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Volumn 97, Issue 2, 2012, Pages

Genome-wide sperm deoxyribonucleic acid methylation is altered in some men with abnormal chromatin packaging or poor in vitro fertilization embryogenesis

Author keywords

DNA methylation; epigenetic; genome wide; male infertility; protamine

Indexed keywords

BISULFITE; PROTAMINE; PROTAMINE P1; PROTAMINE P2; UNCLASSIFIED DRUG;

EID: 84856368314     PISSN: 00150282     EISSN: 15565653     Source Type: Journal    
DOI: 10.1016/j.fertnstert.2011.11.008     Document Type: Article
Times cited : (92)

References (48)
  • 2
    • 79952545010 scopus 로고    scopus 로고
    • Male infertility: Pathogenesis and clinical diagnosis
    • C. Krausz Male infertility: pathogenesis and clinical diagnosis Best Pract Res Clin Endocrinol Metab 25 2011 271 285
    • (2011) Best Pract Res Clin Endocrinol Metab , vol.25 , pp. 271-285
    • Krausz, C.1
  • 4
    • 75149161556 scopus 로고    scopus 로고
    • Paternal DNA packaging in spermatozoa: More than the sum of its parts? DNA, histones, protamines and epigenetics
    • D. Miller, M. Brinkworth, and D. Iles Paternal DNA packaging in spermatozoa: more than the sum of its parts? DNA, histones, protamines and epigenetics Reproduction 139 2010 287 301
    • (2010) Reproduction , vol.139 , pp. 287-301
    • Miller, D.1    Brinkworth, M.2    Iles, D.3
  • 5
    • 0023839404 scopus 로고
    • Aberrant protamine 1/protamine 2 ratios in sperm of infertile human males
    • R. Balhorn, S. Reed, and N. Tanphaichitr Aberrant protamine 1/protamine 2 ratios in sperm of infertile human males Experientia 44 1988 52 55 (Pubitemid 18058094)
    • (1988) Experientia , vol.44 , Issue.1 , pp. 52-55
    • Balhorn, R.1    Reed, S.2    Tanphaichitr, N.3
  • 6
    • 44049104999 scopus 로고    scopus 로고
    • The protamine family of sperm nuclear proteins
    • R. Balhorn The protamine family of sperm nuclear proteins Genome Biol 8 2007 227
    • (2007) Genome Biol , vol.8 , pp. 227
    • Balhorn, R.1
  • 7
    • 67749114140 scopus 로고    scopus 로고
    • Distinctive chromatin in human sperm packages genes for embryo development
    • S.S. Hammoud, D.A. Nix, H. Zhang, J. Purwar, D.T. Carrell, and B.R. Cairns Distinctive chromatin in human sperm packages genes for embryo development Nature 460 2009 473 478
    • (2009) Nature , vol.460 , pp. 473-478
    • Hammoud, S.S.1    Nix, D.A.2    Zhang, H.3    Purwar, J.4    Carrell, D.T.5    Cairns, B.R.6
  • 8
    • 55449099360 scopus 로고    scopus 로고
    • The aetiology of sperm protamine abnormalities and their potential impact on the sperm epigenome
    • D.T. Carrell, B.R. Emery, and S. Hammoud The aetiology of sperm protamine abnormalities and their potential impact on the sperm epigenome Int J Androl 31 2008 537 545
    • (2008) Int J Androl , vol.31 , pp. 537-545
    • Carrell, D.T.1    Emery, B.R.2    Hammoud, S.3
  • 9
    • 77953292127 scopus 로고    scopus 로고
    • Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa
    • U. Brykczynska, M. Hisano, S. Erkek, L. Ramos, E.J. Oakeley, and T.C. Roloff Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa Nat Struct Mol Biol 17 2010 679 687
    • (2010) Nat Struct Mol Biol , vol.17 , pp. 679-687
    • Brykczynska, U.1    Hisano, M.2    Erkek, S.3    Ramos, L.4    Oakeley, E.J.5    Roloff, T.C.6
  • 10
    • 68149176814 scopus 로고    scopus 로고
    • Endonuclease-sensitive regions of human spermatozoal chromatin are highly enriched in promoter and CTCF binding sequences
