Transcriptional regulation of type I interferon gene expression by interferon regulatory factor-3 in Japanese flounder, Paralichthys olivaceus

Developmental and Comparative Immunology

Volumn 36, Issue 4, 2012, Pages 697-706

  Ohtani, Maki ^a   Hikima, Jun ichi ^a   Hwang, Seong Don ^b   Morita, Takahiro ^b   Suzuki, Yoshiaki ^b   Kato, Goshi ^b   Kondo, Hidehiro ^b   Hirono, Ikuo ^b   Jung, Tae Sung ^a   Aoki, Takashi ^a,b  

^a Gyeongsang National University   (South Korea)

^b TOKYO UNIVERSITY OF MARINE SCIENCE AND TECHNOLOGY   (Japan)

Author keywords

Innate immunity; IRF3; LGP2; MDA5; Type I interferon

Indexed keywords

ACTIVATING TRANSCRIPTION FACTOR 2; BETA ACTIN; DNA; DOUBLE STRANDED RNA; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; INTERFERON; INTERFERON REGULATORY FACTOR 1; INTERFERON REGULATORY FACTOR 3; INTERFERON REGULATORY FACTOR 4; INTERFERON REGULATORY FACTOR 7; LUCIFERASE; POLYINOSINIC POLYCYTIDYLIC ACID; PROTEIN C JUN; STAT PROTEIN; TRANSCRIPTION FACTOR;

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; DNA FLANKING REGION; EMBRYO; EMBRYO CELL; ENZYME ASSAY; FLOUNDER; GENE; GENE EXPRESSION; GENE OVEREXPRESSION; GENETIC TRANSCRIPTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN MOTIF; TRANSCRIPTION REGULATION; TYPE 1 INTERFERON GENE;

ACANTHOPTERYGII; PARALICHTHYS OLIVACEUS;

EID: 84856421078     PISSN: 0145305X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.dci.2011.10.008     Document Type: Article

References (44)

