Biocontrol of charcoal-rot of sorghum by actinomycetes isolated from herbal vermicompost

African Journal of Biotechnology

Volumn 10, Issue 79, 2011, Pages 18142-18152

  Gopalakrishnan, Subramaniam ^a   Kiran, Bandru Keerthi ^a   Humayun, Pagidi ^a   Vidya, Meesala ^a   Deepthi, Kanala ^a   Jacob, Simi ^a   Vadlamudi, Srinivas ^a   Alekhya, Gottumukkala ^a   Rupela, Om ^a  

^a INTERNATIONAL CROPS RESEARCH INSTITUTE FOR THE SEMI ARID TROPICS ICRISAT   (India)

Author keywords

Antagonistic actinomycetes; Biocontrol; Charcoal rot; Macrophomina phaseolina

Indexed keywords

CHITINASE; DNA 16S; HYDROGEN CYANIDE; INDOLEACETIC ACID; PROTEINASE; SIDEROPHORE;

ACTINOBACTERIA; ANTIFUNGAL ACTIVITY; ARTICLE; BACTERIAL GROWTH; BACTERIUM ISOLATE; BIOLOGICAL PEST CONTROL; CHARCOAT ROT DISEASE; CONTROLLED STUDY; DRY MASS; GENE SEQUENCE; GREENHOUSE EFFECT; GROWTH INHIBITION; MACROPHOMINA PHASEOLINA; NONHUMAN; PLANT DISEASE; PLANT GROWTH; PLANT ROOT; ROOT LENGTH; SORGHUM; STREPTOMYCES; VERMICOMPOST;

ACTINOBACTERIA (CLASS); MACROPHOMINA PHASEOLINA; STREPTOMYCES;

EID: 84856485991     PISSN: 16845315     EISSN: None     Source Type: Journal    
DOI: 10.5897/AJB11.2710     Document Type: Article

References (43)

