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Volumn 86, Issue 1, 2012, Pages 605-609

Conditional CD8 + T cell escape during acute simian immunodeficiency virus infection

Author keywords

[No Author keywords available]

Indexed keywords

EPITOPE; GAG PROTEIN; NEF PROTEIN; REV PROTEIN; RM9 PROTEIN; SP10 PROTEIN; UNCLASSIFIED DRUG; VIRUS PROTEIN;

EID: 84855953530     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.05511-11     Document Type: Article
Times cited : (29)

References (29)
  • 1
    • 0033799339 scopus 로고    scopus 로고
    • Putative immunodominant human immunodeciency virus-specic CD8(+) T-cell responses cannot be predicted by major histocompatibility complex class I haplotype
    • Betts MR, et al. 2000. Putative immunodominant human immunodeciency virus-specic CD8(+) T-cell responses cannot be predicted by major histocompatibility complex class I haplotype. J. Virol. 74:9144-9151.
    • (2000) J. Virol. , vol.74 , pp. 9144-9151
    • Betts, M.R.1
  • 2
    • 67749093395 scopus 로고    scopus 로고
    • Ultradeep pyrosequencing detects complex patterns of CD8+ T-lymphocyte escape in simian immunodeciency virus-infected macaques
    • Bimber BN, et al. 2009. Ultradeep pyrosequencing detects complex patterns of CD8+ T-lymphocyte escape in simian immunodeciency virus-infected macaques. J. Virol. 83:8247-8253.
    • (2009) J. Virol. , vol.83 , pp. 8247-8253
    • Bimber, B.N.1
  • 3
    • 78049524598 scopus 로고    scopus 로고
    • Whole-genome characterization of human and simian immunodeciency virus intrahost diversity by ultradeep pyrosequencing
    • Bimber BN, et al. 2010. Whole-genome characterization of human and simian immunodeciency virus intrahost diversity by ultradeep pyrosequencing. J. Virol. 84:12087-12092.
    • (2010) J. Virol. , vol.84 , pp. 12087-12092
    • Bimber, B.N.1
  • 4
    • 77954489376 scopus 로고    scopus 로고
    • Manipulation of FASTQ data with Galaxy
    • Blankenberg D, et al. 2010. Manipulation of FASTQ data with Galaxy. Bioinformatics 26:1783-1785.
    • (2010) Bioinformatics , vol.26 , pp. 1783-1785
    • Blankenberg, D.1
  • 5
    • 75949108066 scopus 로고    scopus 로고
    • Galaxy: a web-based genome analysis tool for experimentalists
    • Chapter 19:Unit 19.10.1-21
    • Blankenberg D, et al. 2010. Galaxy: a web-based genome analysis tool for experimentalists. Curr. Protoc. Mol. Biol. Chapter 19:Unit 19.10.1-21.
    • (2010) Curr. Protoc. Mol. Biol. , pp. 1-21
    • Blankenberg, D.1
  • 7
    • 50949117244 scopus 로고    scopus 로고
    • Marked epitope- and allele-specic differences in rates of mutation in human immunodeciency type 1 (HIV-1) Gag, Pol, and Nef cytotoxic T-lymphocyte epitopes in acute/early HIV-1 infection
    • Brumme ZL, et al. 2008. Marked epitope- and allele-specic differences in rates of mutation in human immunodeciency type 1 (HIV-1) Gag, Pol, and Nef cytotoxic T-lymphocyte epitopes in acute/early HIV-1 infection. J. Virol. 82:9216-9227.
    • (2008) J. Virol. , vol.82 , pp. 9216-9227
    • Brumme, Z.L.1
  • 8
    • 79952593008 scopus 로고    scopus 로고
    • Transcriptionally abundant major histocompat-ibility complex class I alleles are fundamental to nonhuman primate sim-ian immunodeciency virus-specic CD8+ T cell responses
    • Budde ML, et al. 2011. Transcriptionally abundant major histocompat-ibility complex class I alleles are fundamental to nonhuman primate sim-ian immunodeciency virus-specic CD8+ T cell responses. J. Virol. 85: 3250-3261.
    • (2011) J. Virol. , vol.85 , pp. 3250-3261
    • Budde, M.L.1
  • 9
    • 78649330712 scopus 로고    scopus 로고
    • Characterization of Mauritian cynomolgus macaque major histocompatibility complex class I haplotypes by highresolution pyrosequencing
    • Budde ML, et al. 2010. Characterization of Mauritian cynomolgus macaque major histocompatibility complex class I haplotypes by highresolution pyrosequencing. Immunogenetics 62:773-780.
    • (2010) Immunogenetics , vol.62 , pp. 773-780
    • Budde, M.L.1
  • 10
    • 66149112450 scopus 로고    scopus 로고
    • Mauritian cynomolgus macaques share two exceptionally common major histocompatibility complex class I alleles that restrict simian immunodeciency virus-specic CD8+ T cells