1. Aggad D., Mazel M., Boudinot P., Mogensen K.E., Hamming O.J., Hartmann R., Kotenko S., Herbomel P., Lutfalla G., Levraud J.P. The two groups of zebrafish virus-induced interferons signal via distinct receptors with specific and shared chains. J. Immunol. 2009, 183:3924-3931.
2. Altmann S.M., Mellon M.T., Distel D.L., Kim C.H. Molecular and functional analysis of an interferon gene from the zebrafish, Danio rerio. J. Virol. 2003, 77:1992-2002.
3. Bergan V., Kileng O., Sun B., Robertsen B. Regulation and function of interferon regulatory factors of Atlantic salmon. Mol. Immunol. 2010, 47:2005-2014.
4. Bergan V., Steinsvik S., Xu H., Kileng O., Robertsen B. Promoters of type I interferon genes from Atlantic salmon contain two main regulatory regions. FEBS J. 2006, 273:3893-3906.
5. Bergstroem B., Johnsen I.B., Nguyen T.T., Hagen L., Slupphaug G., Thommesen L., Anthonsen M.W. Identification of a novel in vivo virus-targeted phosphorylation site in interferon regulatory factor-3 (IRF3). J. Biol. Chem. 2010, 285:24904-24914.
6. Biacchesi S., LeBerre M., Lamoureux A., Louise Y., Lauret E., Boudinot P., Bremont M. Mitochondrial antiviral signaling protein plays a major role in induction of the fish innate immune response against RNA and DNA viruses. J. Virol. 2009, 83:7815-7827.
7. Casani D., Randelli E., Costantini S., Facchiano A.M., Zou J., Martin S., Secombes C.J., Scapigliati G., Buonocore F. Molecular characterisation and structural analysis of an interferon homologue in sea bass (Dicentrarchus labrax L.). Mol. Immunol. 2009, 46:943-952.
8. Chang M., Collet B., Nie P., Lester K., Campbell S., Secombes C.J., Zou J. Expression and functional characterization of the RIG-I-like receptors MDA5 and LGP2 in rainbow trout (Oncorhynchus mykiss). J. Virol. 2011, 85:8403-8412.
9. Chang M., Nie P., Collet B., Secombes C.J., Zou J. Identification of an additional two-cysteine containing type I interferon in rainbow trout Oncorhynchus mykiss provides evidence of a major gene duplication event within this gene family in teleosts. Immunogenetics 2009, 61:315-325.
10. Cui H., Yan Y., Wei J., Huang X., Huang Y., Ouyang Z., Qin Q. Identification and functional characterization of an interferon regulatory factor 7-like (IRF7-like) gene from orange-spotted grouper, Epinephelus coioides. Dev. Comp. Immunol. 2011, 35:672-684.
11. Falvo J.V., Parekh B.S., Lin C.H., Fraenkel E., Maniatis T. Assembly of a functional beta interferon enhanceosome is dependent on ATF-2-c-jun heterodimer orientation. Mol. Cell Biol. 2000, 20:4814-4825.
12. Hikima J., Minagawa S., Hirono I., Aoki T. Molecular cloning, expression and evolution of the Japanese flounder goose-type lysozyme gene, and the lytic activity of its recombinant protein. Biochim. Biophys. Acta. 2001, 1520:35-44.
13. Holland J.W., Bird S., Williamson B., Woudstra C., Mustafa A., Wang T., Zou J., Blaney S.C., Collet B., Secombes C.J. Molecular characterization of IRF3 and IRF7 in rainbow trout, Oncorhynchus mykiss: functional analysis and transcriptional modulation. Mol. Immunol. 2008, 46:269-285.
14. Honda K., Takaoka A., Taniguchi T. Type I interferon gene induction by the interferon regulatory factor family of transcription factors. Immunity 2006, 25:349-360.
15. Hu G., Yin X., Lou H., Xia J., Dong X., Zhang J., Liu Q. Interferon regulatory factor 3 (IRF-3) in Japanese flounder, Paralichthys olivaceus: sequencing, limited tissue distribution, inducible expression and induction of fish type I interferon promoter. Dev. Comp. Immunol. 2011, 35:164-173.
16. Hu G., Yin X., Xia J., Dong X., Zhang J., Liu Q. Molecular cloning and characterization of interferon regulatory factor 7 (IRF-7) in Japanese flounder, Paralichthys olivaceus. Fish Shellfish Immunol. 2010, 29:963-971.
17. Katagiri T., Asakawa S., Hirono I., Aoki T., Shimizu N. Genomic bacterial artificial chromosome library of the Japanese flounder Paralichthys olivaceus. Mar. Biotechnol. (NY) 2000, 2:571-576.
18. Kasai, H., Yoshimizu, M., 2001. Establishment of Japanese flounder embryo cell lines. B. Fisheries Sci. Hokkaido Univ. 52, 67-70.
19. Kawai T., Akira S. The role of pattern-recognition receptors in innate immunity: update on Toll-like receptors. Nat. Immunol. 2010, 11:373-384.
20. Kawai T., Akira S. Toll-like receptors and their crosstalk with other innate receptors in infection and immunity. Immunity 2011, 34:637-650.