1. Adhikari TB, Joseph CM, Yang G, Phillips DA, Nelson LM (2001). Evaluation of bacteria isolated from rice for plant growth promotion and biological control of seedling disease of rice. Can. J. Microbiol. 47: 916-924.
2. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990). Basic local alignment search tool. J. Mol. Biol. 215: 403-410.
3. Asciutto K, Rivera MC, Wright ER, Morisigue D, Lopez MV (2006). Effect of vermicompost on the growth and health of Impatiens wallerana. Int. J. Exp. Bot. 75: 115-123.
4. Bashar MA, Rai B (1994). Antagonistic potential of root region microflora of chickpea against Fusarium oxysporum f. sp. ciceri. Bangl. J. Bot. 23: 13-19.
5. Bazzicalupo M, Fani R (1995). The use of RAPD for generating specific DNA probes for microorganisms. In: Clap JP (ed.). Methods in Molecular Biology, Species Diagnostic Protocols: PCR and other Nucleic Acid Methods. Humana Press Inc, Totowa NJ, pp. 122-124.
6. Bhattacharya A, Chandra S, Barik S (2009). Lipase and protease producing microbes from the environment of sugar beet field. Ind. J. Agric. Biochem. 22: 26-30.
7. Bhattacharya G, Siddiqui KAI, Chakraborty S (1994). The toxicity of phaseolinone to mice. Ind. J. Pharmacol. 26: 121-125.
8. Das IK, Indira S, Annapurna A, Prabhakar S, Seetharama N (2008). Biocontrol of charcoal-rot in sorghum by fluorescent Pseudomonads associated with the rhizosphere. Crop Prot. 27: 1407-1414.
9. Edwards CA (1998). The use of earthworms in processing organic wastes into plant growth media and animal feed protein. In: Earthworm Ecology (ed.) Edwards CA, CRC press: Boca Raton, Florida. pp. 327-354.
10. Getha K, Vikineswary S, Wong WH, Seki T, Ward A, Goodfellow M (2005). Evaluation of Streptomyces spp. strain g10 for suppression of Fusarium wilt and rhizosphere colonization in pot-grown banana plantlets. J. Ind. Microbiol. Biotechnol. 32: 24-32.
11. Gopalakrishnan S, Kannan IGK, Alekhya G, Humayun P, Meesala SV, Kanala D (2010). Efficacy of Jatropha, Annona and Parthenium biowash on Sclerotium rolfsii, Fusarium oxysporum f. sp. ciceri and Macrophomina phaseolina, pathogens of chickpea and sorghum. Afr. J. Biotechnol. 9: 8048-8057.
12. Gupta CP, Dubey RC, Maheswari DK (2002). Plant growth enhancement and suppression of Macrophomina phaseolina causing charcoal-rot of peanut by fluorescent Pseudomonas. Biol. Fertil. Soil. 35: 399-405.
13. Haas K, Keel C, Laville J, Maurhofer M, Oberhansli TF, Schnider U, Voisard C, Wuthrich B, Defago G (1991). Secondary metabolites of Pseudomonas fluorescens strain CHAO involved in the suppression of root diseases. In: Hennecks H, Verma DPS (eds.), Advances in Molecular Genetics of Plant-Microbe Interactions, Interlaken, Switzerland. pp. 450-456.
14. Hirano S, Nagao N (1988). An improved method for the preparation of colloidal chitin by using methanesulfonic acid. Agric. Biol. Chem. 52: 2111-2112.
15. Khamna S, Yokota A, Lumyong S (2009). Actinomycetes isolated from medicinal plant rhizosphere soils: diversity and screening of antifungal compounds, indole-3-acetic acid and siderophore production. World J. Microbiol. Biotechnol. 25: 649-655.
16. Lima LHC, Marco JL, Felix CR (1998). Enzimas hidroliticas envolvidas no controle biologico por miciparasitisma. Controle biologico. Jaguraiuna. In: Melo IS, Azevedo JL (eds.), Controle Biologico. Jaguriuna: EMBRAPA-Meio Ambiente. 11: 263-304.
17. Liu D, Anderson NA, Kinkel LK (1996). Selection and characterization of strains of Streptomyces suppressive to the potato scab pathogen. Can. J. Microbiol. 4: 487-502.
18. Lorck H (1948). Production of hydrocyanic acid by bacteria. Physiol. Plant. 1: 142-146.
19. Lugtenberg BJJ, Dekkers LC (1999). What makes Pseudomonas bacteria rhizosphere competent? Environ. Microbiol. 1: 9-13.
20. Nath G, Singh K (2009). Utilization of vermiwash potential on certain summer vegetable crops. J. Central Eur. Agric. 10: 417-426.
21. Nene YL, Haware MP, Reddy MV (1981). Chickpea diseases: resistance-screening techniques, Infor. Bull. ICRISAT, 10: 5-7.
22. Nonoh JO, Lwande W, Masiga D, Herrmann R, Presnail JK, Schepers E, Okech MA, Bagine R, Mungai P, Nyende AB, Boga HI (2010). Isolation and characterization of Streptomyces spp. with antifungal activity from selected national parks in Kenya. Afr. J. Microbiol. Res. 4: 856-864.
23. Pandey P, Kang SC, Maheswari DK (2005). Isolation of endophytic plant growth-promoting Burkholderia spp. MSSP from root nodules of Mimosa pudica. Curr. Sci. 89: 177-180.
24. Patten CL, Glick BR (1996). Bacterial biosyntehsis of indole-3-acetic acid. Can. J. Microbiol. 42: 207-220.
25. Patten CL, Glick BR (2002). Role of Pseudomonas putida in indole acetic acid in development of host plant root system. Appl. Environ. Microbiol. 68: 3795-3801.
26. Perner H, Schwarz D, George E (2006). Effect of mycorrhizal inoculation and compost supply on growth and nutrient uptake of young leek plants grown on peat-based substrates. Hort. Sci. 4: 628-632.
27. Postma J, Montanari M, Van den Boogert PHJF (2003). Microbial enrichment to enhance disease suppressive activity of compost. Eur. J. Soil Biol. 39: 157-163.
28. Prabha ML (2009). Waste management by vermin-technology. Indian J. Environ. Prot. 29: 795-800.
29. Prapagdee B, Kuekulvong C, Mongkolsuk S (2008). Antifungal potential of extracellular metabolites produced by Streptomyces hygroscopcius against phytopathogenic fungi. Int. J. Biol. Sci. 4: 330-337.
30. Remya M, Vijayakumar R (2008). Isolation and characterization of marine antagonistic ctinomycetes from west coast of India. Facta. Univ. Med. Biol. 15: 13-19.
31. Rothrock CS, Gottlieb D (1984). Role of antibiosis in antagonism of Streptomyces hygroscopicus var. geldanus to Rhizoctonia solani in soil. Can. J. Microbiol. 30: 1440-1447.
32. Ryder MH, Jones DA (1993). Biological control of crown gall. In: Hornby D (ed.), Biological Control of Soil-Borne Plant Pathogens, CAB international, UK. pp. 45-63.
33. Saitou N, Nei M (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
34. Schippers B, Baker AW, Bakker PAHM (1987). Interactions of deleterious and beneficial rhizosphere microorganisms and the effect of cropping practices. Annu. Rev. Phytopathol. 25: 339-358.
35. Schwyn B, Neilands J (1987). Universal chemical assay for the detection and determination of siderophores. Anal. Biochem. 160: 47-56.
36. Singh N, Pandey P, Dubey RC, Maheshwari DK (2008). Biological control of root rot fungus Macrophomina phaseolina and growth enhancement of Pinus roxburghii by rhizosphere competent Bacillus subtilis BN1. World J. Microbiol. Biotechnol. 24: 1669-1679.
37. Suthar S, Choyal R, Singh R, Sudesh (2005). Stimulatory effect of earthworm body fluid on seed germination and seedlings growth of two legumes. J. Phytol. Res. 1: 219-222.
38. Tamura K, Dudley J, Nei M, Kumar S (2007). MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599.
39. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997). The clustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acid. Res. 25: 4876-4882.
40. Tokala RK, Strap JL, Jung CM, Crawford DL, Salove MH, Deobald LA, Bailey JF, Morra J (2002). Novel plant-microbe rhizosphere interaction involving Streptomyces lydicus WYEC108 and the pea plant (Pisum sativum). Appl. Environ. Microbiol. 68: 2161-2171.
41. Wang Y, Brown HN, Crowley DE, Szaniszlo P (1993). Evidence for direct utilization of a siderophore, ferrioxamine B, in axenically grown cucumber. Plant Cell Environ. 16: 579-585.
42. Wei G, Kloepper JW, Sadik T (1991). Induction of systemic resistance of cucumber to Colletotrichum orbiculare by select strains of plant growth-promoting rhizobacteria. Phytopathology, 81: 508-512.
43. Wyllie TD (1998). Charcoal-rot. In: Sinclair JB, Backman PA (eds.) Compendium of Soybean Diseases, 3rd Edn. APS Press, St. Paul, MN. pp. 114-118.