메뉴 건너뛰기




Volumn 31, Issue 1, 2012, Pages 1-15

Image processing assisted algorithms for optical projection tomography

Author keywords

Artifacts; axis of rotation (AR); biomedical image processing; islets of Langerhans; optical projection tomography (OPT); pancreas; postalignment

Indexed keywords

ARTIFACTS; AXIS OF ROTATION; BIOMEDICAL IMAGE PROCESSING; ISLETS OF LANGERHANS; OPTICAL PROJECTION TOMOGRAPHY; PANCREAS; POSTALIGNMENT;

EID: 84855396325     PISSN: 02780062     EISSN: None     Source Type: Journal    
DOI: 10.1109/TMI.2011.2161590     Document Type: Article
Times cited : (46)

References (29)
  • 1
    • 4444355803 scopus 로고    scopus 로고
    • Optical projection tomography
    • DOI 10.1146/annurev.bioeng.6.040803.140210
    • J. Sharpe, "Optical projection tomography," Annu. Rev. Biomed. Eng., vol. 6, pp. 209-228, Aug. 2004. (Pubitemid 39209497)
    • (2004) Annual Review of Biomedical Engineering , vol.6 , pp. 209-228
    • Sharpe, J.1
  • 2
    • 0037134008 scopus 로고    scopus 로고
    • Optical projection tomography as a tool for 3-Dmicroscopy and gene expression studies
    • Apr.
    • J. Sharpe, U. Ahlgren, P. Perry, B. Hill, A. Ross, J. Hecksher-Sørensen, R. Baldock, and D. Davidson, "Optical projection tomography as a tool for 3-Dmicroscopy and gene expression studies," Science, vol. 296, no. 5567, pp. 541-54519, Apr. 2002.
    • (2002) Science , vol.296 , Issue.5567 , pp. 541-54519
    • Sharpe, J.1    Ahlgren, U.2    Perry, P.3    Hill, B.4    Ross, A.5    Hecksher-Sørensen, J.6    Baldock, R.7    Davidson, D.8
  • 3
    • 24344488912 scopus 로고    scopus 로고
    • 3D modelling, gene expression mapping and post-mapping image analysis in the developing human brain
    • DOI 10.1016/j.brainresbull.2005.05.022, PII S0361923005001954, Evolution and Development of Nervous Systems Proceedings of the 4th European Conference on Comparative Neurobiology
    • S. Sarma, J. Kerwin, L. Puelles, M. Scott, T. Strachan, G. Feng, J. Sharpe, D. Davidson, R. Baldock, and S. Lindsay, "3-D modelling, gene expression mapping and post-mapping image analysis in the developing human brain," Brain Res. Bull., vol. 66, pp. 449-453, 2005. (Pubitemid 41247694)
    • (2005) Brain Research Bulletin , vol.66 , Issue.4-6 , pp. 449-453
    • Sarma, S.1    Kerwin, J.2    Puelles, L.3    Scott, M.4    Strachan, T.5    Feng, G.6    Sharpe, J.7    Davidson, D.8    Baldock, R.9    Lindsay, S.10
  • 6
  • 7
    • 16644398688 scopus 로고    scopus 로고
    • Optical projection tomography for spatio-temporal analysis in the zebrafish
    • R. J. Bryson-Richardson and P. D. Currie, "Optical projection tomography for spatio-temporal analysis in the zebrafish," Methods Cell Biol., vol. 76, pp. 37-50, 2004.
    • (2004) Methods Cell Biol. , vol.76 , pp. 37-50
    • Bryson-Richardson, R.J.1    Currie, P.D.2
  • 8
    • 33749251456 scopus 로고    scopus 로고
    • Visualizing plant development and gene expression in three dimensions using optical projection tomography
    • DOI 10.1105/tpc.106.043042
    • K. Lee, J. Avondo, H. Morrison, L. Blot, M. Stark, J. Sharpe, A. Bangham, and E. Coen, "Visualizing plant development and gene expression in three dimensions using optical projection tomography," Plant Cell, vol. 18, pp. 2145-2156, Aug. 2006. (Pubitemid 44484716)
    • (2006) Plant Cell , vol.18 , Issue.9 , pp. 2145-2156
    • Lee, K.1    Avondo, J.2    Morrison, H.3    Blot, L.4    Stark, M.5    Sharpe, J.6    Bangham, A.7    Coen, E.8
  • 9
    • 33845926261 scopus 로고    scopus 로고
    • Tomographic molecular imaging and 3D quantification within adult mouse organs