    • Burwitz BJ, et al. 2009. Mauritian cynomolgus macaques share two exceptionally common major histocompatibility complex class I alleles that restrict simian immunodeciency virus-specic CD8+ T cells. J. Virol. 83:6011-6019.
    • (2009) J. Virol. , vol.83 , pp. 6011-6019
    • Burwitz, B.J.1
  • 11
    • 79952819924 scopus 로고    scopus 로고
    • Epitope-specic CD8+ T lymphocytes crossrecognize mutant simian immunodeciency virus (SIV) sequences but fail to contain very early evolution and eventual xation of epitope escape mutations during SIV infection
    • Cale EM, et al. 2011. Epitope-specic CD8+ T lymphocytes crossrecognize mutant simian immunodeciency virus (SIV) sequences but fail to contain very early evolution and eventual xation of epitope escape mutations during SIV infection. J. Virol. 85:3746-3757.
    • (2011) J. Virol. , vol.85 , pp. 3746-3757
    • Cale, E.M.1
  • 12
    • 84855934421 scopus 로고    scopus 로고
    • Visualizing virus population variability from next generation sequencing data
    • IEEE, New York, NY
    • Correll M, Ghosh S, O'Connor D, Gleicher M. 2011. Visualizing virus population variability from next generation sequencing data. In Proceedings of BioVis 2011. IEEE, New York, NY.
    • (2011) Proceedings of BioVis 2011
    • Correll, M.1    Ghosh, S.2    O'Connor, D.3    Gleicher, M.4
  • 13
    • 0034984145 scopus 로고    scopus 로고
    • Relative dominance of epitope-specic cytotoxic T-lymphocyte responses in human immunodeciency virus type 1-infected persons with shared HLA alleles
    • Day CL, et al. 2001. Relative dominance of epitope-specic cytotoxic T-lymphocyte responses in human immunodeciency virus type 1-infected persons with shared HLA alleles. J. Virol. 75:6279-6291.
    • (2001) J. Virol. , vol.75 , pp. 6279-6291
    • Day, C.L.1
  • 14
    • 77955801615 scopus 로고    scopus 로고
    • Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
    • Goecks J, Nekrutenko A, Taylor J. 2010. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol. 11:R86.
    • (2010) Genome Biol , vol.11
    • Goecks, J.1    Nekrutenko, A.2    Taylor, J.3
  • 15
    • 3543078012 scopus 로고    scopus 로고
    • HIV and SIV CTL escape: implications for vaccine design
    • Goulder PJ,Watkins DI. 2004.HIV and SIV CTL escape: implications for vaccine design. Nat. Rev. Immunol. 4:630-640.
    • (2004) Nat. Rev. Immunol. , vol.4 , pp. 630-640
    • Goulder, P.1    Watkins, D.I.2
  • 16
    • 48749103238 scopus 로고    scopus 로고
    • Impact of MHC class I diversity on immune control of immunodeciency virus replication
    • Goulder PJ, Watkins DI. 2008. Impact of MHC class I diversity on immune control of immunodeciency virus replication.Nat. Rev. Immunol. 8:619-630.
    • (2008) Nat. Rev. Immunol. , vol.8 , pp. 619-630
    • Goulder, P.J.1    Watkins, D.I.2
  • 17
    • 77949380244 scopus 로고    scopus 로고
    • Extralymphoid CD8+ T cells resident in tissue from simian immunodeciency virus SIVmac239{Delta}nef-vaccinated macaques suppress SIVmac239 replication ex vivo
    • Greene JM, et al. 2010. Extralymphoid CD8+ T cells resident in tissue from simian immunodeciency virus SIVmac239{Delta}nef-vaccinated macaques suppress SIVmac239 replication ex vivo. J.Virol. 84:3362-3372.
    • (2010) J. Virol. , vol.84 , pp. 3362-3372
    • Greene, J.M.1
  • 18
    • 0036226603 scopus 로고    scopus 로고
    • BLAT-the BLAST-like alignment tool
    • Kent WJ. 2002. BLAT-the BLAST-like alignment tool. Genome Res. 12:656-664.
    • (2002) Genome Res , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 19
    • 14644415425 scopus 로고    scopus 로고
    • Immunodominance of HIV-1-specic CD8(+) T-cell responses in acute HIV-1 infection: at the crossroads of viral and host genetics
    • LichterfeldM, Yu XG, Le Gall S, AltfeldM. 2005. Immunodominance of HIV-1-specic CD8(+) T-cell responses in acute HIV-1 infection: at the crossroads of viral and host genetics. Trends Immunol. 26:166-171.
    • (2005) Trends Immunol , vol.26 , pp. 166-171
    • Lichterfeld, M.1    Yu, X.G.2    Le Gall, S.3    Altfeld, M.4
  • 20
    • 38849150398 scopus 로고    scopus 로고
