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Volumn 134, Issue , 2012, Pages 150-156

Development, characterization and use of microsatellite markers for germplasm analysis in date palm (Phoenix dactylifera L.)

Author keywords

Date palm germplasm; Genetic diversity; Phoenix dactylifera; SSR markers

Indexed keywords

ALLELE; BAYESIAN ANALYSIS; CLUSTER ANALYSIS; DEVELOPMENTAL BIOLOGY; FRUIT; GENETIC ANALYSIS; GENETIC DIFFERENTIATION; GENETIC MARKER; GEOGRAPHICAL REGION; GERMPLASM;

EID: 84855580892     PISSN: 03044238     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.scienta.2011.11.032     Document Type: Article
Times cited : (56)

References (46)
  • 1
    • 67949109554 scopus 로고    scopus 로고
    • Molecular phylogeny of Qatari date palm genotypes using simple sequence repeats markers
    • Ahmad T.A., Al-Qaradawi A.Y. Molecular phylogeny of Qatari date palm genotypes using simple sequence repeats markers. Biotechnology 2009, 8:126-131.
    • (2009) Biotechnology , vol.8 , pp. 126-131
    • Ahmad, T.A.1    Al-Qaradawi, A.Y.2
  • 2
    • 62949236618 scopus 로고    scopus 로고
    • Development and evaluation of microsatellite markers in Phoenix dactylifera L. and their transferability to other Phoenix species
    • Akkak A., Scariot V., Torello Marinoni D., Boccacci P., Beltramo C., Botta R. Development and evaluation of microsatellite markers in Phoenix dactylifera L. and their transferability to other Phoenix species. Biol. Plantarum 2009, 53:164-166.
    • (2009) Biol. Plantarum , vol.53 , pp. 164-166
    • Akkak, A.1    Scariot, V.2    Torello Marinoni, D.3    Boccacci, P.4    Beltramo, C.5    Botta, R.6
  • 3
    • 0242625843 scopus 로고    scopus 로고
    • Molecular phylogeny of date palm (Phoenix dactylifera L.) cultivars from Saudi Arabia by DNA fingerprinting
    • Al-Khalifah N.S., Askari E. Molecular phylogeny of date palm (Phoenix dactylifera L.) cultivars from Saudi Arabia by DNA fingerprinting. Theor. Appl. Genet. 2003, 107:1266-1270.
    • (2003) Theor. Appl. Genet. , vol.107 , pp. 1266-1270
    • Al-Khalifah, N.S.1    Askari, E.2
  • 4
    • 84855603159 scopus 로고    scopus 로고
    • Biodiversity of Date palm in the Sultanate of Oman
    • Al-Yahyai A., Al-Khanjari S. Biodiversity of Date palm in the Sultanate of Oman. Afr. J. Agric. Res. 2008, 3:389-395.
    • (2008) Afr. J. Agric. Res. , vol.3 , pp. 389-395
    • Al-Yahyai, A.1    Al-Khanjari, S.2
  • 5
    • 0031789454 scopus 로고    scopus 로고
    • A Monograph of Phoenix L. (Palmae: Coryphoideae)
    • Barrow S.C. A Monograph of Phoenix L. (Palmae: Coryphoideae). Kew Bull. 1998, 53:513-575.
    • (1998) Kew Bull. , vol.53 , pp. 513-575
    • Barrow, S.C.1
  • 7
    • 0036774764 scopus 로고    scopus 로고
    • Identification of date cultivars in California using AFLP markers
    • Cao B.R., Chao C.C.T. Identification of date cultivars in California using AFLP markers. HortScience 2002, 37:966-968.
    • (2002) HortScience , vol.37 , pp. 966-968
    • Cao, B.R.1    Chao, C.C.T.2
  • 8
    • 34447627340 scopus 로고    scopus 로고
    • The date palm (Phoenix dactylifera L.): overview of biology, uses and cultivation
    • Chao C.T., Krueger R.R. The date palm (Phoenix dactylifera L.): overview of biology, uses and cultivation. HortScience 2007, 42:1077-1082.
    • (2007) HortScience , vol.42 , pp. 1077-1082
    • Chao, C.T.1    Krueger, R.R.2
  • 9
    • 0028083473 scopus 로고
    • Date palm (Phoenix dactylifera L.) cultivar identification by RFLP and RAPD
    • Corniquel B., Mercier L. Date palm (Phoenix dactylifera L.) cultivar identification by RFLP and RAPD. Plant Sci. 1994, 101:163-172.
