-
1
-
-
33646070846
-
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
-
Bernstein B.E., Mikkelsen T.S., Xie X., Kamal M., Huebert D.J., Cuff J., Fry B., Meissner A., Wernig M., Plath K., et al. A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell 2006, 125:315-326.
-
(2006)
Cell
, vol.125
, pp. 315-326
-
-
Bernstein, B.E.1
Mikkelsen, T.S.2
Xie, X.3
Kamal, M.4
Huebert, D.J.5
Cuff, J.6
Fry, B.7
Meissner, A.8
Wernig, M.9
Plath, K.10
-
2
-
-
33646870495
-
Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions
-
Bracken A.P., Dietrich N., Pasini D., Hansen K.H., Helin K. Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions. Genes Dev. 2006, 20:1123-1136.
-
(2006)
Genes Dev.
, vol.20
, pp. 1123-1136
-
-
Bracken, A.P.1
Dietrich, N.2
Pasini, D.3
Hansen, K.H.4
Helin, K.5
-
3
-
-
7544230144
-
The Polycomb Ezh2 methyltransferase regulates muscle gene expression and skeletal muscle differentiation
-
Caretti G., Di Padova M., Micales B., Lyons G.E., Sartorelli V. The Polycomb Ezh2 methyltransferase regulates muscle gene expression and skeletal muscle differentiation. Genes Dev. 2004, 18:2627-2638.
-
(2004)
Genes Dev.
, vol.18
, pp. 2627-2638
-
-
Caretti, G.1
Di Padova, M.2
Micales, B.3
Lyons, G.E.4
Sartorelli, V.5
-
4
-
-
65249093055
-
Polycomb protein Ezh2 regulates pancreatic beta-cell Ink4a/Arf expression and regeneration in diabetes mellitus
-
Chen H., Gu X., Su I.H., Bottino R., Contreras J.L., Tarakhovsky A., Kim S.K. Polycomb protein Ezh2 regulates pancreatic beta-cell Ink4a/Arf expression and regeneration in diabetes mellitus. Genes Dev. 2009, 23:975-985.
-
(2009)
Genes Dev.
, vol.23
, pp. 975-985
-
-
Chen, H.1
Gu, X.2
Su, I.H.3
Bottino, R.4
Contreras, J.L.5
Tarakhovsky, A.6
Kim, S.K.7
-
5
-
-
58049191558
-
Chromatin signatures in multipotent human hematopoietic stem cells indicate the fate of bivalent genes during differentiation
-
Cui K., Zang C., Roh T.Y., Schones D.E., Childs R.W., Peng W., Zhao K. Chromatin signatures in multipotent human hematopoietic stem cells indicate the fate of bivalent genes during differentiation. Cell Stem Cell 2009, 4:80-93.
-
(2009)
Cell Stem Cell
, vol.4
, pp. 80-93
-
-
Cui, K.1
Zang, C.2
Roh, T.Y.3
Schones, D.E.4
Childs, R.W.5
Peng, W.6
Zhao, K.7
-
6
-
-
0038005018
-
DAVID: Database for Annotation, Visualization, and Integrated Discovery
-
Dennis G., Sherman B.T., Hosack D.A., Yang J., Gao W., Lane H.C., Lempicki R.A. DAVID: Database for Annotation, Visualization, and Integrated Discovery. Genome Biol. 2003, 4:3.
-
(2003)
Genome Biol.
, vol.4
, pp. 3
-
-
Dennis, G.1
Sherman, B.T.2
Hosack, D.A.3
Yang, J.4
Gao, W.5
Lane, H.C.6
Lempicki, R.A.7
-
7
-
-
62149122634
-
Ezh2 orchestrates gene expression for the stepwise differentiation of tissue-specific stem cells
-
Ezhkova E., Pasolli H.A., Parker J.S., Stokes N., Su I.H., Hannon G., Tarakhovsky A., Fuchs E. Ezh2 orchestrates gene expression for the stepwise differentiation of tissue-specific stem cells. Cell 2009, 136:1122-1135.
-
(2009)
Cell
, vol.136
, pp. 1122-1135
-
-
Ezhkova, E.1
Pasolli, H.A.2
Parker, J.S.3
Stokes, N.4
Su, I.H.5
Hannon, G.6
Tarakhovsky, A.7
Fuchs, E.8
-
8
-
-
79952220410
-
EZH1 and EZH2 cogovern histone H3K27 trimethylation and are essential for hair follicle homeostasis and wound repair
-
Ezhkova E., Lien W.H., Stokes N., Pasolli H.A., Silva J.M., Fuchs E. EZH1 and EZH2 cogovern histone H3K27 trimethylation and are essential for hair follicle homeostasis and wound repair. Genes Dev. 2011, 25:485-498.
-
(2011)
Genes Dev.
