-
1
-
-
0030052649
-
Cutting a Gordian knot: emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom. nov. (basonym, Cytophaga aquatilis Strohl and Tait 1978)
-
Bernardet J.F., Segers P., Vancanneyt M., Berthe F., Kersters K., Vandamme P. Cutting a Gordian knot: emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom. nov. (basonym, Cytophaga aquatilis Strohl and Tait 1978). Int. J. Syst. Bacteriol. 1996, 46:128-148.
-
(1996)
Int. J. Syst. Bacteriol.
, vol.46
, pp. 128-148
-
-
Bernardet, J.F.1
Segers, P.2
Vancanneyt, M.3
Berthe, F.4
Kersters, K.5
Vandamme, P.6
-
2
-
-
0035989637
-
Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family
-
Bernardet J.F., Nakagawa Y., Holmes B. Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int. J. Syst. Evol. Microbiol. 2002, 52:1049-1070.
-
(2002)
Int. J. Syst. Evol. Microbiol.
, vol.52
, pp. 1049-1070
-
-
Bernardet, J.F.1
Nakagawa, Y.2
Holmes, B.3
-
3
-
-
36549086376
-
An introduction to the family Flavobacteriaceae
-
Springer-Verlag, New York
-
Bernardet J.F., Nakagawa Y. An introduction to the family Flavobacteriaceae. The Prokaryotes, A Handbook on the Biology of Bacteria 2006, vol. 7:455-480. Springer-Verlag, New York. 3rd ed.
-
(2006)
The Prokaryotes, A Handbook on the Biology of Bacteria
, vol.7
, pp. 455-480
-
-
Bernardet, J.F.1
Nakagawa, Y.2
-
4
-
-
36549051503
-
The genus Flavobacterium
-
Springer-Verlag, New York
-
Bernardet J.F., Bowman J.P. The genus Flavobacterium. The Prokaryotes, A Handbook on the Biology of Bacteria 2006, vol. 7:481-531. Springer-Verlag, New York. 3rd ed.
-
(2006)
The Prokaryotes, A Handbook on the Biology of Bacteria
, vol.7
, pp. 481-531
-
-
Bernardet, J.F.1
Bowman, J.P.2
-
5
-
-
0029843802
-
Novel Psychrobacter species from Antarctic ornithogenic soils
-
Bowman J.P., Cavanagh J., Austin J.J., Sanderson K. Novel Psychrobacter species from Antarctic ornithogenic soils. Int. J. Syst. Bacteriol. 1996, 46:841-848.
-
(1996)
Int. J. Syst. Bacteriol.
, vol.46
, pp. 841-848
-
-
Bowman, J.P.1
Cavanagh, J.2
Austin, J.J.3
Sanderson, K.4
-
6
-
-
0033803778
-
Description of Cellulophaga algicola sp. nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov.
-
Bowman J.P. Description of Cellulophaga algicola sp. nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov. Int. J. Syst. Evol. Microbiol. 2000, 50:1861-1868.
-
(2000)
Int. J. Syst. Evol. Microbiol.
, vol.50
, pp. 1861-1868
-
-
Bowman, J.P.1
-
7
-
-
50649114895
-
Genetic diversity of Flavobacterium psychrophilum recovered from commercially raised rainbow trout, Oncorhynchus mykiss (Walbaum), and spawning coho salmon, O. kisutch (Walbaum)
-
Chen Y.C., Davis M.A., Lapatra S.E., Cain K.D., Snekvik K.R., Call D.R. Genetic diversity of Flavobacterium psychrophilum recovered from commercially raised rainbow trout, Oncorhynchus mykiss (Walbaum), and spawning coho salmon, O. kisutch (Walbaum). J. Fish Dis. 2008, 31:765-773.