    • A. Arpanahi, M. Brinkworth, D. Iles, S.A. Krawetz, A. Paradowska, and A.E. Platts Endonuclease-sensitive regions of human spermatozoal chromatin are highly enriched in promoter and CTCF binding sequences Genome Res 19 2009 1338 1349
    • (2009) Genome Res , vol.19 , pp. 1338-1349
    • Arpanahi, A.1    Brinkworth, M.2    Iles, D.3    Krawetz, S.A.4    Paradowska, A.5    Platts, A.E.6
  • 11
    • 80051949165 scopus 로고    scopus 로고
    • Genome-wide analysis identifies changes in histone retention and epigenetic modifications at developmental and imprinted gene loci in the sperm of infertile men
    • S.S. Hammoud, D.A. Nix, A.O. Hammoud, M. Gibson, B.R. Cairns, and D.T. Carrell Genome-wide analysis identifies changes in histone retention and epigenetic modifications at developmental and imprinted gene loci in the sperm of infertile men Hum Reprod 26 2011 2558 2569
    • (2011) Hum Reprod , vol.26 , pp. 2558-2569
    • Hammoud, S.S.1    Nix, D.A.2    Hammoud, A.O.3    Gibson, M.4    Cairns, B.R.5    Carrell, D.T.6
  • 13
    • 66349111107 scopus 로고    scopus 로고
    • Perturbation of genomic imprinting in oligozoospermia
    • D. Filipponi, and R. Feil Perturbation of genomic imprinting in oligozoospermia Epigenetics 4 2009 27 30
    • (2009) Epigenetics , vol.4 , pp. 27-30
    • Filipponi, D.1    Feil, R.2
  • 14
    • 77957194585 scopus 로고    scopus 로고
    • Alterations in sperm DNA methylation patterns at imprinted loci in two classes of infertility
    • S.S. Hammoud, J. Purwar, C. Pflueger, B.R. Cairns, and D.T. Carrell Alterations in sperm DNA methylation patterns at imprinted loci in two classes of infertility Fertil Steril 94 2010 1728 1733
    • (2010) Fertil Steril , vol.94 , pp. 1728-1733
    • Hammoud, S.S.1    Purwar, J.2    Pflueger, C.3    Cairns, B.R.4    Carrell, D.T.5
  • 15
    • 70450252294 scopus 로고    scopus 로고
    • DNA methylation errors at imprinted loci after assisted conception originate in the parental sperm
    • H. Kobayashi, H. Hiura, R.M. John, A. Sato, E. Otsu, and N. Kobayashi DNA methylation errors at imprinted loci after assisted conception originate in the parental sperm Eur J Hum Genet 17 2009 1582 1591
    • (2009) Eur J Hum Genet , vol.17 , pp. 1582-1591
    • Kobayashi, H.1    Hiura, H.2    John, R.M.3    Sato, A.4    Otsu, E.5    Kobayashi, N.6
  • 17
    • 2442686408 scopus 로고    scopus 로고
    • Genomic imprinting in disruptive spermatogenesis
    • DOI 10.1016/S0140-6736(04)16256-9, PII S0140673604162569
    • C.J. Marques, F. Carvalho, M. Sousa, and A. Barros Genomic imprinting in disruptive spermatogenesis Lancet 363 2004 1700 1702 (Pubitemid 38670329)
    • (2004) Lancet , vol.363 , Issue.9422 , pp. 1700-1702
    • Marques, C.J.1    Carvalho, F.2    Sousa, M.3    Barros, A.4
  • 18
    • 40049100483 scopus 로고    scopus 로고
    • Abnormal methylation of imprinted genes in human sperm is associated with oligozoospermia
    • C.J. Marques, P. Costa, B. Vaz, F. Carvalho, S. Fernandes, and A. Barros Abnormal methylation of imprinted genes in human sperm is associated with oligozoospermia Mol Hum Reprod 14 2008 67 74
    • (2008) Mol Hum Reprod , vol.14 , pp. 67-74
    • Marques, C.J.1    Costa, P.2    Vaz, B.3    Carvalho, F.4    Fernandes, S.5    Barros, A.6
  • 19
    • 77954416527 scopus 로고    scopus 로고
    • Idiopathic male infertility is strongly associated with aberrant methylation of MEST and IGF2/H19 ICR1
    • Poplinski A, Tuttelmann F, Kanber D, Horsthemke B, Gromoll J. Idiopathic male infertility is strongly associated with aberrant methylation of MEST and IGF2/H19 ICR1. Int J Androl 2010;33:642-9.
