Microsatellite markers reveal high genetic diversity in date palm (Phoenix dactylifera L.) germplasm from Sudan

Genetica

Volumn 134, Issue 2, 2008, Pages 251-260

  Elshibli, Sakina ^a   Korpelainen, Helena ^a  

^a UNIVERSITY OF HELSINKI   (Finland)

Author keywords

Date palm; Genetic diversity; Microsatellite markers; Phoenix dactylifera L.; Polymorphism

Indexed keywords

MICROSATELLITE DNA; PLANT DNA;

ARECACEAE; ARTICLE; GENETIC VARIABILITY; GENETICS; SUDAN; TREE;

ARECACEAE; DNA, PLANT; MICROSATELLITE REPEATS; SUDAN; TREES; VARIATION (GENETICS);

PHOENIX DACTYLIFERA;

EID: 50249089643     PISSN: 00166707     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10709-007-9232-8     Document Type: Article

References (55)

1. Adawy SS, Hussein EHA, Ismail SEME, El-Itriby HA (2006) Genomic diversity in date palm (Phoenix dactylifera L.) as revealed by AFLPs in comparison to RAPDs and ISSRs. In: Abstracts of 3rd international date palm conference, Abu Dhabi, United Arab Emirates, 19-21 February 2006
2. Ahmed MAR (2006) The efficacy of four systematic insecticides using two methods of application against the green date palm pit scale insect (Asterolecanium phoenicis Rao.) (Palmapsis phoenicis) (Homoptera: Asterolecaniidae) in northern Sudan. In: Abstracts of 3rd international date palm conference, Abu Dhabi, United Arab Emirates, 19-21 February 2006
3. Ahmed AIS, Siliman WS, El-Agib E (2001) Prospectives for date palm and dates research. Paper presented at a workshop on date palm culture and dates production in Republic of Sudan. Date Palm Research and Development Network, Khartoum, Sudan, 22-17 August 2001
4. NS Al-Khalifah E Askari 2003 Molecular phylogeny of date palm (Phoenix dactylifera L.) cultivars from Saudi Arabia by DNA fingerprinting Theor Appl Genet 107 1266 1270
5. AAM Al-Jibouri KM Adham 1990 Biochemical classification of date palm male cultivars J Hortic Sci 65 725 729
6. Al-maarri KW (1995) Date palm propagation through tissue culture techniques. Dabs-Dimishg, 256 pp
7. Al-Wasel ASAA (2005) Survey study on: somaclonal variations in in vitro-derived date palm trees. In: Proceeding of the international workshop on true-to-typeness of date palm tissue culture-derived plants, National Institute of Agronomic Research, Morocco, 23-25 May 2005, http://www.inra.org.ma/ist/ publications/ouvrages/truetype.pdf. Cited 15 January 2007
8. M Azeqour K Majourhat M Baaziz 2002 Morphological variations and isoenzyme polymorphism of date palm clones from in vitro culture acclimatized and established on soil in South Morocco Euphytica 123 57 66
9. M Baaziz 1988 The activity and preliminary characterisation of peroxidases in leaves of cultivars of date palm (Phoenix dactylifera L.) New Phytol 111 403 411
10. Baaziz M (2000) Date palm culture in the Maghreb countries: constraints and scientific research. Paper presented at the date palm international symposium, Namibia, 22-25 February 2000, pp 306-311
11. M Baaziz M Saaidi 1988 Preliminary identification of date palm cultivars by esterase isoenzymes and peroxidase activities Can J Bot 66 89 93
12. Baaziz M, Majourhat K, Bendiab K (2002) Date palm culture in the Magreb countries: constraints and scientific research. Paper presented at the date palm international symposium, Namibia, 22-25 February 2002
13. Baballa AM (2002) The characterisation of dry date palm in the River Nile State. MSc Thesis, University of Wadi Elneel, Sudan
14. Bashab FAA (1997) Investigations on pollination and fruit thining of Mishrig Wad Khateeb date palm cultivar in Sudan. MSc Thesis, University of Khartoum, Sudan
