-
1
-
-
16244403024
-
Text-mining approaches in molecular biology and biomedicine
-
Krallinger M., Erhardt R.A., Valencia A. Text-mining approaches in molecular biology and biomedicine. Drug Discov Today 2005, 10:439-445.
-
(2005)
Drug Discov Today
, vol.10
, pp. 439-445
-
-
Krallinger, M.1
Erhardt, R.A.2
Valencia, A.3
-
2
-
-
58149460574
-
Literature mining in support of drug discovery
-
Agarwal P., Searls D.B. Literature mining in support of drug discovery. Brief Bioinform 2008, 9:479-492.
-
(2008)
Brief Bioinform
, vol.9
, pp. 479-492
-
-
Agarwal, P.1
Searls, D.B.2
-
3
-
-
67649382957
-
Literature mining on pharmacokinetics numerical data: a feasibility study
-
Wang Z., Kim S., Quinney S.K., Guo Y., Hall S.D., et al. Literature mining on pharmacokinetics numerical data: a feasibility study. J Biomed Inform 2009, 42(4):726-735.
-
(2009)
J Biomed Inform
, vol.42
, Issue.4
, pp. 726-735
-
-
Wang, Z.1
Kim, S.2
Quinney, S.K.3
Guo, Y.4
Hall, S.D.5
-
4
-
-
70449720821
-
Text mining and manual curation of chemical-gene-disease networks for the comparative toxicogenomics database (CTD)
-
Wiegers T.C., Davis A.P., Cohen K.B., Hirschman L., Mattingly C.J. Text mining and manual curation of chemical-gene-disease networks for the comparative toxicogenomics database (CTD). BMC Bioinform 2009, 10:326.
-
(2009)
BMC Bioinform
, vol.10
, pp. 326
-
-
Wiegers, T.C.1
Davis, A.P.2
Cohen, K.B.3
Hirschman, L.4
Mattingly, C.J.5
-
6
-
-
0029989103
-
An analysis of statistical term strength and its use in the indexing and retrieval of molecular biology texts
-
Wilbur W.J., Yang Y. An analysis of statistical term strength and its use in the indexing and retrieval of molecular biology texts. Comput Biol Med 1996, 26:209-222.
-
(1996)
Comput Biol Med
, vol.26
, pp. 209-222
-
-
Wilbur, W.J.1
Yang, Y.2
-
7
-
-
77955287813
-
An overview of MetaMap: historical perspective and recent advances
-
Aronson A.R., Lang F.M. An overview of MetaMap: historical perspective and recent advances. J Am Med Inform Assoc 2010, 17:229-236. 10.1136/jamia.2009.002733.
-
(2010)
J Am Med Inform Assoc
, vol.17
, pp. 229-236
-
-
Aronson, A.R.1
Lang, F.M.2
-
8
-
-
84908087913
-
Understanding PubMed user search behavior through log analysis. Database
-
bap018, doi:10.1093/database/bap018
-
Dogan RI, Murray GC, Névéol A, Zhiyong Lu. Understanding PubMed user search behavior through log analysis. Database; 2009:bap018. doi:10.1093/database/bap018.
-
(2009)
-
-
Dogan, R.I.1
Murray, G.C.2
Névéol, A.3
Zhiyong, L.U.4
-
9
-
-
53949095382
-
Analysis of queries sent to PubMed at the point of care: observation of search behaviour in a medical teaching hospital
-
doi:10.1186/1472-6947-8-42
-
Hoogendam A, Stalenhoef FH, de Vries Robbé PF, Overbeke A John. Analysis of queries sent to PubMed at the point of care: observation of search behaviour in a medical teaching hospital. BMC Med Inform Decis Making 2008;8:42. doi:10.1186/1472-6947-8-42.
-
(2008)
BMC Med Inform Decis Making
, vol.8
, pp. 42
-
-
Hoogendam, A.1
Stalenhoef, F.H.2
de Vries Robbé, P.F.3
Overbeke, A.J.4
-
10
-
-
34347381922
-
Utilization of the PICO framework to improve searching PubMed for clinical questions
-
doi:10.1186/1472-6947-7-16
-
Schardt C, Adams MB, Owens T, Keitz S, Fontelo P. Utilization of the PICO framework to improve searching PubMed for clinical questions BMC Med Inform Decis Making 2007;7:16. doi:10.1186/1472-6947-7-16.