-
(2008)
J. Fish Dis.
, vol.31
, pp. 765-773
-
-
Chen, Y.C.1
Davis, M.A.2
Lapatra, S.E.3
Cain, K.D.4
Snekvik, K.R.5
Call, D.R.6
-
8
-
-
0035144167
-
Antigenic characterization of the fish pathogen Flavobacterium psychrophilum
-
Crump E.M., Perry M.B., Clouthier S.C., Kay W.W. Antigenic characterization of the fish pathogen Flavobacterium psychrophilum. Appl. Environ. Microbiol. 2001, 67:750-759.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 750-759
-
-
Crump, E.M.1
Perry, M.B.2
Clouthier, S.C.3
Kay, W.W.4
-
9
-
-
5644282567
-
Identification of Flavobacterium columnare by a species-specific polymerase chain reaction and renaming of ATCC43622 strain to Flavobacterium johnsoniae
-
Darwish A.M., Ismaiel A.A., Newton J.C., Tang J. Identification of Flavobacterium columnare by a species-specific polymerase chain reaction and renaming of ATCC43622 strain to Flavobacterium johnsoniae. Mol. Cell. Probes 2004, 18:421-427.
-
(2004)
Mol. Cell. Probes
, vol.18
, pp. 421-427
-
-
Darwish, A.M.1
Ismaiel, A.A.2
Newton, J.C.3
Tang, J.4
-
10
-
-
77953908185
-
Genetic diversity and antimicrobial resistance of Flavobacterium psychrophilum isolated from cultured rainbow trout, Onchorynchus mykiss (Walbaum), in Spain
-
Del Cerro A., Márquez I., Prieto J.M. Genetic diversity and antimicrobial resistance of Flavobacterium psychrophilum isolated from cultured rainbow trout, Onchorynchus mykiss (Walbaum), in Spain. J. Fish Dis. 2010, 33:285-291.
-
(2010)
J. Fish Dis.
, vol.33
, pp. 285-291
-
-
Del Cerro, A.1
Márquez, I.2
Prieto, J.M.3
-
11
-
-
0040460179
-
List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet
-
Last full update October 13, 2011. (List of Prokaryotic Names with Standing in Nomenclature)
-
Euzéby J.P. List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet. Int. J. Syst. Bacteriol. 1997, 47:590-592. Last full update October 13, 2011. http://www.bacterio.net (List of Prokaryotic Names with Standing in Nomenclature).
-
(1997)
Int. J. Syst. Bacteriol.
, vol.47
, pp. 590-592
-
-
Euzéby, J.P.1
-
12
-
-
17444393267
-
Isolation and characterization of strains of Flavobacterium columnare from Brazil
-
Figueiredo H.C.P., Klesius P.H., Arias C.R., Evans J., Shoemaker C.A., Pereira D.J., Peixoto M.T.D. Isolation and characterization of strains of Flavobacterium columnare from Brazil. J. Fish Dis. 2005, 28:199-204.
-
(2005)
J. Fish Dis.
, vol.28
, pp. 199-204
-
-
Figueiredo, H.C.P.1
Klesius, P.H.2
Arias, C.R.3
Evans, J.4
Shoemaker, C.A.5
Pereira, D.J.6
Peixoto, M.T.D.7
-
13
-
-
33846840967
-
Phenotypic and molecular characterisation of fish-borne Flavobacterium johnsoniae-like isolates from aquaculture systems in South Africa
-
Flemming L., Rawlings D., Chenia H. Phenotypic and molecular characterisation of fish-borne Flavobacterium johnsoniae-like isolates from aquaculture systems in South Africa. Res. Microbiol. 2007, 158:18-30.
-
(2007)
Res. Microbiol.
, vol.158
, pp. 18-30
-
-
Flemming, L.1
Rawlings, D.2
Chenia, H.3
-
14
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S., Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 2003, 52:696-704.