    • (1994) Plant Sci. , vol.101 , pp. 163-172
    • Corniquel, B.1    Mercier, L.2
  • 10
    • 0030818458 scopus 로고    scopus 로고
    • Identification of date palm (Phoenix dactylifera L.) cultivars by RFLP: partial characterization of a cDNA probe that contains a sequence encoding a zinc finger motif
    • Corniquel B., Mercier L. Identification of date palm (Phoenix dactylifera L.) cultivars by RFLP: partial characterization of a cDNA probe that contains a sequence encoding a zinc finger motif. Int. J. Plant Sci. 1997, 158:152-156.
    • (1997) Int. J. Plant Sci. , vol.158 , pp. 152-156
    • Corniquel, B.1    Mercier, L.2
  • 11
    • 0345826014 scopus 로고    scopus 로고
    • Identification of Phoenix dactylifera L. varieties based on Amplified Fragment Length Polymorphism (AFLP) markers
    • Diaz S., Pire C., Ferrer J., Bonete M.J. Identification of Phoenix dactylifera L. varieties based on Amplified Fragment Length Polymorphism (AFLP) markers. Cell. Mol. Biol. Lett. 2003, 8:891-899.
    • (2003) Cell. Mol. Biol. Lett. , vol.8 , pp. 891-899
    • Diaz, S.1    Pire, C.2    Ferrer, J.3    Bonete, M.J.4
  • 12
    • 27644530880 scopus 로고    scopus 로고
    • Genetic analysis of Egyptian date (Phoenix dactylifera L.) accessions using AFLP markers
    • El-Assar A.M., Krueger R.R., Devanad P.S., Chao C.T. Genetic analysis of Egyptian date (Phoenix dactylifera L.) accessions using AFLP markers. Genet. Resour. Crop Ev. 2005, 52:601-607.
    • (2005) Genet. Resour. Crop Ev. , vol.52 , pp. 601-607
    • El-Assar, A.M.1    Krueger, R.R.2    Devanad, P.S.3    Chao, C.T.4
  • 13
    • 0036813899 scopus 로고    scopus 로고
    • Phenotypic diversity of date-palm cultivars (Phoenix dactylifera L.) from Morocco
    • Elhoumaizi M.A., Saaidi M., Oihabi A., Cilas C. Phenotypic diversity of date-palm cultivars (Phoenix dactylifera L.) from Morocco. Genet. Resour. Crop Ev. 2002, 49:483-490.
    • (2002) Genet. Resour. Crop Ev. , vol.49 , pp. 483-490
    • Elhoumaizi, M.A.1    Saaidi, M.2    Oihabi, A.3    Cilas, C.4
  • 14
    • 50249089643 scopus 로고    scopus 로고
    • Microsatellite markers reveal high genetic diversity in date palm (Phoenix dactylifera L.) germplasm from Sudan
    • Elshibli S., Korpelainen H. Microsatellite markers reveal high genetic diversity in date palm (Phoenix dactylifera L.) germplasm from Sudan. Genetica 2008, 134:251-260.
    • (2008) Genetica , vol.134 , pp. 251-260
    • Elshibli, S.1    Korpelainen, H.2
  • 15
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin ver. 3.0: an integrated software package for population genetic data analysis
    • Excoffier L., Laval G., Schneider S. Arlequin ver. 3.0: an integrated software package for population genetic data analysis. Evol. Bioinform. Online 2005, 1:47-50.
    • (2005) Evol. Bioinform. Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 16
    • 0032873516 scopus 로고    scopus 로고
    • Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites
    • Hamilton M.B., Pincus E.L., Di-Fiore A., Fleischer R.C. Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites. Biotechniques 1999, 27:500-507.
    • (1999) Biotechniques , vol.27 , pp. 500-507
    • Hamilton, M.B.1    Pincus, E.L.2    Di-Fiore, A.3    Fleischer, R.C.4
  • 17
    • 0028247958 scopus 로고
    • Determination of relatedness and geographical movement of Pistacia vera (pistachio; Anacardiaceae) germplasm by RAPD analysis
    • Hormaza J.I., Dollo L., Polito V.S. Determination of relatedness and geographical movement of Pistacia vera (pistachio; Anacardiaceae) germplasm by RAPD analysis. Econ. Bot. 1994, 48:349-358.