-
(2007)
BMC Med Inform Decis Making
, vol.7
, pp. 16
-
-
Schardt, C.1
Adams, M.B.2
Owens, T.3
Keitz, S.4
Fontelo, P.5
-
11
-
-
9344258385
-
The Unified Medical Language System (UMLS) project
-
Marcel Dekker, Inc, New York, A. Kent, C.M. Hall (Eds.)
-
Nelson S.J., Powell T., Humphreys B.L. The Unified Medical Language System (UMLS) project. Encyclopedia of library and information science 2002, 369-378. Marcel Dekker, Inc, New York. A. Kent, C.M. Hall (Eds.).
-
(2002)
Encyclopedia of library and information science
, pp. 369-378
-
-
Nelson, S.J.1
Powell, T.2
Humphreys, B.L.3
-
12
-
-
84855972936
-
Özsu M Tamer. Encyclopedia of database systems. Springer-Verlag
-
ISBN: 978-0387355443.
-
Liu Ling, özsu M Tamer. Encyclopedia of database systems. Springer-Verlag; 2009. ISBN: 978-0387355443.
-
(2009)
-
-
Liu, L.1
-
13
-
-
23144448699
-
GoPubMed: exploring PubMed with the gene ontology
-
doi:10.1093/nar/gki470, (Web Server issue): W783-6.
-
Doms A, Schroeder M. GoPubMed: exploring PubMed with the gene ontology. Nucleic Acids Res 2005;33(Web Server issue): W783-6. doi:10.1093/nar/gki470.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Doms, A.1
Schroeder, M.2
-
14
-
-
63549130264
-
MiSearch adaptive PubMed search tool
-
States D.J., Ade A.S., Wright Z.C., Bookvich A.V., Athey B.D. MiSearch adaptive PubMed search tool. Bioinformatics 2009, 25(7):974-976.
-
(2009)
Bioinformatics
, vol.25
, Issue.7
, pp. 974-976
-
-
States, D.J.1
Ade, A.S.2
Wright, Z.C.3
Bookvich, A.V.4
Athey, B.D.5
-
15
-
-
40549145521
-
MScanner: a classifier for retrieving Medline citations
-
Poulter G.L., Rubin D.L., Altman R.B., Seoighe C. MScanner: a classifier for retrieving Medline citations. BMC Bioinform 2008, 9(1):108.
-
(2008)
BMC Bioinform
, vol.9
, Issue.1
, pp. 108
-
-
Poulter, G.L.1
Rubin, D.L.2
Altman, R.B.3
Seoighe, C.4
-
16
-
-
14844329372
-
Ranking the whole MEDLINE database according to a large training set using text indexing
-
Suomela B.P., Andrade M.A. Ranking the whole MEDLINE database according to a large training set using text indexing. BMC Bioinform 2005, 6(1):75.
-
(2005)
BMC Bioinform
, vol.6
, Issue.1
, pp. 75
-
-
Suomela, B.P.1
Andrade, M.A.2
-
17
-
-
67650742243
-
Enhancing MEDLINE document clustering by incorporating MeSH semantic similarity
-
Zhu S., Zeng J., Mamitsuka H. Enhancing MEDLINE document clustering by incorporating MeSH semantic similarity. Bioinformatics 2009, 25(15):1944-1951.
-
(2009)
Bioinformatics
, vol.25
, Issue.15
, pp. 1944-1951
-
-
Zhu, S.1
Zeng, J.2
Mamitsuka, H.3
-
18
-
-
84855935076
-
Clustering MeSH representations of biomedical literature
-
HLT-NAACL 2004 Workshop, BioLINK
-
Struble C, Dharmanolla C. Clustering MeSH representations of biomedical literature. HLT-NAACL 2004 Workshop, BioLINK; 2004.
-
(2004)
-
-
Struble, C.1
Dharmanolla, C.2
-
19
-
-
37849024158
-
Non-linear correlation of content and metadata information extracted from biomedical article datasets
-
Theodosiou T., Angelis L., Vakali A. Non-linear correlation of content and metadata information extracted from biomedical article datasets. J Biomed Inform 2007, 41:202-216.
-
(2007)
J Biomed Inform
, vol.41
, pp. 202-216
-
-
Theodosiou, T.1
Angelis, L.2
Vakali, A.3
-
20
-
-
0024833794
-
Automated bibliographic retrieval based on current topics in hepatology: hepatopix
-
Powsner M.S., Riely C.A., Barwick K.W., Morrow J.S., Miller P.L. Automated bibliographic retrieval based on current topics in hepatology: hepatopix. Comput Biomed Res 1989, 22(6):552-564.