    • (2010) Int J Androl , vol.33 , pp. 642-649
    • Poplinski, A.1    Tuttelmann, F.2    Kanber, D.3    Horsthemke, B.4    Gromoll, J.5
  • 20
    • 78650414907 scopus 로고    scopus 로고
    • Assessing loss of imprint methylation in sperm from subfertile men using novel methylation polymerase chain reaction Luminex analysis
    • 134.e1-4
    • A. Sato, H. Hiura, H. Okae, N. Miyauchi, Y. Abe, and T. Utsunomiya Assessing loss of imprint methylation in sperm from subfertile men using novel methylation polymerase chain reaction Luminex analysis Fertil Steril 95 2011 129 134 134.e1-4
    • (2011) Fertil Steril , vol.95 , pp. 129-134
    • Sato, A.1    Hiura, H.2    Okae, H.3    Miyauchi, N.4    Abe, Y.5    Utsunomiya, T.6
  • 21
    • 33750162694 scopus 로고    scopus 로고
    • Global sperm deoxyribonucleic acid methylation is unaffected in protamine-deficient infertile males
    • DOI 10.1016/j.fertnstert.2006.04.023, PII S0015028206015007
    • V.W. Aoki, B.R. Emery, and D.T. Carrell Global sperm deoxyribonucleic acid methylation is unaffected in protamine-deficient infertile males Fertil Steril 86 2006 1541 1543 (Pubitemid 44602048)
    • (2006) Fertility and Sterility , vol.86 , Issue.5 , pp. 1541-1543
    • Aoki, V.W.1    Emery, B.R.2    Carrell, D.T.3
  • 22
    • 0141992792 scopus 로고    scopus 로고
    • Quantitation by image analysis of global DNA methylation in human spermatozoa and its prognostic value in in vitro fertilization: A preliminary study
    • DOI 10.1016/S0015-0282(03)01151-8
    • M. Benchaib, M. Ajina, J. Lornage, A. Niveleau, P. Durand, and J.F. Guerin Quantitation by image analysis of global DNA methylation in human spermatozoa and its prognostic value in in vitro fertilization: a preliminary study Fertil Steril 80 2003 947 953 (Pubitemid 37230032)
    • (2003) Fertility and Sterility , vol.80 , Issue.4 , pp. 947-953
    • Benchaib, M.1    Ajina, M.2    Lornage, J.3    Niveleau, A.4    Durand, P.5    Guerin, J.F.6
  • 23
    • 77249094474 scopus 로고    scopus 로고
    • Oxidative DNA damage impairs global sperm DNA methylation in infertile men
    • O. Tunc, and K. Tremellen Oxidative DNA damage impairs global sperm DNA methylation in infertile men J Assist Reprod Genet 26 2009 537 544
    • (2009) J Assist Reprod Genet , vol.26 , pp. 537-544
    • Tunc, O.1    Tremellen, K.2
  • 24
    • 44949259146 scopus 로고    scopus 로고
    • Widespread epigenetic abnormalities suggest a broad DNA methylation erasure defect in abnormal human sperm
    • S. Houshdaran, V.K. Cortessis, K. Siegmund, A. Yang, P.W. Laird, and R.Z. Sokol Widespread epigenetic abnormalities suggest a broad DNA methylation erasure defect in abnormal human sperm PLoS One 2 2007 e1289
    • (2007) PLoS One , vol.2 , pp. 1289
    • Houshdaran, S.1    Cortessis, V.K.2    Siegmund, K.3    Yang, A.4    Laird, P.W.5    Sokol, R.Z.6
  • 25
    • 77956897397 scopus 로고    scopus 로고
    • Incorrect DNA methylation of the DAZL promoter CpG island associates with defective human sperm