-
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
15
-
-
84856636787
-
Flavobacterium chilense sp. nov., and Flavobacterium araucananum sp. nov., two novel species isolated from farmed salmonid in Chile
-
[Epub ahead of print doi:10.1099/ijs.0.033431-0]
-
Kämpfer P., Lodders N., Martin K., Avendaño-Herrera R. Flavobacterium chilense sp. nov., and Flavobacterium araucananum sp. nov., two novel species isolated from farmed salmonid in Chile. Int. J. Syst. Evol. Microbiol. 2011, [Epub ahead of print doi:10.1099/ijs.0.033431-0].
-
(2011)
Int. J. Syst. Evol. Microbiol.
-
-
Kämpfer, P.1
Lodders, N.2
Martin, K.3
Avendaño-Herrera, R.4
-
16
-
-
0035349512
-
Chronic plasma cell osteomyelitis of the humerus associated with Shigella and Flavobacterium
-
Kang L., Millett P.J., Mezera K., Weiland A.J. Chronic plasma cell osteomyelitis of the humerus associated with Shigella and Flavobacterium. J. Shoulder Elbow Surg. 2001, 10:292-294.
-
(2001)
J. Shoulder Elbow Surg.
, vol.10
, pp. 292-294
-
-
Kang, L.1
Millett, P.J.2
Mezera, K.3
Weiland, A.J.4
-
17
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 1980, 16:111-120.
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
18
-
-
3242810318
-
MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar S., Tamura K., Nei M. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform. 2004, 5:150-163.
-
(2004)
Brief Bioinform.
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
19
-
-
0032695947
-
Flavobacterium spp. organisms as opportunistic bacterial pathogens during advanced HIV disease
-
Manfredi R., Nanetti A., Ferri M., Mastroianni A., Coronado O.V., Chiodo F. Flavobacterium spp. organisms as opportunistic bacterial pathogens during advanced HIV disease. J. Infect. 1999, 39:146-152.
-
(1999)
J. Infect.
, vol.39
, pp. 146-152
-
-
Manfredi, R.1
Nanetti, A.2
Ferri, M.3
Mastroianni, A.4
Coronado, O.V.5
Chiodo, F.6
-
20
-
-
85010439719
-
A procedure for the isolation of deoxyribonucleic acid from microoganisms
-
Marmur J. A procedure for the isolation of deoxyribonucleic acid from microoganisms. J. Mol. Biol. 1961, 3:208-219.
-
(1961)
J. Mol. Biol.
, vol.3
, pp. 208-219
-
-
Marmur, J.1
-
21
-
-
73649209034
-
Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature
-
Marmur J., Doty P. Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J. Mol. Biol. 1962, 5:109-118.
-
(1962)
J. Mol. Biol.
, vol.5
, pp. 109-118
-
-
Marmur, J.1
Doty, P.2
-
22
-
-
0030203863
-
TREEVIEW: an application to display phylogenetic trees on personal computers
-
Page R.D.M. TREEVIEW: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 1996, 12:357-358.
-
(1996)
Comput. Appl. Biosci.
, vol.12
, pp. 357-358
-
-
Page, R.D.M.1
-
23
-
-
0028186046
-
Using the FASTA program to search protein and DNA sequence databases
-
Pearson W.R. Using the FASTA program to search protein and DNA sequence databases. Methods Mol. Biol. 1994, 24:307-331.
-
(1994)
Methods Mol. Biol.
, vol.24
, pp. 307-331
-
-
Pearson, W.R.1
-
24
-
-
84856677804
-
-
SEQtools, a software package for analysis of nucleotide and protein sequences.
-
Rasmussen, S.W. (2002) SEQtools, a software package for analysis of nucleotide and protein sequences. http://www.seqtools.dk/.
-
(2002)
-
-
Rasmussen, S.W.1
-
25
-
-
0023375195
-
The neighbour-joining method: a new method for reconstructing phylogenetic trees
-
Saitou N., Nei M. The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 1987, 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
26
-
-
84856677805
-
-
Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids. MIDI, Inc.
-
Sasser, M. (2001) Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids. MIDI, Inc. http://www.microbialid.com/PDF/TechNote_101.pdf.