15. Beauchesne G (1982) Vegetative propagation of date palm (Phoenix dactylifera) by in vitro culture. Paper presented at the 1st symposium of date palm, King Faisal University, Al-Hassa, Saudi Arabia, 23-25 March 1982
16. Beacuchesne G, Zaid A, Rhiss A (1986) Meristematic potentialities of bottom of young leaves to rapidly propagate date palm. In: Proceeding of second symposium of date palm, King Faisal University, Al-Hassa, Saudi Arabia, 3-6 March 1986
17. Belkhir K, Borsa P, Chikhi L, Raufaste N, Bonhomme F (2004) GENETIX 4.05, logiciel sous WindowsTM pour la génétique des populations. Laboratoire Génome, Populations, Interactions CNRS UMR 5000, Université de Montpellier II, Montpellier, France. http://www.univ- montp2.fr/∼genetix/genetix/genetix.htm. Cited 21 September 2005
18. K Bendiab M Baaziz K Majourhat 1998 Preliminary date palm cultivar composition of Moroccan palm groves as revealed by leaf isoenzymes phenotypes Biochem Syst Ecol 26 71 82
19. Benkhalifa A (1999) Gestion de la diversité géné tique du palmier dattier en Algérie. Paper presented at the workshop constitution et organisation d'équipes de recherche scientifique dans les domaines de foresterie et des arbres fruitiers, Marrakech, Morocco, 13-15 April 1999
20. M Bennaceur C Lanaud MH Chevalier N Bounaga 1991 Genetic diversity of the date palm (Phoenix dactylifera L.) from Algeria revealed by enzyme markers Plant Breed 107 56 69
21. N Billotte N Marseilla P Brottier JL Noyer JP Jacquemoud-Collet C Moreau T Couvreur MH Chevallier JC Pintaud AM Risterucci 2004 Nuclear microsatellite markers for the date palm (Phoenix dactylifera L.): characterisation, utility across the genus Phoenix and in other palm genera Mol Ecol Notes 4 256 258
22. BR Cao CT Chao 2002 Identification of date cultivars in California using AFLP markers HortScience 37 966 968
23. Djerbi M (2000) Abnormal fruiting of the date palm derived from tissue culture. In: Proceeding of the date palm international symposium, Namibia, 22-25 February, 2000, 7 pp
24. N Drira A Benpadis 1985 Multiplication vegetative du palmier datteir par reversion en culture in vitro d ebaushes florales D. Noure Reds feells J Plant Physiol 119 227 235
25. Ebaid M (1996) Green scale insect. Paper presented at the 1st date palm and dates symposium, Dungulah, Sudan, 9-11 October 1996
26. Eck RV, Dayhoff MO (1966) Atlas of protein sequence and structure. National Biomedical Research Foundation, Silver Spring, Maryland, 215 pp
27. AM El-Assar RR Krueger PS Devanad CT Chao 2005 Genetic analysis of Egyptian date (Phoenix dactylifera L.) accessions using AFLP markers Genet Resour Crop Evol 52 601 607
28. Felsentein J (2004) PHYLIP (Phylogeny Interference Package, v. 3.6. http://www.evolution.genetics.washington.edu/phylip.html. Cited 17 March 2006
29. AG Kluge JS Farris 1969 Quantitative phyletics and the evolution of anurans Syst Zool 18 1 32
30. Langella O (2002) Populations 1.2. 28 software, http://www.pge.cnrs-gif. fr/bioinfo/populations. Cited 15 November 2005
31. CC Li DG Horwitz 1953 Some methods of estimating the inbreeding coefficient Am J Hum Genet 5 107 117
32. J Louvet G Toutain 1973 Recherches sur les fusarioses VIII. Nouvelles observations sur la fusariose du palmier dattier et precisions concernant la lutte Ann Phytopathol 4 35 52
33. K Majourhat K Bendiab L Medraoui M Baaziz 2002 Diversity of leaf peroxidases in date palm (Phoenix dactylifera L.) as revealed in an example of marginal (seedling derived) palm groves Sci Hortic 95 31 38
34. Mehdi AM (1996) Application of plant tissue culture in date palm propagation. Paper presented at the 1st date palm and dates symposium, Dungulah, Sudan, 9-11 October 1996