, vol.25
, pp. 485-498
-
-
Ezhkova, E.1
Lien, W.H.2
Stokes, N.3
Pasolli, H.A.4
Silva, J.M.5
Fuchs, E.6
-
9
-
-
0031699524
-
The Polycomb-group gene eed is required for normal morphogenetic movements during gastrulation in the mouse embryo
-
Faust C., Lawson K.A., Schork N.J., Thiel B., Magnuson T. The Polycomb-group gene eed is required for normal morphogenetic movements during gastrulation in the mouse embryo. Development 1998, 125:4495-4506.
-
(1998)
Development
, vol.125
, pp. 4495-4506
-
-
Faust, C.1
Lawson, K.A.2
Schork, N.J.3
Thiel, B.4
Magnuson, T.5
-
10
-
-
77957757417
-
A Myc network accounts for similarities between embryonic stem and cancer cell transcription programs
-
Kim J., Woo A.J., Chu J., Snow J.W., Fujiwara Y., Kim C.G., Cantor A.B., Orkin S.H. A Myc network accounts for similarities between embryonic stem and cancer cell transcription programs. Cell 2010, 143:313-324.
-
(2010)
Cell
, vol.143
, pp. 313-324
-
-
Kim, J.1
Woo, A.J.2
Chu, J.3
Snow, J.W.4
Fujiwara, Y.5
Kim, C.G.6
Cantor, A.B.7
Orkin, S.H.8
-
11
-
-
0030922630
-
Mammalian homologues of the Polycomb-group gene Enhancer of zeste mediate gene silencing in Drosophila heterochromatin and at S. cerevisiae telomeres
-
Laible G., Wolf A., Dorn R., Reuter G., Nislow C., Lebersorger A., Popkin D., Pillus L., Jenuwein T. Mammalian homologues of the Polycomb-group gene Enhancer of zeste mediate gene silencing in Drosophila heterochromatin and at S. cerevisiae telomeres. EMBO J. 1997, 16:3219-3232.
-
(1997)
EMBO J.
, vol.16
, pp. 3219-3232
-
-
Laible, G.1
Wolf, A.2
Dorn, R.3
Reuter, G.4
Nislow, C.5
Lebersorger, A.6
Popkin, D.7
Pillus, L.8
Jenuwein, T.9
-
12
-
-
0030038664
-
E(z): a polycomb group gene or a trithorax group gene?
-
LaJeunesse D., Shearn A. E(z): a polycomb group gene or a trithorax group gene?. Development 1996, 122:2189-2197.
-
(1996)
Development
, vol.122
, pp. 2189-2197
-
-
LaJeunesse, D.1
Shearn, A.2
-
13
-
-
55949132133
-
Ezh1 and Ezh2 maintain repressive chromatin through different mechanisms
-
Margueron R., Li G., Sarma K., Blais A., Zavadil J., Woodcock C.L., Dynlacht B.D., Reinberg D. Ezh1 and Ezh2 maintain repressive chromatin through different mechanisms. Mol. Cell 2008, 32:503-518.
-
(2008)
Mol. Cell
, vol.32
, pp. 503-518
-
-
Margueron, R.1
Li, G.2
Sarma, K.3
Blais, A.4
Zavadil, J.5
Woodcock, C.L.6
Dynlacht, B.D.7
Reinberg, D.8
-
14
-
-
34248169728
-
Thepolycomb group protein Suz12 is required for embryonic stem cell differentiation
-
Pasini D., Bracken A.P., Hansen J.B., Capillo M., Helin K. Thepolycomb group protein Suz12 is required for embryonic stem cell differentiation. Mol. Cell. Biol. 2007, 27:3769-3779.
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 3769-3779
-
-
Pasini, D.1
Bracken, A.P.2
Hansen, J.B.3
Capillo, M.4
Helin, K.5
-
15
-
-
77949414371
-
JARID2 regulates binding of the Polycomb repressive complex 2 to target genes in ES cells
-
Pasini D., Cloos P.A., Walfridsson J., Olsson L., Bukowski J.P., Johansen J.V., Bak M., Tommerup N., Rappsilber J., Helin K. JARID2 regulates binding of the Polycomb repressive complex 2 to target genes in ES cells. Nature 2010, 464:306-310.
-
(2010)
Nature
, vol.464
, pp. 306-310
-
-
Pasini, D.1
Cloos, P.A.2
Walfridsson, J.3
Olsson, L.4
Bukowski, J.P.5
Johansen, J.V.6
Bak, M.7
Tommerup, N.8
Rappsilber, J.9
Helin, K.10
-
16
-
-
77951920690
-
C-Myc regulates transcriptional pause release
-
Rahl P.B., Lin C.Y., Seila A.C., Flynn R.A., McCuine S., Burge C.B., Sharp P.A., Young R.A. c-Myc regulates transcriptional pause release. Cell 2010, 141:432-445.