-
(1989)
Comput Biomed Res
, vol.22
, Issue.6
, pp. 552-564
-
-
Powsner, M.S.1
Riely, C.A.2
Barwick, K.W.3
Morrow, J.S.4
Miller, P.L.5
-
21
-
-
0027327094
-
Automatic knowledge acquisition from MEDLINE
-
Cimino J.J., Barnett G.O. Automatic knowledge acquisition from MEDLINE. Methods Inform Med 1993, 32(2):120-130.
-
(1993)
Methods Inform Med
, vol.32
, Issue.2
, pp. 120-130
-
-
Cimino, J.J.1
Barnett, G.O.2
-
22
-
-
0035755177
-
MeSHmap: a text mining tool for MEDLINE
-
Srinivasan P. MeSHmap: a text mining tool for MEDLINE. In: Proc AMIA Symp; 2001. p. 642-6.
-
(2001)
Proc AMIA Symp
, pp. 642-6
-
-
Srinivasan, P.1
-
23
-
-
61749095126
-
Arrowsmith two-node search interface: a tutorial on finding meaningful links between two disparate sets of articles in MEDLINE
-
Smalheiser N.R., Torvik V.I., Zhou W. Arrowsmith two-node search interface: a tutorial on finding meaningful links between two disparate sets of articles in MEDLINE. Comput Methods Programs Biomed 2009, 94(2):190-197.
-
(2009)
Comput Methods Programs Biomed
, vol.94
, Issue.2
, pp. 190-197
-
-
Smalheiser, N.R.1
Torvik, V.I.2
Zhou, W.3
-
24
-
-
33846523515
-
Relemed: sentence-level search engine with relevance score for the MEDLINE database of biomedical articles
-
Siadaty M.S., Shu J., Knaus W.A. Relemed: sentence-level search engine with relevance score for the MEDLINE database of biomedical articles. BMC Med Inform Decis Making 2007, 7(1):1.
-
(2007)
BMC Med Inform Decis Making
, vol.7
, Issue.1
, pp. 1
-
-
Siadaty, M.S.1
Shu, J.2
Knaus, W.A.3
-
25
-
-
54949111758
-
FACTA: a text search engine for finding associated biomedical concepts
-
Tsuruoka Y., Tsujii J., Ananiadou S. FACTA: a text search engine for finding associated biomedical concepts. Bioinformatics 2008, 24(21):2559-2560. 10.1093/bioinformatics/btn466.
-
(2008)
Bioinformatics
, vol.24
, Issue.21
, pp. 2559-2560
-
-
Tsuruoka, Y.1
Tsujii, J.2
Ananiadou, S.3
-
26
-
-
78651319979
-
The UniProt Consortium. Ongoing and future developments at the Universal Protein Resource
-
The UniProt Consortium. Ongoing and future developments at the Universal Protein Resource. Nucleic Acids Res 2011;39:D214-9.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
-
27
-
-
75549090213
-
KEGG for representation and analysis of molecular networks involving diseases and drugs
-
Kanehisa M., Goto S., Furumichi M., Tanabe M., Hirakawa M. KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Res 2010, 38:D355-D360.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Kanehisa, M.1
Goto, S.2
Furumichi, M.3
Tanabe, M.4
Hirakawa, M.5
-
28
-
-
84855954507
-
EpiphaNet: an interactive tool to support biomedical discoveries
-
Cohen T., Whitfield G.K., Schvaneveldt R.W., Mukund K., Rindflesch T. EpiphaNet: an interactive tool to support biomedical discoveries. J Biomed Discov Collab 2010, 21(5):21-49.
-
(2010)
J Biomed Discov Collab
, vol.21
, Issue.5
, pp. 21-49
-
-
Cohen, T.1
Whitfield, G.K.2
Schvaneveldt, R.W.3
Mukund, K.4
Rindflesch, T.5
-
29
-
-
35348880974
-
A large-scale evaluation and analysis of personalized search strategies
-
In: WWW '07: Proceedings of the 16th international conference on World Wide Web
-
Zhicheng D, Ruihua S, Ji-Rong W. A large-scale evaluation and analysis of personalized search strategies. In: WWW '07: Proceedings of the 16th international conference on World Wide Web; 2007. p. 581-90.
