메뉴 건너뛰기




Volumn 7, Issue 1, 2012, Pages

Combinations of histone modifications mark exon inclusion levels

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE;

EID: 84855384956     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0029911     Document Type: Article
Times cited : (33)

References (29)
  • 2
    • 77749307457 scopus 로고    scopus 로고
    • Structural studies of the spliceosome: blind men and an elephant
    • Newman AJ, Nagai K, (2010) Structural studies of the spliceosome: blind men and an elephant. Curr Opin Struct Biol 20: 82-89.
    • (2010) Curr Opin Struct Biol , vol.20 , pp. 82-89
    • Newman, A.J.1    Nagai, K.2
  • 3
    • 63649099704 scopus 로고    scopus 로고
    • Crystal structure of human spliceosomal U1 snRNP at 5.5 A resolution
    • Pomeranz Krummel DA, Oubridge C, Leung AK, Li J, Nagai K, (2009) Crystal structure of human spliceosomal U1 snRNP at 5.5 A resolution. Nature 458: 475-480.
    • (2009) Nature , vol.458 , pp. 475-480
    • Pomeranz Krummel, D.A.1    Oubridge, C.2    Leung, A.K.3    Li, J.4    Nagai, K.5
  • 4
    • 42449098125 scopus 로고    scopus 로고
    • Splicing regulation: from a parts list of regulatory elements to an integrated splicing code
    • Wang Z, Burge CB, (2008) Splicing regulation: from a parts list of regulatory elements to an integrated splicing code. RNA 14: 802-813.
    • (2008) RNA , vol.14 , pp. 802-813
    • Wang, Z.1    Burge, C.B.2
  • 6
    • 56549101959 scopus 로고    scopus 로고
    • Alternative isoform regulation in human tissue transcriptomes
    • Wang ET, Sandberg R, Luo S, Khrebtukova I, Zhang L, et al. (2008) Alternative isoform regulation in human tissue transcriptomes. Nature 456: 470-476.
    • (2008) Nature , vol.456 , pp. 470-476
    • Wang, E.T.1    Sandberg, R.2    Luo, S.3    Khrebtukova, I.4    Zhang, L.5
  • 7
    • 77950555112 scopus 로고    scopus 로고
    • Chromatin: the final frontier in splicing regulation?
    • Fox-Walsh K, Fu XD, (2010) Chromatin: the final frontier in splicing regulation? Dev Cell 18: 336-338.
    • (2010) Dev Cell , vol.18 , pp. 336-338
    • Fox-Walsh, K.1    Fu, X.D.2
  • 8
    • 70349333201 scopus 로고    scopus 로고
    • Nucleosomes are well positioned in exons and carry characteristic histone modifications
    • Andersson R, Enroth S, Rada-Iglesias A, Wadelius C, Komorowski J, (2009) Nucleosomes are well positioned in exons and carry characteristic histone modifications. Genome Res 19: 1732-1741.
    • (2009) Genome Res , vol.19 , pp. 1732-1741
    • Andersson, R.1    Enroth, S.2    Rada-Iglesias, A.3    Wadelius, C.4    Komorowski, J.5
  • 9
    • 73449092184 scopus 로고    scopus 로고
    • Discovery and annotation of functional chromatin signatures in the human genome
    • Hon G, Wang W, Ren B, (2009) Discovery and annotation of functional chromatin signatures in the human genome. PLoS Comput Biol 5: e1000566.
    • (2009) PLoS Comput Biol , vol.5
    • Hon, G.1    Wang, W.2    Ren, B.3
  • 10
    • 61349098460 scopus 로고    scopus 로고
    • Differential chromatin marking of introns and expressed exons by H3K36me3
    • Kolasinska-Zwierz P, Down T, Latorre I, Liu T, Liu XS, et al. (2009) Differential chromatin marking of introns and expressed exons by H3K36me3. Nat Genet 41: 376-381.
    • (2009) Nat Genet , vol.41 , pp. 376-381
    • Kolasinska-Zwierz, P.1    Down, T.2    Latorre, I.3    Liu, T.4    Liu, X.S.5
  • 12
    • 77954684922 scopus 로고    scopus 로고
    • From chromatin to splicing: RNA-processing as a total artwork
    • Tilgner H, Guigo R, (2010) From chromatin to splicing: RNA-processing as a total artwork. Epigenetics 5.
    • (2010) Epigenetics , vol.5