-
(2010)
Cell
, vol.141
, pp. 432-445
-
-
Rahl, P.B.1
Lin, C.Y.2
Seila, A.C.3
Flynn, R.A.4
McCuine, S.5
Burge, C.B.6
Sharp, P.A.7
Young, R.A.8
-
17
-
-
33751534830
-
The transition between transcriptional initiation and elongation in E. coli is highly variable and often rate limiting
-
Reppas N.B., Wade J.T., Church G.M., Struhl K. The transition between transcriptional initiation and elongation in E. coli is highly variable and often rate limiting. Mol. Cell 2006, 24:747-757.
-
(2006)
Mol. Cell
, vol.24
, pp. 747-757
-
-
Reppas, N.B.1
Wade, J.T.2
Church, G.M.3
Struhl, K.4
-
18
-
-
77956222562
-
Polycomb group proteins: multi-faceted regulators of somatic stem cells and cancer
-
Sauvageau M., Sauvageau G. Polycomb group proteins: multi-faceted regulators of somatic stem cells and cancer. Cell Stem Cell 2010, 7:299-313.
-
(2010)
Cell Stem Cell
, vol.7
, pp. 299-313
-
-
Sauvageau, M.1
Sauvageau, G.2
-
19
-
-
55949124844
-
EZH1 mediates methylation on histone H3 lysine 27 and complements EZH2 in maintaining stem cell identity and executing pluripotency
-
Shen X., Liu Y., Hsu Y.J., Fujiwara Y., Kim J., Mao X., Yuan G.C., Orkin S.H. EZH1 mediates methylation on histone H3 lysine 27 and complements EZH2 in maintaining stem cell identity and executing pluripotency. Mol. Cell 2008, 32:491-502.
-
(2008)
Mol. Cell
, vol.32
, pp. 491-502
-
-
Shen, X.1
Liu, Y.2
Hsu, Y.J.3
Fujiwara, Y.4
Kim, J.5
Mao, X.6
Yuan, G.C.7
Orkin, S.H.8
-
20
-
-
70349469565
-
Mechanisms of polycomb gene silencing: knowns and unknowns
-
Simon J.A., Kingston R.E. Mechanisms of polycomb gene silencing: knowns and unknowns. Nat. Rev. Mol. Cell Biol. 2009, 10:697-708.
-
(2009)
Nat. Rev. Mol. Cell Biol.
, vol.10
, pp. 697-708
-
-
Simon, J.A.1
Kingston, R.E.2
-
21
-
-
0037320925
-
Ezh2 controls B cell development through histone H3 methylation and Igh rearrangement
-
Su I.H., Basavaraj A., Krutchinsky A.N., Hobert O., Ullrich A., Chait B.T., Tarakhovsky A. Ezh2 controls B cell development through histone H3 methylation and Igh rearrangement. Nat. Immunol. 2003, 4:124-131.
-
(2003)
Nat. Immunol.
, vol.4
, pp. 124-131
-
-
Su, I.H.1
Basavaraj, A.2
Krutchinsky, A.N.3
Hobert, O.4
Ullrich, A.5
Chait, B.T.6
Tarakhovsky, A.7
-
22
-
-
77956202054
-
Polycomb group proteins set the stage for early lineage commitment
-
Surface L.E., Thornton S.R., Boyer L.A. Polycomb group proteins set the stage for early lineage commitment. Cell Stem Cell 2010, 7:288-298.
-
(2010)
Cell Stem Cell
, vol.7
, pp. 288-298
-
-
Surface, L.E.1
Thornton, S.R.2
Boyer, L.A.3
-
23
-
-
65449136284
-
TopHat: discovering splice junctions with RNA-Seq
-
Trapnell C., Pachter L., Salzberg S.L. TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 2009, 25:1105-1111.
-
(2009)
Bioinformatics
, vol.25
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
24
-
-
33751092246
-
A protein interaction network for pluripotency of embryonic stem cells
-
Wang J., Rao S., Chu J., Shen X., Levasseur D.N., Theunissen T.W., Orkin S.H. A protein interaction network for pluripotency of embryonic stem cells. Nature 2006, 444:364-368.
-
(2006)
Nature
, vol.444
, pp. 364-368
-
-
Wang, J.1
Rao, S.2
Chu, J.3
Shen, X.4
Levasseur, D.N.5
Theunissen, T.W.6
Orkin, S.H.7
-
25
-
-
67650711619
-
Aclustering approach for identification of enriched domains from histone modification ChIP-Seq data
-
Zang C., Schones D.E., Zeng C., Cui K., Zhao K., Peng W. Aclustering approach for identification of enriched domains from histone modification ChIP-Seq data. Bioinformatics 2009, 25:1952-1958.
-
(2009)
Bioinformatics
, vol.25
, pp. 1952-1958
-
-
Zang, C.1
Schones, D.E.2
Zeng, C.3
Cui, K.4
Zhao, K.5
Peng, W.6
|