    • P. Navarro-Costa, P. Nogueira, M. Carvalho, F. Leal, I. Cordeiro, and C. Calhaz-Jorge Incorrect DNA methylation of the DAZL promoter CpG island associates with defective human sperm Hum Reprod 25 2010 2647 2654
    • (2010) Hum Reprod , vol.25 , pp. 2647-2654
    • Navarro-Costa, P.1    Nogueira, P.2    Carvalho, M.3    Leal, F.4    Cordeiro, I.5    Calhaz-Jorge, C.6
  • 26
    • 77249112916 scopus 로고    scopus 로고
    • Lack of association between DAZ gene methylation patterns and spermatogenic failure
    • W. Wu, C. Lu, Y. Xia, O. Shen, G. Ji, and A. Gu Lack of association between DAZ gene methylation patterns and spermatogenic failure Clin Chem Lab Med 48 2010 355 360
    • (2010) Clin Chem Lab Med , vol.48 , pp. 355-360
    • Wu, W.1    Lu, C.2    Xia, Y.3    Shen, O.4    Ji, G.5    Gu, A.6
  • 27
    • 79952413674 scopus 로고    scopus 로고
    • Analysis of the methylation pattern of six gene promoters in sperm of men with abnormal protamination
    • L. Nanassy, and D.T. Carrell Analysis of the methylation pattern of six gene promoters in sperm of men with abnormal protamination Asian J Androl 13 2011 342 346
    • (2011) Asian J Androl , vol.13 , pp. 342-346
    • Nanassy, L.1    Carrell, D.T.2
  • 28
    • 79956339040 scopus 로고    scopus 로고
    • Abnormal methylation of the promoter of CREM is broadly associated with male factor infertility and poor sperm quality but is improved in sperm selected by density gradient centrifugation
    • L. Nanassy, and D.T. Carrell Abnormal methylation of the promoter of CREM is broadly associated with male factor infertility and poor sperm quality but is improved in sperm selected by density gradient centrifugation Fertil Steril 95 2011 2310 2314
    • (2011) Fertil Steril , vol.95 , pp. 2310-2314
    • Nanassy, L.1    Carrell, D.T.2
  • 29
    • 79957968811 scopus 로고    scopus 로고
    • Integrative DNA methylation and gene expression analyses identify DNA packaging and epigenetic regulatory genes associated with low motility sperm
    • S.E. Pacheco, E.A. Houseman, B.C. Christensen, C.J. Marsit, K.T. Kelsey, and M. Sigman Integrative DNA methylation and gene expression analyses identify DNA packaging and epigenetic regulatory genes associated with low motility sperm PLoS One 6 2011 e20280
    • (2011) PLoS One , vol.6 , pp. 20280
    • Pacheco, S.E.1    Houseman, E.A.2    Christensen, B.C.3    Marsit, C.J.4    Kelsey, K.T.5    Sigman, M.6
  • 30
    • 33750198561 scopus 로고    scopus 로고
    • Sperm protamine 1/protamine 2 ratios are related to in vitro fertilization pregnancy rates and predictive of fertilization ability
    • DOI 10.1016/j.fertnstert.2006.04.024, PII S0015028206015020
    • V.W. Aoki, L. Liu, K.P. Jones, H.H. Hatasaka, M. Gibson, and C.M. Peterson Sperm protamine 1/protamine 2 ratios are related to in vitro fertilization pregnancy rates and predictive of fertilization ability Fertil Steril 86 2006 1408 1415 (Pubitemid 44602050)
    • (2006) Fertility and Sterility , vol.86 , Issue.5 , pp. 1408-1415
    • Aoki, V.W.1    Liu, L.2    Jones, K.P.3    Hatasaka, H.H.4    Gibson, M.5    Peterson, C.M.6    Carrell, D.T.7