-
(2001)
-
-
Sasser, M.1
-
27
-
-
0000612080
-
Phenotypic characterization
-
American Society for Microbiology, Washington, DC, P. Gerhardt, R.G.E. Murray, W.A. Wood, N.R. Krieg (Eds.)
-
Smibert R.M., Krieg N.R. Phenotypic characterization. Methods for General and Molecular Bacteriology 1994, 607-653. American Society for Microbiology, Washington, DC. P. Gerhardt, R.G.E. Murray, W.A. Wood, N.R. Krieg (Eds.).
-
(1994)
Methods for General and Molecular Bacteriology
, pp. 607-653
-
-
Smibert, R.M.1
Krieg, N.R.2
-
28
-
-
53149143854
-
Reclassification of Rhodobium marinum and Rhodobium pfennigii as Afifella marina gen. nov. comb. nov. and Afifella pfennigii comb. nov., a new genus of photoheterotrophic Alphaproteobacteria and emended descriptions of Rhodobium, Rhodobium orientis and Rhodobium gokarnense
-
Urdiain M., López-López A., Gonzalo C., Busse H.J., Langer S., Kämpfer P., Rosselló-Móra R. Reclassification of Rhodobium marinum and Rhodobium pfennigii as Afifella marina gen. nov. comb. nov. and Afifella pfennigii comb. nov., a new genus of photoheterotrophic Alphaproteobacteria and emended descriptions of Rhodobium, Rhodobium orientis and Rhodobium gokarnense. Syst. Appl. Microbiol. 2008, 31:339-351.
-
(2008)
Syst. Appl. Microbiol.
, vol.31
, pp. 339-351
-
-
Urdiain, M.1
López-López, A.2
Gonzalo, C.3
Busse, H.J.4
Langer, S.5
Kämpfer, P.6
Rosselló-Móra, R.7
-
29
-
-
16844366424
-
Uruburuella suis gen. nov., sp. nov., isolated from clinical specimens of pigs
-
Vela A.I., Collins M.D., Lawson P.A., García N., Domínguez L., Fernández-Garayzábal J.F. Uruburuella suis gen. nov., sp. nov., isolated from clinical specimens of pigs. Int. J. Syst. Evol. Microbiol. 2005, 55:643-647.
-
(2005)
Int. J. Syst. Evol. Microbiol.
, vol.55
, pp. 643-647
-
-
Vela, A.I.1
Collins, M.D.2
Lawson, P.A.3
García, N.4
Domínguez, L.5
Fernández-Garayzábal, J.F.6
-
30
-
-
0000770675
-
International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
-
Wayne L.G., Brenner D.J., Colwell R.R., Grimont P.A.D., Kandler O., Krichevsky M.I., Moore L.H., Moore W.E.C., Murray R.G.E., Stackebrandt E., Starr M.P., Truper H.G. International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int. J. Syst. Bacteriol. 1987, 37:463-464.
-
(1987)
Int. J. Syst. Bacteriol.
, vol.37
, pp. 463-464
-
-
Wayne, L.G.1
Brenner, D.J.2
Colwell, R.R.3
Grimont, P.A.D.4
Kandler, O.5
Krichevsky, M.I.6
Moore, L.H.7
Moore, W.E.C.8
Murray, R.G.E.9
Stackebrandt, E.10
Starr, M.P.11
Truper, H.G.12
-
31
-
-
0034065777
-
Detection of Flavobacterium psychrophilum from fish tissue and water samples by PCR amplification
-
Wiklund T., Madsen L., Bruun M.S., Dalsgaard I. Detection of Flavobacterium psychrophilum from fish tissue and water samples by PCR amplification. J. Appl. Microbiol. 2000, 88:299-307.
-
(2000)
J. Appl. Microbiol.
, vol.88
, pp. 299-307
-
-
Wiklund, T.1
Madsen, L.2
Bruun, M.S.3
Dalsgaard, I.4
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