    • Patterns of CD8+ immunodominance may inuence the ability of Mamu-B*08-positive macaques to naturally control simian immunodeciency virus SIVmac239 replication
    • Loffredo JT, et al. 2008. Patterns of CD8+ immunodominance may inuence the ability of Mamu-B*08-positive macaques to naturally control simian immunodeciency virus SIVmac239 replication. J. Virol. 82: 1723-1738.
    • (2008) J. Virol. , vol.82 , pp. 1723-1738
    • Loffredo, J.T.1
  • 21
    • 29644433171 scopus 로고    scopus 로고
    • Immunodomination in the evolution of dominant epitope-specic CD8+ T lymphocyte responses in simian immunodeciency virus-infected rhesus monkeys
    • Newberg MH, et al. 2006. Immunodomination in the evolution of dominant epitope-specic CD8+ T lymphocyte responses in simian immunodeciency virus-infected rhesus monkeys. J. Immunol. 176:319-328.
    • (2006) J. Immunol. , vol.176 , pp. 319-328
    • Newberg, M.H.1
  • 22
    • 0036113306 scopus 로고    scopus 로고
    • Acute phase cytotoxic T lymphocyte escape is a hallmark of simian immunodeciency virus infection
    • O'Connor DH, et al. 2002. Acute phase cytotoxic T lymphocyte escape is a hallmark of simian immunodeciency virus infection. Nat. Med. 8:493-499.
    • (2002) Nat. Med. , vol.8 , pp. 493-499
    • O'Connor, D.H.1
  • 23
    • 34247575203 scopus 로고    scopus 로고
    • Comprehensive characterization of MHC class II haplotypes in Mauritian cynomolgus macaques
    • O'Connor SL, et al. 2007. Comprehensive characterization of MHC class II haplotypes in Mauritian cynomolgus macaques. Immunogenetics 59: 449-462.
    • (2007) Immunogenetics , vol.59 , pp. 449-462
    • O'Connor, S.L.1
  • 24
    • 77957584418 scopus 로고    scopus 로고
    • T cell immunity in acute HIV-1 infection
    • Streeck H, Nixon DF. 2010. T cell immunity in acute HIV-1 infection. J. Infect. Dis. 202(Suppl. 2):S302-S308.
    • (2010) J. Infect. Dis. , vol.202 , Issue.SUPPL. 2
    • Streeck, H.1    Nixon, D.F.2
  • 25
    • 37349100502 scopus 로고    scopus 로고
    • Recognition of escape variants in ELISPOT does not always predict CD8+ T-cell recognition of simian immunodeciency virus-infected cells expressing the same variant sequences
    • Valentine LE, et al. 2008. Recognition of escape variants in ELISPOT does not always predict CD8+ T-cell recognition of simian immunodeciency virus-infected cells expressing the same variant sequences. J. Virol. 82: 575-581.
    • (2008) J. Virol. , vol.82 , pp. 575-581
    • Valentine, L.E.1
  • 26
    • 79958030663 scopus 로고    scopus 로고
    • Viral CTL escape mutants are generated in lymph nodes and subsequently become xed in plasma and rectalmucosa during acute SIV infection of macaques
    • Vanderford TH, et al. 2011. Viral CTL escape mutants are generated in lymph nodes and subsequently become xed in plasma and rectalmucosa during acute SIV infection of macaques. PLoS Pathog. 7:e1002048.
    • (2011) PLoS Pathog , vol.7
    • Vanderford, T.H.1
  • 27
    • 2642704191 scopus 로고    scopus 로고
    • Relationship among immunodominance of single CD8+ T cell epitopes, virus load, and kinetics of primary antiviral CTL response
    • Weidt G, Utermohlen O, Heukeshoven J, Lehmann-Grube F, Deppert W. 1998. Relationship among immunodominance of single CD8+ T cell epitopes, virus load, and kinetics of primary antiviral CTL response. J. Immunol. 160:2923-2931.
    • (1998) J. Immunol. , vol.160 , pp. 2923-2931
    • Weidt, G.1    Utermohlen, O.2    Heukeshoven, J.3    Lehmann-Grube, F.4    Deppert, W.5
  • 28
    • 0037301559 scopus 로고    scopus 로고
    • Will we be able to 'spot' an effective HIV-1 vaccine?
    • Yang OO. 2003. Will we be able to 'spot' an effective HIV-1 vaccine? Trends Immunol. 24:67-72.
    • (2003) Trends Immunol , vol.24 , pp. 67-72
    • Yang, O.O.1
  • 29
    • 1342281656 scopus 로고    scopus 로고
    • CTL ontogeny and viral escape: implications for HIV-1 vaccine design
    • Yang OO. 2004. CTL ontogeny and viral escape: implications for HIV-1 vaccine design. Trends Immunol. 25:138-142.
    • (2004) Trends Immunol , vol.25 , pp. 138-142
    • Yang, O.O.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.