메뉴 건너뛰기




Volumn 131, Issue 3, 2012, Pages 765-775

Bc-GenExMiner: An easy-to-use online platform for gene prognostic analyses in breast cancer

Author keywords

Breast cancer; Genomic data; Molecular subtype; Prognostic analysis; Web tool

Indexed keywords

ESTROGEN RECEPTOR; PROTEIN NODAL;

EID: 84856229628     PISSN: 01676806     EISSN: 15737217     Source Type: Journal    
DOI: 10.1007/s10549-011-1457-7     Document Type: Article
Times cited : (308)

References (26)
  • 3
    • 28344454000 scopus 로고    scopus 로고
    • Molecular classification and molecular forecasting of breast cancer: Ready for clinical application?
    • 16145060 10.1200/JCO.2005.03.3845 1:CAS:528:DC%2BD2MXhtF2nsLrJ
    • JD Brenton LA Carey AA Ahmed C Caldas 2005 Molecular classification and molecular forecasting of breast cancer: ready for clinical application? J Clin Oncol 23 7350 7360 16145060 10.1200/JCO.2005.03.3845 1:CAS:528: DC%2BD2MXhtF2nsLrJ
    • (2005) J Clin Oncol , vol.23 , pp. 7350-7360
    • Brenton, J.D.1    Carey, L.A.2    Ahmed, A.A.3    Caldas, C.4
  • 4
    • 70149113077 scopus 로고    scopus 로고
    • R Development Core Team. R Foundation for Statistical Computing Vienna
    • R Development Core Team (2009) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna
    • (2009) R: A Language and Environment for Statistical Computing
  • 6
    • 75449095004 scopus 로고    scopus 로고
    • Survival: Survival analysis, including penalised likelihood
    • and original R port by Thomas Lumley
    • Therneau T and original R port by Thomas Lumley (2009) Survival: Survival analysis, including penalised likelihood. R package version 2.35-4. http://CRAN.R-project.org/package=survival
    • (2009) R Package Version 2.35-4
    • Therneau, T.1
  • 7
    • 0036081355 scopus 로고    scopus 로고
    • Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
    • 11752295 10.1093/nar/30.1.207 1:CAS:528:DC%2BD38Xht12kurs%3D
    • R Edgar M Domrachev AE Lash 2002 Gene Expression Omnibus: NCBI gene expression and hybridization array data repository Nucleic Acids Res 30 207 210 11752295 10.1093/nar/30.1.207 1:CAS:528:DC%2BD38Xht12kurs%3D
    • (2002) Nucleic Acids Res , vol.30 , pp. 207-210
    • Edgar, R.1    Domrachev, M.2    Lash, A.E.3
  • 11
    • 42649134796 scopus 로고    scopus 로고
    • Merging two gene-expression studies via cross-platform normalization
    • 18325927 10.1093/bioinformatics/btn083 1:CAS:528:DC%2BD1cXlt1agsLs%3D
    • AA Shabalin H Tjelmeland C Fan CM Perou AB Nobel 2008 Merging two gene-expression studies via cross-platform normalization Bioinformatics 24 1154 1160 18325927 10.1093/bioinformatics/btn083 1:CAS:528:DC%2BD1cXlt1agsLs%3D
    • (2008) Bioinformatics , vol.24 , pp. 1154-1160
    • Shabalin, A.A.1    Tjelmeland, H.2    Fan, C.3    Perou, C.M.4    Nobel, A.B.5
  • 12
    • 77950308839 scopus 로고    scopus 로고
    • Breast cancer molecular profiling with single sample predictors: A retrospective analysis
    • 20181526 10.1016/S1470-2045(10)70008-5 1:CAS:528:DC%2BC3cXjvF2nurY%3D
    • B Weigelt A Mackay R A'hern R Natrajan DS Tan M Dowsett A Ashworth JS Reis-Filho 2010 Breast cancer molecular profiling with single sample predictors: a retrospective analysis Lancet Oncol 11 339 349 20181526 10.1016/S1470- 2045(10)70008-5 1:CAS:528:DC%2BC3cXjvF2nurY%3D
    • (2010) Lancet Oncol , vol.11 , pp. 339-349
    • Weigelt, B.1    MacKay, A.2    A'Hern, R.3    Natrajan, R.4    Tan, D.S.5    Dowsett, M.6    Ashworth, A.7    Reis-Filho, J.S.8
  • 16
    • 84856220679 scopus 로고    scopus 로고
    • Enefu: Relevant functions for gene expression analysis, especially in breast cancer
    • Haibe-Kains B, Bontempi G, Quackenbush JF et al (2010) genefu: Relevant functions for gene expression analysis, especially in breast cancer. R package version 1.0.9. http://CRAN.R-project.org/package=genefu
    • (2010) R Package Version 1.0.9.
    • Haibe-Kains, B.1    Bontempi, G.2    Quackenbush, J.F.3
  • 17
