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Volumn 28, Issue 3, 2012, Pages 428-429

B-SOLANA: An approach for the analysis of two-base encoding bisulfite sequencing data

Author keywords

[No Author keywords available]

Indexed keywords

HYDROGEN SULFITE; SULFITE;

EID: 84856576667     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btr660     Document Type: Article
Times cited : (19)

References (10)
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    • Bock, C.1
  • 2
    • 77957322330 scopus 로고    scopus 로고
    • Whole methylome analysis by ultra-deep sequencing using two-base encoding
    • Bormann Chung, C.A. et al. (2010) Whole methylome analysis by ultra-deep sequencing using two-base encoding. PLoS One, 5, e9320.
    • (2010) PLoS One , vol.5
    • Bormann Chung, C.A.1
  • 3
    • 79960927422 scopus 로고    scopus 로고
    • Increased methylation variation in epigenetic domains across cancer types
    • Hansen, K. et al. (2011) Increased methylation variation in epigenetic domains across cancer types. Nat. Genet., 43, 768-775.
    • (2011) Nat. Genet. , vol.43 , pp. 768-775
    • Hansen, K.1
  • 4
    • 0016439429 scopus 로고
    • DNA modification mechanisms and gene activity during development
    • Holliday, R. et al. (1975) DNA modification mechanisms and gene activity during development. Science, 187, 226-232.
    • (1975) Science , vol.187 , pp. 226-232
    • Holliday, R.1
  • 5
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead, B. et al. (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol., 10, R25.
    • Genome Biol , vol.10
    • Langmead, B.1
  • 6
    • 70450217879 scopus 로고    scopus 로고
    • Human DNA methylomes at base resolution show widespread epigenomic differences
    • (2009) Nature , vol.462 , pp. 315-322
    • Lister, R.1
  • 7
    • 68549104404 scopus 로고    scopus 로고
    • The Sequence Alignment/Map format and SAMtools
    • Li, H. et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics, 25, 2078-2079.
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1
  • 8
    • 77955048773 scopus 로고    scopus 로고
    • An alignment algorithm for bisulfite sequencing using the Applied Biosystems SOLiD System
    • Ondov, B.D. et al. (2010) An alignment algorithm for bisulfite sequencing using the Applied Biosystems SOLiD System. Bioinformatics, 26, 1901-1902.
    • (2010) Bioinformatics , vol.26 , pp. 1901-1902
    • Ondov, B.D.1
  • 9
    • 80051921569 scopus 로고    scopus 로고
    • MethylCoder: Software Pipeline for Bisulfite-Treated Sequences
    • Pedersen, B. et al. (2011) MethylCoder: Software Pipeline for Bisulfite-Treated Sequences. Bioinformatics, 27, 2435-2436.
    • (2011) Bioinformatics , vol.27 , pp. 2435-2436
    • Pedersen, B.1
  • 10
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    • The DNA methylome
    • Pelizzola, M. et al. (2010) The DNA methylome. FEBS Lett., 585, 1994-2000.
    • (2010) FEBS Lett , vol.585 , pp. 1994-2000
    • Pelizzola, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.