    • DOI 10.1038/nmeth985, PII NMETH985
    • T. Alanentalo, A. Asayesh, H. Morrison, C. E. Lorén, D. Holmberg, J. Sharpe, and U. Ahlgren, "Tomographic molecular imaging and 3-D quantification within adult mouse organs," Nature Methods, vol. 4, pp. 31-33, 2007. (Pubitemid 46029471)
    • (2007) Nature Methods , vol.4 , Issue.1 , pp. 31-33
    • Alanentalo, T.1    Asayesh, A.2    Morrison, H.3    Loren, C.E.4    Holmberg, D.5    Sharpe, J.6    Ahlgren, U.7
  • 10
    • 21244465509 scopus 로고    scopus 로고
    • Three-dimensional imaging of single isolated cell nuclei using optical projection tomography
    • DOI 10.1364/OPEX.13.004210
    • M. Fauver, E. Seibel, J. R. Rahn,M.Meyer, F. Patten, T.Neumann, and A. Nelson, "Three-dimensional imaging of single isolated cell nuclei using optical projection tomography," Opt. Express, vol. 13, no. 11, pp. 4210-23, 2005. (Pubitemid 40899320)
    • (2005) Optics Express , vol.13 , Issue.11 , pp. 4210-4223
    • Fauver, M.1    Seibel, E.J.2    Richard Rahn, J.3    Meyer, M.G.4    Patten, F.W.5    Neumann, T.6    Nelson, A.C.7
  • 11
    • 46249132804 scopus 로고    scopus 로고
    • In vitro whole-organ imaging: 4D quantification of growing mouse limb buds
    • DOI 10.1038/nmeth.1219, PII NMETH.1219
    • M. J. Boot, C. H. Westerberg, J. Sanz-Ezquerro, J. Cotterell, R. Schweitzer, M. Torres, and J. Sharpe, "In vitro whole-organ imaging: 4D quantification of growing mouse limb buds," Nature Methods, vol. 5, pp. 609-612, 2008. (Pubitemid 351911865)
    • (2008) Nature Methods , vol.5 , Issue.7 , pp. 609-612
    • Boot, M.J.1    Westerberg, C.H.2    Sanz-Ezquerro, J.3    Cotterell, J.4    Schweitzer, R.5    Torres, M.6    Sharpe, J.7
  • 12
    • 79960091945 scopus 로고    scopus 로고
    • An improved protocol for optical projection tomography imaging reveals lobular heterogeneities in pancreatic islet and-cell mass distribution
    • A. Hörnblad, A. Cheddad, and U. Ahlgren, "An improved protocol for optical projection tomography imaging reveals lobular heterogeneities in pancreatic islet and-cell mass distribution," Islets, vol. 3, no. 4, pp. 1-5, 2011.
    • (2011) Islets , vol.3 , Issue.4 , pp. 1-5
    • Hörnblad, A.1    Cheddad, A.2    Ahlgren, U.3
  • 13
    • 60849137241 scopus 로고    scopus 로고
    • High-resolution three-dimensional imaging of islet-infiltrate interactions based on optical projection tomography assessments of the intact adultmouse pancreas
    • T.Alanentalo, C. E. Lorén, A. Larefalk, J.Sharpe, D. Holmberg, andU. Ahlgren, "High-resolution three-dimensional imaging of islet-infiltrate interactions based on optical projection tomography assessments of the intact adultmouse pancreas," J. Biomed. Opt., vol. 13, no. 5, p. 054070, 2008.
    • (2008) J. Biomed. Opt. , vol.13 , Issue.5 , pp. 054070
    • Alanentalo, T.1    Lorén, C.E.2    Larefalk, A.3    Sharpe, J.4    Holmberg, D.5    Ahlgren, U.6
  • 14
    • 77954298756 scopus 로고    scopus 로고
    • Quantification and threedimensional imaging of the insulitis-induced destruction of beta-cells in murine type 1 diabetes
    • T. Alanentalo, A. Hörnblad, S. Mayans, A. K. Nilsson, J. Sharpe, A. Larefalk, U. Ahlgren, and D. Holmberg, "Quantification and threedimensional imaging of the insulitis-induced destruction of beta-cells in murine type 1 diabetes," Diabetes, vol. 59, no. 7, pp. 1756-64, 2010.
    • (2010) Diabetes , vol.59 , Issue.7 , pp. 1756-1764
    • Alanentalo, T.1    Hörnblad, A.2    Mayans, S.3    Nilsson, A.K.4    Sharpe, J.5    Larefalk, A.6    Ahlgren, U.7    Holmberg, D.8
  • 15
    • 55649108628 scopus 로고    scopus 로고