    • (1994) Econ. Bot. , vol.48 , pp. 349-358
    • Hormaza, J.I.1    Dollo, L.2    Polito, V.S.3
  • 18
    • 60649085769 scopus 로고    scopus 로고
    • Analysis of genetic diversity among European and Asian fig varieties (Ficus carica L.) using ISSR, RAPD, and SSR markers
    • Ikegami H., Nogata H., Hirashima K., Awamura M., Nakahara T. Analysis of genetic diversity among European and Asian fig varieties (Ficus carica L.) using ISSR, RAPD, and SSR markers. Genet. Resour. Crop Ev. 2009, 56:201-209.
    • (2009) Genet. Resour. Crop Ev. , vol.56 , pp. 201-209
    • Ikegami, H.1    Nogata, H.2    Hirashima, K.3    Awamura, M.4    Nakahara, T.5
  • 19
    • 72749100480 scopus 로고    scopus 로고
    • DNA markers for variety identification in date palm (Phoenix dactylifera L.)
    • Johnson C., Cullis T.A., Cullis M.A., Cullis C.A. DNA markers for variety identification in date palm (Phoenix dactylifera L.). J. Hortic. Sci. Biotech. 2009, 84:591-594.
    • (2009) J. Hortic. Sci. Biotech. , vol.84 , pp. 591-594
    • Johnson, C.1    Cullis, T.A.2    Cullis, M.A.3    Cullis, C.A.4
  • 20
  • 21
    • 0027467434 scopus 로고
    • PCR-amplification and detection of the human DIS80 VNTR locus. Amplification conditions, population genetics and application in forensic analysis
    • Kloosterman A.D., Budowle B., Daselaar P. PCR-amplification and detection of the human DIS80 VNTR locus. Amplification conditions, population genetics and application in forensic analysis. Int. J. Legal Med. 1993, 105:257-264.
    • (1993) Int. J. Legal Med. , vol.105 , pp. 257-264
    • Kloosterman, A.D.1    Budowle, B.2    Daselaar, P.3
  • 22
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
    • Kumar S., Tamura K., Nei M. MEGA3: integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform. 2004, 5:150-163.
    • (2004) Brief Bioinform. , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 23
    • 18744382780 scopus 로고    scopus 로고
    • PowerMarker: an integrated analysis environment for genetic marker analysis
    • Liu K., Muse S.V. PowerMarker: an integrated analysis environment for genetic marker analysis. Bioinformatics 2005, 21:2128-2129.
    • (2005) Bioinformatics , vol.21 , pp. 2128-2129
    • Liu, K.1    Muse, S.V.2
  • 24
    • 0037008812 scopus 로고    scopus 로고
    • Diversity of leaf peroxidases in date palm (Phoenix dactylifera L.) as revealed in an example of marginal (seedling derived) palm groves
    • Majourhat K., Bendiab K., Medraoui L., Baaziz M. Diversity of leaf peroxidases in date palm (Phoenix dactylifera L.) as revealed in an example of marginal (seedling derived) palm groves. Sci. Hortic. 2002, 95:31-38.
    • (2002) Sci. Hortic. , vol.95 , pp. 31-38
    • Majourhat, K.1    Bendiab, K.2    Medraoui, L.3    Baaziz, M.4
  • 27
    • 0020965531 scopus 로고
    • Accuracy of estimated phylogenetic trees from molecular data
    • Nei M., Tajima F., Tateno Y. Accuracy of estimated phylogenetic trees from molecular data. J. Mol. Evol. 1983, 19:153-170.
    • (1983) J. Mol. Evol. , vol.19 , pp. 153-170
    • Nei, M.1    Tajima, F.2    Tateno, Y.3
  • 28
    • 1942485952 scopus 로고    scopus 로고
    • Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants
    • Nybom H. Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Mol. Ecol. 2004, 13:1143-1155.