    • Tilgner, H.1    Guigo, R.2
  • 13
    • 0024021747 scopus 로고
    • Splice site selection, rate of splicing, and alternative splicing on nascent transcripts
    • Beyer AL, Osheim YN, (1988) Splice site selection, rate of splicing, and alternative splicing on nascent transcripts. Genes Dev 2: 754-765.
    • (1988) Genes Dev , vol.2 , pp. 754-765
    • Beyer, A.L.1    Osheim, Y.N.2
  • 14
    • 60149110358 scopus 로고    scopus 로고
    • Pre-mRNA processing reaches back to transcription and ahead to translation
    • Moore MJ, Proudfoot NJ, (2009) Pre-mRNA processing reaches back to transcription and ahead to translation. Cell 136: 688-700.
    • (2009) Cell , vol.136 , pp. 688-700
    • Moore, M.J.1    Proudfoot, N.J.2
  • 16
    • 44449158814 scopus 로고    scopus 로고
    • Splicing, transcription, and chromatin: a menage a trois
    • Allemand E, Batsche E, Muchardt C, (2008) Splicing, transcription, and chromatin: a menage a trois. Curr Opin Genet Dev 18: 145-151.
    • (2008) Curr Opin Genet Dev , vol.18 , pp. 145-151
    • Allemand, E.1    Batsche, E.2    Muchardt, C.3
  • 17
    • 44649196386 scopus 로고    scopus 로고
    • Functional integration of transcriptional and RNA processing machineries
    • Pandit S, Wang D, Fu XD, (2008) Functional integration of transcriptional and RNA processing machineries. Curr Opin Cell Biol 20: 260-265.
    • (2008) Curr Opin Cell Biol , vol.20 , pp. 260-265
    • Pandit, S.1    Wang, D.2    Fu, X.D.3
  • 19
    • 69949132191 scopus 로고    scopus 로고
    • Chromatin organization marks exon-intron structure
    • Schwartz S, Meshorer E, Ast G, (2009) Chromatin organization marks exon-intron structure. Nat Struct Mol Biol 16: 990-995.
    • (2009) Nat Struct Mol Biol , vol.16 , pp. 990-995
    • Schwartz, S.1    Meshorer, E.2    Ast, G.3
  • 21
    • 34249026300 scopus 로고    scopus 로고
    • High-resolution profiling of histone methylations in the human genome
    • Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, et al. (2007) High-resolution profiling of histone methylations in the human genome. Cell 129: 823-837.
    • (2007) Cell , vol.129 , pp. 823-837
    • Barski, A.1    Cuddapah, S.2    Cui, K.3    Roh, T.Y.4    Schones, D.E.5
  • 22
    • 46249112085 scopus 로고    scopus 로고
    • Combinatorial patterns of histone acetylations and methylations in the human genome
    • Wang Z, Zang C, Rosenfeld JA, Schones DE, Barski A, et al. (2008) Combinatorial patterns of histone acetylations and methylations in the human genome. Nat Genet 40: 897-903.
    • (2008) Nat Genet , vol.40 , pp. 897-903
    • Wang, Z.1    Zang, C.2    Rosenfeld, J.A.3    Schones, D.E.4    Barski, A.5
  • 23
    • 48749100692 scopus 로고    scopus 로고
    • Regulation of CD45 alternative splicing by heterogeneous ribonucleoprotein, hnRNPLL
    • Oberdoerffer S, Moita LF, Neems D, Freitas RP, Hacohen N, et al. (2008) Regulation of CD45 alternative splicing by heterogeneous ribonucleoprotein, hnRNPLL. Science 321: 686-691.
    • (2008) Science , vol.321 , pp. 686-691
    • Oberdoerffer, S.1    Moita, L.F.2    Neems, D.3    Freitas, R.P.4    Hacohen, N.5
  • 26
    • 0038223147 scopus 로고    scopus 로고
    • The ROSETTA Rough Set Software System
    • In: Klösgen W, Zytkow J, editors, Discovery, Oxford University Press
    • Komorowski J, Øhrn A, Skowron A, (2002) The ROSETTA Rough Set Software System. In: Klösgen W, Zytkow J, editors. Handbook of Data Mining and Knowledge Discovery Oxford University Press.
    • (2002) Handbook of Data Mining and Knowledge
    • Komorowski, J.1    Øhrn, A.2    Skowron, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.