-
(2007)
, pp. 581-90
-
-
Zhicheng, D.1
Ruihua, S.2
Ji-Rong, W.3
-
31
-
-
0035747335
-
Model-based feedback in the KL-divergence retrieval model
-
In: Proceedings of the 10th international conference on information and knowledge management (CIKM 2001)
-
Zhai C, Lafferty J. Model-based feedback in the KL-divergence retrieval model. In: Proceedings of the 10th international conference on information and knowledge management (CIKM 2001); 2001. p. 403-10.
-
(2001)
, pp. 403-10
-
-
Zhai, C.1
Lafferty, J.2
-
32
-
-
85146676791
-
Verb semantics and lexical selection
-
In: Proceedings of the 32nd annual meeting of the associations for computational linguistics (ACL'94), Las Cruces, New Mexico
-
Wu Z, Palmer M. Verb semantics and lexical selection. In: Proceedings of the 32nd annual meeting of the associations for computational linguistics (ACL'94), Las Cruces, New Mexico; 1994. p. 133-8.
-
(1994)
, pp. 133-8
-
-
Wu, Z.1
Palmer, M.2
-
33
-
-
77957926706
-
Toward the development of innovative bifunctional agents to induce differentiation and to promote apoptosis in leukemia: clinical candidates and perspectives
-
Vizirianakis I.S., Chatzopoulou M., Bonovolias I.D., Nicolaou I., Demopoulos V.J., Tsiftsoglou A.S. Toward the development of innovative bifunctional agents to induce differentiation and to promote apoptosis in leukemia: clinical candidates and perspectives. J Med Chem 2010, 53(19):6779-6810.
-
(2010)
J Med Chem
, vol.53
, Issue.19
, pp. 6779-6810
-
-
Vizirianakis, I.S.1
Chatzopoulou, M.2
Bonovolias, I.D.3
Nicolaou, I.4
Demopoulos, V.J.5
Tsiftsoglou, A.S.6
-
34
-
-
0036635291
-
Clivec (STI-571, imatinib), a rationally developed, targeted anticancer drug
-
Capdeville R., Buchdunger E., Zimmermann J., Matter A. Clivec (STI-571, imatinib), a rationally developed, targeted anticancer drug. Nat Rev Drug Discov 2002, 1:493-502.
-
(2002)
Nat Rev Drug Discov
, vol.1
, pp. 493-502
-
-
Capdeville, R.1
Buchdunger, E.2
Zimmermann, J.3
Matter, A.4
-
35
-
-
33745955860
-
Impact of genetic diagnostics on drug development strategy
-
Million R.P. Impact of genetic diagnostics on drug development strategy. Nat Rev Drug Discov 2006, 5:459-462.
-
(2006)
Nat Rev Drug Discov
, vol.5
, pp. 459-462
-
-
Million, R.P.1
-
36
-
-
2342629325
-
Imatinib (STI571) resistance in chronic myelogenous leukemia: molecular basis of the underlying mechanisms and potential strategies for treatment
-
Cowan-Jacob S.W., Guez V., Fendrich G., Griffin G.D., Fabbro D., et al. Imatinib (STI571) resistance in chronic myelogenous leukemia: molecular basis of the underlying mechanisms and potential strategies for treatment. Mini Rev Med Chem 2004, 4:285-299.
-
(2004)
Mini Rev Med Chem
, vol.4
, pp. 285-299
-
-
Cowan-Jacob, S.W.1
Guez, V.2
Fendrich, G.3
Griffin, G.D.4
Fabbro, D.5
-
37
-
-
33749166205
-
How to write a patient case report
-
Cohen H. How to write a patient case report. Am J Health-Syst Pharm 2006, 63:1888-1892.
-
(2006)
Am J Health-Syst Pharm
, vol.63
, pp. 1888-1892
-
-
Cohen, H.1
-
38
-
-
27744590464
-
Case reports and case series from Lancet had significant impact on medical literature
-
Albrechz J., Meves A., Bigby M. Case reports and case series from Lancet had significant impact on medical literature. J Clin Epidemiol 2005, 58:1227-1232.
-
(2005)
J Clin Epidemiol
, vol.58
, pp. 1227-1232
-
-
Albrechz, J.1
Meves, A.2
Bigby, M.3
-
39
-
-
59949103230
-
Identification of a MYO18A-PDGFRB fusion gene in an eosinophilia-associated atypical myeloproliferative neoplasm with a t(5;17)(q33-34;q11.2)
-
Walz C., Haferlach C., Hänel A., Metzgeroth G., Erben P., et al. Identification of a MYO18A-PDGFRB fusion gene in an eosinophilia-associated atypical myeloproliferative neoplasm with a t(5;17)(q33-34;q11.2). Genes Chromosomes Cancer 2009, 48:179-183.