35. Mohamed AA (1996) Date palm culture and dates production in Northern State of Sudan. Paper presented at the 1st date palm and dates symposium, Dungulah, Sudan, 9-11 October 1996
36. Nixon RW (1950) Imported cultivars of dates in the United States. USDA circular no 834:144
37. Oihabi A (2000a) Date palm in North Africa and Near East: production and constrain. Paper presented at the date palm international symposium, Namibia, 22-25 February 2000
38. Oihabi A (2000b) Technical report: date palm genetic resources in North Africa. In: Proceeding of the date palm international symposium, Namibia, 22-25 February 2000, pp 333-335
39. Omer MS, Hameed MK, Al-Rawi MS (1992) Micropropagation of date palm (Phoenix dactylifera L.). In: Bajaj YPS (ed) Biotechnology in agriculture and forestry, vol. 18 high-tech and micropropagation II. Springer-Verlag, Berlin, pp 471-490
40. AMA Osman 1984 The performance of date palms in the Sudan Acta Hortic 143 231 237
41. Osman AMA (2001) Development of date palm culture in Republic of Sudan. Paper presented at a workshop on date palm culture and dates production in Republic of Sudan. Date Palm Research and Development Network, Khartoum, Sudan, 22-17 August 2001
42. M Saker S Bekheet H Taha A Fahmy H Moursy 2000 Detection of somaclonal variation in tissue culture-derived date palm plants using isozyme analysis and RAPD fingerprints Biol Plant 43 347 351
43. MM Saker SS Adawy AA Mohamed HA El-Itriby 2006 Monitoring of cultivar identity in tissue culture-derived date palms using RAPD and AFLP analysis Biol Plant 50 198 204
44. AOM Salem M Trifi H Sakka A Rhouma M Marrakchi 2001 Genetic inheritance analysis of four enzymes in date palm (Phoenix dactylifera L.) Genet Resour Crop Evol 48 361 368
45. MH Sedra P Lashermes P Trouslot M Combes S Hamon 1998 Identification and genetic diversity analysis of date palm (Phoenix dactylifera L.) varieties from morocco using RAPD markers Euphytica 103 75 82
46. Sidig AS (2001) Important insect pests of date palm in Sudan and methods of protection. Paper presented at a workshop on date palm culture and dates production in Republic of Sudan. Date Palm Research and Development Network, Khartoum, Sudan, 22-17 August 2001
47. SS Soliman BA Ali MMM Ahmed 2003 Genetic comparisons of Egyptian date palm cultivars (Phoenix dactylifera L.) by RAPD-PCR Afr J Biotechnol 2 86 87
48. B Tisserat 1979 Propagation of date palm (Phoenix dactylifera L.) in vitro J Exp Bot 30 1275 1283
49. M Trifi A Rhouma M Marrakchi 2000 Phylogenetic relationships in Tunisian date-palm (Phoenix dactylifera L.) germplasm collection using DNA amplification fingerprinting Agronomie 20 665 671
50. Wrigley G (1995) Date palm (Phoenix dactylifera L.). In: Smartt J, Simmonds NW (eds) The evolution of crop plants. Longman, UK, pp 399-403
51. Yousif AA (1995) The date palm, vol 1, 1st edn. Khartoum University Press, Khartoum, pp 273-280
52. Zaid A, de Wet PF (2002) Date palm propagation. In: Zaid A (ed) Date palm cultivation. FAO Plant Production and Protection Paper no. 156. Food and Agriculture Organisation of the United Nations, Rome, pp 73-105
53. S Zehdi M Trifi N Billotte M Marakchi JC Pintaud 2004 Genetic diversity of Tunisian date palms (Phoenix dactylifera L.) revealed by nuclear microsatellite polymorphism Hereditas 141 278 287
54. S Zehdi H Sakka A Rhouma AOM Salem M Marrakchi M Trifi 2004 Analysis of Tunisian date palm germplasm using simple sequence repeat primers Afr J Biotechnol 3 215 219
55. S Zehdi M Trifi AOM Salem 2002 Survey of inter simple sequence repeat polymorphisms in Tunisian date palms (Phoenix dactylifera L.) J Genet Breed 56 77 83