    • (2004) Mol. Ecol. , vol.13 , pp. 1143-1155
    • Nybom, H.1
  • 30
    • 43649099481 scopus 로고    scopus 로고
    • Morphological variability of Mauritanian date-palm (Phoenix dactylifera L.) cultivars as revealed by vegetative traits
    • Ould Mohamed Salem A., Rhouma A., Zehdi S., Marrakchi M., Trifi M. Morphological variability of Mauritanian date-palm (Phoenix dactylifera L.) cultivars as revealed by vegetative traits. Acta Bot. Croat. 2008, 67:81-90.
    • (2008) Acta Bot. Croat. , vol.67 , pp. 81-90
    • Ould Mohamed Salem, A.1    Rhouma, A.2    Zehdi, S.3    Marrakchi, M.4    Trifi, M.5
  • 31
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard J.K., Stephens M., Donnelly P. Inference of population structure using multilocus genotype data. Genetics 2000, 155:945-959. http://pritch.bsd.uchicago.edu/structure.html.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 32
    • 13244282967 scopus 로고    scopus 로고
    • Global patterns of isolation by distance based on genetic and morphological data
    • Relethford J. Global patterns of isolation by distance based on genetic and morphological data. Hum. Biol. 2004, 76:499-513.
    • (2004) Hum. Biol. , vol.76 , pp. 499-513
    • Relethford, J.1
  • 33
    • 43649094399 scopus 로고    scopus 로고
    • Genetic diversity and phylogenic relationships in date-palms (Phoenix dactylifera L.) as assessed by random amplified microsatellite polymorphism markers (RAMPOs)
    • Rhouma S., Dakhlaoui-Dkhil S., Ould Mohamed Salem A., Zehdi-Azouzi S., Rhouma A., Marrakchi M., Trifi M. Genetic diversity and phylogenic relationships in date-palms (Phoenix dactylifera L.) as assessed by random amplified microsatellite polymorphism markers (RAMPOs). Sci. Hortic. 2008, 117:53-57.
    • (2008) Sci. Hortic. , vol.117 , pp. 53-57
    • Rhouma, S.1    Dakhlaoui-Dkhil, S.2    Ould Mohamed Salem, A.3    Zehdi-Azouzi, S.4    Rhouma, A.5    Marrakchi, M.6    Trifi, M.7
  • 34
    • 36849080837 scopus 로고    scopus 로고
    • GENEPOP'007: a complete re-implementation of the GENEPOP software for Windows and Linux
    • Rousset F. GENEPOP'007: a complete re-implementation of the GENEPOP software for Windows and Linux. Mol. Ecol. Resour. 2008, 8:103-106.
    • (2008) Mol. Ecol. Resour. , vol.8 , pp. 103-106
    • Rousset, F.1
  • 35
    • 0033990048 scopus 로고    scopus 로고
    • Primer 3 on the WWW for general users and for biologist programmers
    • Humana, New Jersey, S. Krawetz Misener (Ed.)
    • Rozen S., Skaletsky H.J. Primer 3 on the WWW for general users and for biologist programmers. Bioinformatics Methods and Protocols: Methods in Molecular Biology 2000, 365-386. Humana, New Jersey. 1st ed. S. Krawetz Misener (Ed.).
    • (2000) Bioinformatics Methods and Protocols: Methods in Molecular Biology , pp. 365-386
    • Rozen, S.1    Skaletsky, H.J.2
  • 36
    • 3242881052 scopus 로고    scopus 로고
    • Genetic polymorphism of plastid DNA in Tunisian date-palm germplasm (Phoenix dactylifera L.) detected with PCR-RFLP
    • Sakka H., Zehdi S., Ould Mohamed Salem A., Rhouma A., Marrakchi M., Trifi M. Genetic polymorphism of plastid DNA in Tunisian date-palm germplasm (Phoenix dactylifera L.) detected with PCR-RFLP. Genet. Resour. Crop Ev. 2004, 51:479-487.
    • (2004) Genet. Resour. Crop Ev. , vol.51 , pp. 479-487
    • Sakka, H.1    Zehdi, S.2    Ould Mohamed Salem, A.3    Rhouma, A.4    Marrakchi, M.5    Trifi, M.6
  • 37
    • 24944461817 scopus 로고    scopus 로고
    • Growth and development of date palm (Phoenix dactylifera L.) seedlings under drought and salinity stresses
    • Sane D., Kneyta M.O., Diouf D., Diouf D., Badiane F.A., Sagna M., Borgel A. Growth and development of date palm (Phoenix dactylifera L.) seedlings under drought and salinity stresses. Afr. J. Biotechnol. 2005, 4:968-972.