-
(2009)
Genes Chromosomes Cancer
, vol.48
, pp. 179-183
-
-
Walz, C.1
Haferlach, C.2
Hänel, A.3
Metzgeroth, G.4
Erben, P.5
-
40
-
-
34250007662
-
Two novel imatinib-responsive PDGFRA fusion genes in chronic eosinophilic leukaemia
-
Curtis C.E., Grand F.H., Musto P., Clark A., Murphy J., et al. Two novel imatinib-responsive PDGFRA fusion genes in chronic eosinophilic leukaemia. Brit J Haematol 2007, 138:77-81.
-
(2007)
Brit J Haematol
, vol.138
, pp. 77-81
-
-
Curtis, C.E.1
Grand, F.H.2
Musto, P.3
Clark, A.4
Murphy, J.5
-
41
-
-
0035106689
-
The two PDGF receptors maintain conserved signaling in vivo despite divergent embryological functions
-
Klinghoffer R.A., Mueting-Nelsen P.F., Faerman A., Shani M., Soriano P. The two PDGF receptors maintain conserved signaling in vivo despite divergent embryological functions. Mol Cell 2001, 7:343-354.
-
(2001)
Mol Cell
, vol.7
, pp. 343-354
-
-
Klinghoffer, R.A.1
Mueting-Nelsen, P.F.2
Faerman, A.3
Shani, M.4
Soriano, P.5
-
42
-
-
34047227818
-
GCP-mediated growth inhibition and apoptosis of prostate cancer cells via androgen receptor-dependent and -independent mechanisms
-
Tepper C.G., Vinall R.L., Wee C.B., Xue L., Shi X.B., Burich R., et al. GCP-mediated growth inhibition and apoptosis of prostate cancer cells via androgen receptor-dependent and -independent mechanisms. Prostate 2007, 67(5):521-535.
-
(2007)
Prostate
, vol.67
, Issue.5
, pp. 521-535
-
-
Tepper, C.G.1
Vinall, R.L.2
Wee, C.B.3
Xue, L.4
Shi, X.B.5
Burich, R.6
-
44
-
-
0344255770
-
Mechanisms involved in the induced differentiation of leukemia cells
-
Tsiftsoglou A.S., Pappas I.S., Vizirianakis I.S. Mechanisms involved in the induced differentiation of leukemia cells. Pharmacol Ther 2003, 100:257-290.
-
(2003)
Pharmacol Ther
, vol.100
, pp. 257-290
-
-
Tsiftsoglou, A.S.1
Pappas, I.S.2
Vizirianakis, I.S.3
-
45
-
-
70350734315
-
Erythropoiesis: model systems, molecular regulators, and developmental programs
-
Tsiftsoglou A.S., Vizirianakis I.S., Strouboulis J. Erythropoiesis: model systems, molecular regulators, and developmental programs. IUBMB Life 2009, 61:800-830.
-
(2009)
IUBMB Life
, vol.61
, pp. 800-830
-
-
Tsiftsoglou, A.S.1
Vizirianakis, I.S.2
Strouboulis, J.3
-
46
-
-
65649096154
-
MeSH Up: effective MeSH text classification for improved document retrieval
-
Trieschnigg D., Pezik P., Lee V., de Jong Franciska, Kraaij W., et al. MeSH Up: effective MeSH text classification for improved document retrieval. Bioinformatics 2009, 25(11):1412-1418. 10.1093/bioinformatics/btp249.
-
(2009)
Bioinformatics
, vol.25
, Issue.11
, pp. 1412-1418
-
-
Trieschnigg, D.1
Pezik, P.2
Lee, V.3
de Jong, F.4
Kraaij, W.5
-
47
-
-
50549101908
-
PuReD-MCL: a graph-based PubMed document clustering methodology
-
Theodosiou T., Darzentas N., Angelis L., Ouzounis C.A. PuReD-MCL: a graph-based PubMed document clustering methodology. Bioinformatics 2008, 24(17):1935-1941.
-
(2008)
Bioinformatics
, vol.24
, Issue.17
, pp. 1935-1941
-
-
Theodosiou, T.1
Darzentas, N.2
Angelis, L.3
Ouzounis, C.A.4
|