CATCHprofiles: Clustering and alignment tool for chip profiles

PLoS ONE

Volumn 7, Issue 1, 2012, Pages

  Nielsen, Fiona G G ^a,c   Markus, Kasper Galschiøt ^b   Friborg, Rune Møllegaard ^d   Favrholdt, Lene Monrad ^b   Stunnenberg, Hendrik G ^c   Huynen, Martijn ^a,c  

^a RADBOUD UNIVERSITY MEDICAL CENTER   (Netherlands)

^b UNIVERSITY OF SOUTHERN DENMARK   (Denmark)

^c RADBOUD UNIVERSITY MEDICAL CENTER   (Netherlands)

^d UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; HISTONE H2AZ; TRANSCRIPTION FACTOR CTCF;

AB INITIO CALCULATION; ALGORITHM; ARTICLE; CLUSTERING AND ALIGNMENT TOOL FOR CHROMATIN IMMUNOPRECIPITATION PROFILE; COMPUTER INTERFACE; CONTROLLED STUDY; GENETIC TRANSCRIPTION; HISTONE MODIFICATION; MATHEMATICAL ANALYSIS; PROTEIN DNA BINDING; BIOLOGICAL MODEL; BIOLOGY; CELL CULTURE; CHROMATIN IMMUNOPRECIPITATION; CLUSTER ANALYSIS; COMPUTER PROGRAM; EVALUATION; GENE EXPRESSION PROFILING; GENETICS; HUMAN; METHODOLOGY; MICROARRAY ANALYSIS; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PRODUCTIVITY; PROMOTER REGION; SEQUENCE ALIGNMENT; STATISTICAL ANALYSIS; STATISTICS;

ALGORITHMS; BASE SEQUENCE; CELLS, CULTURED; CHROMATIN IMMUNOPRECIPITATION; CLUSTER ANALYSIS; COMPUTATIONAL BIOLOGY; DATA INTERPRETATION, STATISTICAL; EFFICIENCY; GENE EXPRESSION PROFILING; HUMANS; MICROARRAY ANALYSIS; MODELS, BIOLOGICAL; MOLECULAR SEQUENCE DATA; PROMOTER REGIONS, GENETIC; SEQUENCE ALIGNMENT; SOFTWARE;

EID: 84855415240     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0028272     Document Type: Article

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