  • 32
    • 52949118548 scopus 로고    scopus 로고
    • Model-based clustering of DNA methylation array data: A recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions
    • E.A. Houseman, B.C. Christensen, R.F. Yeh, C.J. Marsit, M.R. Karagas, and M. Wrensch Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions BMC Bioinformatics 9 2008 365
    • (2008) BMC Bioinformatics , vol.9 , pp. 365
    • Houseman, E.A.1    Christensen, B.C.2    Yeh, R.F.3    Marsit, C.J.4    Karagas, M.R.5    Wrensch, M.6
  • 33
    • 69449083962 scopus 로고    scopus 로고
    • Integrated microarray and multiplex cytokine analyses of Kaposi's Sarcoma Associated Herpesvirus viral FLICE Inhibitory Protein K13 affected genes and cytokines in human blood vascular endothelial cells
    • V. Punj, H. Matta, S. Schamus, and P.M. Chaudhary Integrated microarray and multiplex cytokine analyses of Kaposi's Sarcoma Associated Herpesvirus viral FLICE Inhibitory Protein K13 affected genes and cytokines in human blood vascular endothelial cells BMC Med Genomics 2 2009 50
    • (2009) BMC Med Genomics , vol.2 , pp. 50
    • Punj, V.1    Matta, H.2    Schamus, S.3    Chaudhary, P.M.4
  • 36
    • 78649475003 scopus 로고    scopus 로고
    • Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis
    • P. Du, X. Zhang, C.C. Huang, N. Jafari, W.A. Kibbe, and L. Hou Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis BMC Bioinformatics 11 2010 587
    • (2010) BMC Bioinformatics , vol.11 , pp. 587
    • Du, P.1    Zhang, X.2    Huang, C.C.3    Jafari, N.4    Kibbe, W.A.5    Hou, L.6
  • 37
    • 78049243483 scopus 로고    scopus 로고
    • Aberrant DNA methylation of imprinted H19 gene in human preimplantation embryos
    • 2358.e1
    • S.L. Chen, X.Y. Shi, H.Y. Zheng, F.R. Wu, and C. Luo Aberrant DNA methylation of imprinted H19 gene in human preimplantation embryos Fertil Steril 94 2010 2356 2358 2358.e1
    • (2010) Fertil Steril , vol.94 , pp. 2356-2358
    • Chen, S.L.1    Shi, X.Y.2    Zheng, H.Y.3    Wu, F.R.4    Luo, C.5
  • 38
    • 84934442861 scopus 로고    scopus 로고
    • Somatic cell nuclear transfer (SCNT) in mammals: The cytoplast and its reprogramming activities
    • J. Fulka Jr., and H. Fulka Somatic cell nuclear transfer (SCNT) in mammals: the cytoplast and its reprogramming activities Adv Exp Med Biol 591 2007 93 102
    • (2007) Adv Exp Med Biol , vol.591 , pp. 93-102
    • Fulka, Jr.J.1    Fulka, H.2
  • 39
    • 0036733675 scopus 로고    scopus 로고
    • Chromatin modification and epigenetic reprogramming in mammalian development
    • DOI 10.1038/nrg887
    • E. Li Chromatin modification and epigenetic reprogramming in mammalian development Nat Rev Genet 3 2002 662 673 (Pubitemid 34984255)
    • (2002) Nature Reviews Genetics , vol.3 , Issue.9 , pp. 662-673
    • Li, E.1
  • 40
    • 34548058909 scopus 로고    scopus 로고
    • Adverse effects of 5-aza-2′-deoxycytidine on spermatogenesis include reduced sperm function and selective inhibition of de novo DNA methylation
    • DOI 10.1124/jpet.107.121699