    • (2005) Afr. J. Biotechnol. , vol.4 , pp. 968-972
    • Sane, D.1    Kneyta, M.O.2    Diouf, D.3    Diouf, D.4    Badiane, F.A.5    Sagna, M.6    Borgel, A.7
  • 38
    • 0031717292 scopus 로고    scopus 로고
    • Identification and genetic diversity analysis of date palm (Phoenix dactylifera L.) varieties from morocco using RAPD markers
    • Sedra M.H., Lashermes P., Trouslot P., Combes M., Hamon S. Identification and genetic diversity analysis of date palm (Phoenix dactylifera L.) varieties from morocco using RAPD markers. Euphytica 1998, 103:75-82.
    • (1998) Euphytica , vol.103 , pp. 75-82
    • Sedra, M.H.1    Lashermes, P.2    Trouslot, P.3    Combes, M.4    Hamon, S.5
  • 40
    • 62949148693 scopus 로고    scopus 로고
    • Spatial genetic structure and restricted gene flow in a functionally dioecious fig, Ficus pumila L. var. pumila (Moraceae)
    • Wang R., Ai B., Gao B.Q., Yu S., Li Y.Y., Chen X.Y. Spatial genetic structure and restricted gene flow in a functionally dioecious fig, Ficus pumila L. var. pumila (Moraceae). Popul. Ecol. 2009, 51:307-315.
    • (2009) Popul. Ecol. , vol.51 , pp. 307-315
    • Wang, R.1    Ai, B.2    Gao, B.Q.3    Yu, S.4    Li, Y.Y.5    Chen, X.Y.6
  • 41
    • 84872643499 scopus 로고
    • Isolation by distance under diverse systems of mating
    • Wright S. Isolation by distance under diverse systems of mating. Genetics 1946, 31:39-59.
    • (1946) Genetics , vol.31 , pp. 39-59
    • Wright, S.1
  • 42
    • 0000465952 scopus 로고
    • Date palm (Phoenix dactylifera L.)
    • Longman Press, UK, J. Smartt, N.W. Simmonds (Eds.)
    • Wrigley G. Date palm (Phoenix dactylifera L.). The Evolution of Crop Plants 1995, 399-403. Longman Press, UK. 2nd ed. J. Smartt, N.W. Simmonds (Eds.).
    • (1995) The Evolution of Crop Plants , pp. 399-403
    • Wrigley, G.1
  • 43
    • 0036288922 scopus 로고    scopus 로고
    • Cultivar identification and genetic fingerprinting of temperate fruit tree species using DNA markers
    • Wunsch A., Hormaza J.I. Cultivar identification and genetic fingerprinting of temperate fruit tree species using DNA markers. Euphytica 2002, 125:59-67.
    • (2002) Euphytica , vol.125 , pp. 59-67
    • Wunsch, A.1    Hormaza, J.I.2
  • 44
    • 31344450518 scopus 로고    scopus 로고
    • Diseases and pests of date palm
    • Plant Production and Protection, Food and Agriculture Organisation of the United Nations, Rome, A. Zaid (Ed.)
    • Zaid A., De Wet P.F., Djerbi M., Oihabi A. Diseases and pests of date palm. Date Palm Cultivation 2002, 227-242. Plant Production and Protection, Food and Agriculture Organisation of the United Nations, Rome. 1st ed. A. Zaid (Ed.).
    • (2002) Date Palm Cultivation , pp. 227-242
    • Zaid, A.1    De Wet, P.F.2    Djerbi, M.3    Oihabi, A.4
  • 46
    • 14944385177 scopus 로고    scopus 로고
    • Genetic diversity of Tunisian date palms (Phoenix dactylifera L.) revealed by nuclear microsatellite polymorphism
    • Zehdi S., Trifi M., Billotte N., Marrakchi M., Pintaud J.C. Genetic diversity of Tunisian date palms (Phoenix dactylifera L.) revealed by nuclear microsatellite polymorphism. Hereditas 2004, 141:278-287.
    • (2004) Hereditas , vol.141 , pp. 278-287
    • Zehdi, S.1    Trifi, M.2    Billotte, N.3    Marrakchi, M.4    Pintaud, J.C.5


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