TMT: A tool to guide users in finding information on clinical texts;TMT: Una herramienta para guiar a los usuarios en la búsqueda de información sobre textos clínicos

Procesamiento del Lenguaje Natural

Volumn 46, Issue , 2011, Pages 27-34

  Aparicio, Fernando ^a   De Buenaga, Manuel ^a   Rubio, Margarita ^a   Hernando, María Asunción ^a   Gachet, Diego ^a   Puertas, Enrique ^a   Giráldez, Ignacio ^a  

^a UNIVERSIDAD EUROPEA DE MADRID   (Spain)

Author keywords

Bioinformatics; Case based learning; Information retrieval; NER; Ontologies; Translational medicine

Indexed keywords

EID: 84855217335     PISSN: 11355948     EISSN: 19897553     Source Type: Journal    
DOI: None     Document Type: Review

References (25)

1. Auer, S., C. Bizer, G. Kobilarov, J. Lehmann, R. Cyganiak y Z. Ives. 2007. DBpedia: A Nucleus for a Web of Open Data. En The Semantic Web, Volume 4825 of Lecture Notes in Computer Science, Chapter 52, 722-735-735. Berlin (Heidelberg).
2. Bellazzi R., C. Larizza, M. Gabetta, G. Milani, A. Nuzzo, V. Favalli y E. Arbustini. 2010. Translational Bioinformatics: Challenges and Opportunities for Case-Based Reasoning and Decision Support. LNCS: Case-Based Reasoning, Vol. 6176, pp. 1-11.
3. Bizer, C., J. Lehmann, G. Kobilarov, S. Auer, C. Becker, R. Cyganiak y S. Hellmann. 2009. DBpedia - A crystallization point for the Web of Data. Web Semantics: Science, Services and Agents on the World Wide Web 7(3):154-165.
4. Bollacker, K., C. Evans, P. Paritosh, T. Sturge y J. Taylor. 2008. Freebase: a collaboratively created graph database for structuring human knowledge. En Proceedings of the international conference on Management of data, ACM SIGMOD, pp. 1247-1250. Vancouver (Canada).
5. Brenes, D. J., D. G. Avello y K. P. González. 2009. Survey and evaluation of query intent detection methods. En Proceedings of the workshop on Web Search Click Data, pp. 1-7. Barcelona (Spain).
6. Clifford, G., D. J. Scott y M. Villarroel. 2010. User Guide and Documentation for the MIMIC II Database, Rev: 259. Cambridge, MA, USA.
7. Dowell, K. G., M. S. McAndrews-Hill, D. P. Hill, H. J. Drabkin y J. A. Blake. 2009. Integrating text mining into the MGI biocuration workflow. Database 2009(0):bap019+.
8. Han, X. y J. Zhao. 2009. CASIANED: Web Personal Name Disambiguation Based on Professional Categorization. En Proceedings of 2nd Web People Search Evaluation Workshop, WePS2, Madrid (Spain).
9. Hearst M. A. 2008. UIs for Faceted Navigation: Recent Advances and Remaining Open Problems. En Proceedings of the Second Workshop on Human-Computer Interaction and Information Retrieval, pp. 13-17, Redmond
10. Jonquet, C., N. Shah y M. Musen. 2009. The Open Biomedical Annotator. En AMIA Summit on Translational Bioinformatics, pp. 56-60, San Francisco (CA).
11. Jonquet, C., M. A. Musen y N. H. Shah. 2010. Building a biomedical ontology recommender web service. Biomedical semantics, 1(1):S1.
12. Luo, G. y C. Tang. 2008. On iterative intelligent medical search. En Proceedings of the 31st annual international conference on Research and development in information retrieval, ACM SIGIR, pp. 3-10, Singapore.
13. Meyer S., J. Degener, J. Giannandrea y B. Michener. 2010. Optimizing schema-last tuple-store queries in graphd. En Proceedings of the International Conference on Management of Data, ACM SIGMOD, pp. 1047-1056, Indianapolis (Indiana).
14. Mirhaji, P., M. Zhu, M. Vagnoni, E. Bernstam, J. Zhang y J. Smith. 2009. Ontology driven integration platform for clinical and translational research. BMC Bioinformatics 10(Suppl 2):S2+.
15. Musen, M., N. Shah, N. Noy, B. Dai, M. Dorf, N. Griffith, J. D. Buntrock, C. Jonquet, M. J. Montegut y D. L. Rubin. 2008. BioPortal: Ontologies and Data Resources with the Click of a Mouse. En Annual Symposium proceedings, AMIA, pp. 1223-1224.
16. Noy, N. F., N. H. Shah, P. L. Whetzel, B. Dai, M. Dorf, N. Griffith, C. Jonquet, D. L. Rubin, M. A. Storey, C. G. Chute y M. A. Musen. 2009. BioPortal: ontologies and integrated data resources at the click of a mouse. Nucleic acids research 37 (Web Server issue): W170-173.
17. Ruiz-Rico, F., J. Vicedo y M. Rubio-Sánchez. 2008. Multilingual assistant for medical diagnosing and drug prescription based on category ranking. En 22nd International Conference on Computational Linguistics: Demonstration Papers, ACL COLING, pp. 169-172, Morristown (NJ).
18. Ruttenberg, A., J. A. Rees, M. Samwald y M. S. Marshall. 2009. Life sciences on the Semantic Web: the Neurocommons and beyond. Briefings in bioinformatics 10(2):193-204.
19. Sarkar, I. 2010. Biomedical informatics and translational medicine. Translational medicine 8(1):22+.
20. Shariff, S., M. Cuerden, R. B. Haynes, K. A. McKibbon, N. Wilczynski, A. Iansavichus, M. Speechley, A. Thind y A. Garg. 2010. Evaluating the impact of MEDLINE filters on evidence retrieval: study protocol. Implementation Science 5(1):58+.
21. Trivedi, M. 2009. A study of search engines for health sciences. Library and Information Science, 1(5): 069-073
22. Twigger, S., J. Geiger y J. Smith. 2009. Using the NCBO Web Services for Concept Recognition and Ontology Annotation of Expression Datasets. En Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, SWAT4LS, Vol-559.
23. Watson, M., A. Smith y S. Watter. 2005. Leximancer concept mapping of patient case studies. En LNCS: Part III. Knowledge-based intelligent information and engineering systems 9th international conference, pp. 1232-1238, Berlin (Heidelberg).
24. Weichselbraun, A. 2009. A Utility Centered Approach for Evaluating and Optimizing Geo-Tagging. En First International Conference on Knowledge Discovery and Information Retrieval, KDIR, pp. 134-139, Madeira (Portugal).
25. Woolf, S. H. 2008. The Meaning of Translational Research and Why It Matters. JAMA 299(2):211-213.