilus aphrophilus, Haemophilus paraphrophilus and Haemophilus segnis as Aggregatibacter actinomycetemcomitans gen. nov., comb. nov., Aggregatibacter aphro-philus comb. nov. and Aggregatibacter segnis comb. nov., and emended description of Aggregatibacter aphrophilus to include V factor-dependent and V factor-independent isolates. Int J Syst Evol Microbiol 56, 2135-2146.
30. Nørskov-Lauritsen, N., Christensen, H., Okkels, H., Kilian, M. & Bruun, B. (2004). Delineation of the genus Actinobacillus by comparison of partial infB sequences. Int J Syst Evol Microbiol 54, 635-644.
31. AL. In Bergey's Manual of Systematic Bacteriology, 2nd edn, pp. 866-883. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
32. Olsen, G. J., Matsuda, H., Hagstrom, R. & Overbeek, R. (1994). FastDNAmL: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood. Comput Appl Biosci 10, 41-48.
33. Olsen, I., Dewhirst, F. E., Paster, B. J. & Busse, H.-J. (2005). Family Pasteurellaceae. In Bergey's Manual of Systematic Bacteriology, 2nd edn, pp. 851-862. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
34. Piechulla, K., Bisgaard, M., Gerlach, H. & Mannheim, W. (1985). Taxonomy of some recently described avian Pasteurella/Actinobacillus-like organisms as indicated by deoxyribonucleic acid relatedness. Avian Pathol 14, 281-311.
35. Rice, P., Longden, I. & Bleasby, A. (2000). EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 16, 276-277.
36. Sasser, M. (2001). Identification of bacteria by gas chromatography of cellular fatty acids, MIDI Technical Note 101. Newark, DE: MIDI Inc.
37. Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
38. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
39. Tindall, B. J., Rosselló-Móra, R., Busse, H.-J., Ludwig, W. & Kämpfer, P. (2010). Notes on the characterization of prokaryote strains for taxonomic purposes. Int J Syst Evol Microbiol 60, 249-266.
40. Viallard, V., Poirier, I., Cournoyer, B., Haurat, J., Wiebkin, S., Ophel-Keller, K. & Balandreau, J. (1998). Burkholderia graminis sp. nov., a rhizospheric Burkholderia species, and reassessment of [Pseudomonas] phenazinium, [Pseudomonas] pyrrocinia and [Pseudomonas] glathei as Burkholderia. Int J Syst Bacteriol 48, 549-563.
41. Zeigler, D. R. (2003). Gene sequences useful for predicting relatedness of whole genomes in bacteria. Int J Syst Evol Microbiol 53, 1893-1900.