    • C.C. Oakes, T.L. Kelly, B. Robaire, and J.M. Trasler Adverse effects of 5-aza-2′-deoxycytidine on spermatogenesis include reduced sperm function and selective inhibition of de novo DNA methylation J Pharmacol Exp Ther 322 2007 1171 1180 (Pubitemid 47295822)
    • (2007) Journal of Pharmacology and Experimental Therapeutics , vol.322 , Issue.3 , pp. 1171-1180
    • Oakes, C.C.1    Kelly, T.L.J.2    Robaire, B.3    Trasler, J.M.4
  • 41
    • 0242709951 scopus 로고    scopus 로고
    • 5-Aza-2′-Deoxycytidine Induces Alterations in Murine Spermatogenesis and Pregnancy Outcome
    • T.L. Kelly, E. Li, and J.M. Trasler 5-aza-2′-deoxycytidine induces alterations in murine spermatogenesis and pregnancy outcome J Androl 24 2003 822 830 (Pubitemid 37370538)
    • (2003) Journal of Andrology , vol.24 , Issue.6 , pp. 822-830
    • Kelly, T.L.J.1    Li, E.2    Trasler, J.M.3
  • 42
    • 0029858377 scopus 로고    scopus 로고
    • Developmental exposure of male germ cells to 5-azacytidine results in abnormal preimplantation development in rats
    • DOI 10.1095/biolreprod55.5.1155
    • T. Doerksen, and J.M. Trasler Developmental exposure of male germ cells to 5-azacytidine results in abnormal preimplantation development in rats Biol Reprod 55 1996 1155 1162 (Pubitemid 26346552)
    • (1996) Biology of Reproduction , vol.55 , Issue.5 , pp. 1155-1162
    • Doerksen, T.1    Trasler, J.M.2
  • 43
    • 34347241706 scopus 로고    scopus 로고
    • Altered protamine expression and diminished spermatogenesis: What is the link?
    • DOI 10.1093/humupd/dml057
    • D.T. Carrell, B.R. Emery, and S. Hammoud Altered protamine expression and diminished spermatogenesis: what is the link? Hum Reprod Update 13 2007 313 327 (Pubitemid 47061636)
    • (2007) Human Reproduction Update , vol.13 , Issue.3 , pp. 313-327
    • Carrell, D.T.1    Emery, B.R.2    Hammoud, S.3
  • 44
    • 0346025474 scopus 로고    scopus 로고
    • Human protamines and the developing spermatid: Their structure, function, expression and relationship with male infertility
    • V.W. Aoki, and D.T. Carrell Human protamines and the developing spermatid: their structure, function, expression and relationship with male infertility Asian J Androl 5 2003 315 324 (Pubitemid 38072773)
    • (2003) Asian Journal of Andrology , vol.5 , Issue.4 , pp. 315-324
    • Aoki, V.W.1    Carrell, D.T.2
  • 45
    • 33745255403 scopus 로고    scopus 로고
    • Protamines and male infertility
    • DOI 10.1093/humupd/dml009
    • R. Oliva Protamines and male infertility Hum Reprod Update 12 2006 417 435 (Pubitemid 43923415)
    • (2006) Human Reproduction Update , vol.12 , Issue.4 , pp. 417-435
    • Oliva, R.1
  • 47
    • 34247468830 scopus 로고    scopus 로고
    • The maternal-zygotic transition: Death and birth of RNAs
    • DOI 10.1126/science.1140693
    • A.F. Schier The maternal-zygotic transition: death and birth of RNAs Science 316 2007 406 407 (Pubitemid 46651481)
    • (2007) Science , vol.316 , Issue.5823 , pp. 406-407
    • Schier, A.F.1


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