21. Kileng O., Albuquerque A., Robertsen B. Induction of interferon system genes in Atlantic salmon by the imidazoquinoline S-27609, a ligand for Toll-like receptor 7. Fish Shellfish Immunol. 2008, 24:514-522.
22. Kitao Y., Kono T., Korenaga H., Lizasa T., Nakamura K., Savan R., Sakai M. Characterization and expression analysis of type I interferon in common carp Cyprinus carpio L. Mol. Immunol. 2009, 46:2548-2556.
23. Kontsek P., Karayianni-Vasconcelos G., Kontsekova E. The human interferon system: characterization and classification after discovery of novel members. Acta. Virol. 2003, 47:201-215.
24. Kotenko S.V., Gallagher G., Baurin V.V., Lewis-Antes A., Shen M., Shah N.K., Langer J.A., Sheikh F., Dickensheets H., Donnelly R.P. IFN-λs mediate antiviral protection through a distinct class II cytokine receptor complex. Nat. Immunol. 2003, 4:69-77.
25. Kumar S., Nei M., Dudley J., Tamura K. MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinform. 2008, 9:299-306.
26. Levy D.E., Garcia-Sastre A. The virus battles: IFN induction of the antiviral state and mechanisms of viral evasion. Cytokine Growth Factor Rev. 2001, 12:143-156.
27. -ΔΔCt methods. Methods 2001, 25:402-408.
28. Long S., Wilson M., Bengten E., Bryan L., Clem L.W., Miller N.W., Chinchar V.G. Identification of a cDNA encoding channel catfish interferon. Dev. Comp. Immunol. 2004, 28:97-111.
29. Lutfalla G., Roest Crollius H., Stange-Thomann N., Jaillon O., Mogensen K., Monneron D. Comparative genomic analysis reveals independent expansion of a lineage-specific gene family in vertebrates: the class II cytokine receptors and their ligands in mammals and fish. BMC Genomics 2003, 4:29.
30. Ohtani M., Hikima J., Kondo H., Hirono I., Jung T.S., Aoki T. Characterization and antiviral function of a cytosolic sensor gene, MDA5, in Japanese flounder, Paralichthys olivaceus. Dev. Comp. Immunol. 2011, 35:554-562.
31. Ohtani M., Hikima J., Kondo H., Hirono I., Jung T.S., Aoki T. Evolutional conservation of molecular structure and antiviral function of a viral RNA receptor, LGP2, in Japanese flounder, Paralichthys olivaceus. J. Immunol. 2010, 185:7507-7517.
32. Pestka S., Krause C.D., Sarkar D., Walter M.R., Shi Y., Fisher P.B. Interleukin-10 and related cytokines and receptors. Annu. Rev. Immunol. 2004, 22:929-979.
33. Purcell M.K., Laing K.J., Woodson J.C., Thorgaard G.H., Hansen J.D. Characterization of the interferon genes in homozygous rainbow trout reveals two novel genes, alternate splicing and differential regulation of duplicated genes. Fish Shellfish Immunol. 2009, 26:293-304.
34. Samuel C.E. Antiviral actions of interferons. Clin. Microbiol. Rev. 2001, 14:778-809.
35. Strandskog G., Skjaeveland I., Ellingsen T., Jorgensen J.B. Double-stranded RNA- and CpG DNA-induced immune responses in Atlantic salmon: comparison and synergies. Vaccine 2008, 26:4704-4715.
36. Sun B., Robertsen B., Wang Z., Liu B. Identification of an Atlantic salmon IFN multigene cluster encoding three IFN subtypes with very different expression properties. Dev. Comp. Immunol. 2009, 33:547-558.
37. Sun F., Zhang Y.B., Liu T.K., Gan L., Yu F.F., Liu Y., Gui J.F. Characterization of fish IRF3 as an IFN-inducible protein reveals evolving regulation of IFN response in vertebrates. J. Immunol. 2010, 185:7573-7582.
38. Sun F., Zhang Y.B., Liu T.K., Shi J., Wang B., Gui J.F. Fish MITA serves as a mediator for distinct fish IFN gene activation dependent on IRF3 or IRF7. J. Immunol. 2011, 187:2531-2539.
39. Trinchieri G. Type I interferon: friend or foe?. J. Exp. Med. 2010, 207:2053-2063.
40. Wang R.P., Zhang M., Li Y., Diao F.C., Chen D., Zhai Z., Shu H.B. Differential regulation of IKKα-mediated activation of IRF3/7 by NIK. Mol. Immunol. 2008, 45:1926-1934.
41. Yabu T., Hirose H., Hirono I., Katagiri T., Aoki T., Yamamoto E. Molecular cloning of a novel interferon regulatory factor in Japanese flounder, Paralichthys olivaceus. Mol. Mar. Biol. Biotechnol. 1998, 7:138-144.
42. Yoneyama M., Suhara W., Fukuhara Y., Fukuda M., Nishida E., Fujita T. Direct triggering of the type I interferon system by virus infection: activation of a transcription factor complex containing IRF-3 and CBP/p300. EMBO J. 1998, 17:1087-1095.
43. Zou J., Secombes C.J. Teleost fish interferons and their role in immunity. Dev. Comp. Immunol. 2011, 35:253-264.
44. Zou J., Tafalla C., Truckle J., Secombes C.J. Identification of a second group of type I IFNs in fish sheds light on IFN evolution in vertebrates. J. Immunol. 2007, 179:3859-3871.