    • 51349088017 scopus 로고    scopus 로고
    • Biological processes associated with breast cancer clinical outcome depend on the molecular subtypes
    • 18698033 10.1158/1078-0432.CCR-07-4756 1:CAS:528:DC%2BD1cXpslKgur4%3D
    • C Desmedt B Haibe-Kains P Wirapati M Buyse D Larsimont G Bontempi M Delorenzi M Piccart C Sotiriou 2008 Biological processes associated with breast cancer clinical outcome depend on the molecular subtypes Clin Cancer Res 14 5158 5165 18698033 10.1158/1078-0432.CCR-07-4756 1:CAS:528:DC%2BD1cXpslKgur4%3D
    • (2008) Clin Cancer Res , vol.14 , pp. 5158-5165
    • Desmedt, C.1    Haibe-Kains, B.2    Wirapati, P.3    Buyse, M.4    Larsimont, D.5    Bontempi, G.6    Delorenzi, M.7    Piccart, M.8    Sotiriou, C.9
  • 19
    • 0026808390 scopus 로고
    • The Nottingham prognostic index in primary breast cancer
    • 1391987 10.1007/BF01840834 1:STN:280:DyaK3s%2FgsVyisA%3D%3D
    • MH Galea RW Blamey CE Elston IO Ellis 1992 The Nottingham prognostic index in primary breast cancer Breast Cancer Res Treat 22 207 219 1391987 10.1007/BF01840834 1:STN:280:DyaK3s%2FgsVyisA%3D%3D
    • (1992) Breast Cancer Res Treat , vol.22 , pp. 207-219
    • Galea, M.H.1    Blamey, R.W.2    Elston, C.E.3    Ellis, I.O.4
  • 20
    • 0035865149 scopus 로고    scopus 로고
    • Computer program to assist in making decisions about adjuvant therapy for women with early breast cancer
    • 11181660 1:STN:280:DC%2BD3M3gsFalsg%3D%3D
    • PM Ravdin LA Siminoff GJ Davis MB Mercer J Hewlett N Gerson HL Parker 2001 Computer program to assist in making decisions about adjuvant therapy for women with early breast cancer J Clin Oncol 19 980 991 11181660 1:STN:280:DC%2BD3M3gsFalsg%3D%3D
    • (2001) J Clin Oncol , vol.19 , pp. 980-991
    • Ravdin, P.M.1    Siminoff, L.A.2    Davis, G.J.3    Mercer, M.B.4    Hewlett, J.5    Gerson, N.6    Parker, H.L.7
  • 21
    • 84973587732 scopus 로고
    • A coefficient of agreement for nominal scales
    • 10.1177/001316446002000104
    • J Cohen 1960 A coefficient of agreement for nominal scales Educ Psychol Meas 20 37 46 10.1177/001316446002000104
    • (1960) Educ Psychol Meas , vol.20 , pp. 37-46
    • Cohen, J.1
  • 22
    • 0017360990 scopus 로고
    • The measurement of observer agreement for categorical data
    • 843571 10.2307/2529310 1:STN:280:DyaE2s7jsFWqtA%3D%3D
    • JR Landis GG Koch 1977 The measurement of observer agreement for categorical data Biometrics 33 159 174 843571 10.2307/2529310 1:STN:280:DyaE2s7jsFWqtA%3D%3D
    • (1977) Biometrics , vol.33 , pp. 159-174
    • Landis, J.R.1    Koch, G.G.2
  • 23
    • 33645960993 scopus 로고    scopus 로고
    • Activation of multiple cancer-associated genes at the ERBB2 amplicon in breast cancer
    • 16601278 10.1677/erc.1.01147 1:CAS:528:DC%2BD28XltlKktbo%3D
    • P Kauraniemi A Kallioniemi 2006 Activation of multiple cancer-associated genes at the ERBB2 amplicon in breast cancer Endocr Relat Cancer 13 39 49 16601278 10.1677/erc.1.01147 1:CAS:528:DC%2BD28XltlKktbo%3D
    • (2006) Endocr Relat Cancer , vol.13 , pp. 39-49
    • Kauraniemi, P.1    Kallioniemi, A.2
  • 25
    • 33748988736 scopus 로고    scopus 로고
    • Increased expression of urokinase-type plasminogen activator mRNA determines adverse prognosis in ErbB2-positive primary breast cancer
    • 16963728 10.1200/JCO.2005.05.1912 1:CAS:528:DC%2BD28XhtVGju7vL
    • P Urban V Vuaroqueaux M Labuhn M Delorenzi P Wirapati E Wight HJ Senn C Benz U Eppenberger S Eppenberger-Castori 2006 Increased expression of urokinase-type plasminogen activator mRNA determines adverse prognosis in ErbB2-positive primary breast cancer J Clin Oncol 24 4245 4253 16963728 10.1200/JCO.2005.05.1912 1:CAS:528:DC%2BD28XhtVGju7vL
    • (2006) J Clin Oncol , vol.24 , pp. 4245-4253
    • Urban, P.1    Vuaroqueaux, V.2    Labuhn, M.3    Delorenzi, M.4    Wirapati, P.5    Wight, E.6    Senn, H.J.7    Benz, C.8    Eppenberger, U.9    Eppenberger-Castori, S.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.