    • Imaging the pancreas: From ex vivo to non-invasive technology
    • D. Holmberg and U. Ahlgren, "Imaging the pancreas: From ex vivo to non-invasive technology," Diabetologia, vol. 51, no. 12, pp. 2148-54, 2008.
    • (2008) Diabetologia , vol.51 , Issue.12 , pp. 2148-2154
    • Holmberg, D.1    Ahlgren, U.2
  • 18
    • 79551515528 scopus 로고    scopus 로고
    • Improved reconstructions and generalized filtered back projection for optical projection tomography
    • U. J. Birk, A. Darrell, N. Konstantinides, A. Sarasa-Renedo, and J. Ripoll, "Improved reconstructions and generalized filtered back projection for optical projection tomography," Appl. Opt., vol. 50, no. 4, pp. 392-398, 2011.
    • (2011) Appl. Opt. , vol.50 , Issue.4 , pp. 392-398
    • Birk, U.J.1    Darrell, A.2    Konstantinides, N.3    Sarasa-Renedo, A.4    Ripoll, J.5
  • 20
    • 70349433638 scopus 로고    scopus 로고
    • Patterns, variants, artifacts, and pitfalls in conventional radionuclide bone imaging and SPECT/CT
    • Nov.
    • G. Gnanasegaran, G. Cook, K. Adamson, and I. Fogelman, "Patterns, variants, artifacts, and pitfalls in conventional radionuclide bone imaging and SPECT/CT," Seminars Nucl. Med., vol. 39, no. 6, pp. 380-395, Nov. 2009.
    • (2009) Seminars Nucl. Med. , vol.39 , Issue.6 , pp. 380-395
    • Gnanasegaran, G.1    Cook, G.2    Adamson, K.3    Fogelman, I.4
  • 22
    • 25444435184 scopus 로고    scopus 로고
    • Correction of artefacts in optical projection tomography
    • J. R.Walls, J. G. Sled, J. Sharpe, and R. M. Henkelman, "Correction of artefacts in optical projection tomography," Phys. Med. Biol., vol. 50, no. 19, p. 4645, 2005.
    • (2005) Phys. Med. Biol. , vol.50 , Issue.19 , pp. 4645
    • Walls, J.R.1    Sled, J.G.2    Sharpe, J.3    Henkelman, R.M.4
  • 23
    • 0022033601 scopus 로고
    • A comparison of different focus functions for use in autofocus algorithms
    • F. C. A. Groen, I. T.Young, andG. Ligthart, "A comparison of different focus functions for use in autofocus algorithms," Cytometry, vol. 6, no. 2, pp. 81-91, 1985.
    • (1985) Cytometry , vol.6 , Issue.2 , pp. 81-91
    • Groen, F.C.A.1    Young, I.T.2    Ligthart, G.3
  • 26
    • 34248178543 scopus 로고    scopus 로고
    • Resolution improvement in emission optical projection tomography
    • J. R. Walls, J. G. Sled, J. Sharpe, and R. M. Henkelman, "Resolution improvement in emission optical projection tomography," Phys. Med. Biol., vol. 52, no. 10, pp. 2775-2790, 2007.
    • (2007) Phys. Med. Biol. , vol.52 , Issue.10 , pp. 2775-2790
    • Walls, J.R.1    Sled, J.G.2    Sharpe, J.3    Henkelman, R.M.4
  • 27
    • 40149088424 scopus 로고    scopus 로고
    • Efficient subpixel image registration algorithms
    • DOI 10.1364/OL.33.000156
    • M. Guizar-Sicairos, S. T. Thurman, and J. R. Fienup, "Efficient subpixel image registration algorithms," Opt. Lett., vol. 33, no. 2, pp. 156-158, 2008. (Pubitemid 351328267)
    • (2008) Optics Letters , vol.33 , Issue.2 , pp. 156-158
    • Guizar-Sicairos, M.1    Thurman, S.T.2    Fienup, J.R.3
  • 29
    • 78149303646 scopus 로고    scopus 로고
    • Block matching 3-D
    • random noise filtering for absorption optical projection tomography
    • P. F. Feruglio, C. Vinegoni, J. Gros, A. Sbarbati, and R. Weissleder, "Block matching 3-D random noise filtering for absorption optical projection tomography," Phys. Med. Biol., vol. 55, pp. 5401-5415, 2010.
    • Phys. Med. Biol. , vol.55 , Issue.2010 , pp. 5401-5415
    • Feruglio, P.F.1    Vinegoni, C.2    Gros, J.3    Sbarbati, A.4    Weissleder, R.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.