PsbO, PsbP, and PsbQ of photosystem II are encoded by gene families in Nicotiana benthamiana. Structure and functionality of their isoforms

Photosynthetica

Volumn 49, Issue 4, 2011, Pages 573-580

  Perez Bueno M L ^a,b   Baron M ^a   Garcia Luque I ^a  

^a CSIC   (Spain)

^b CENTRO DE INVESTIGACIONES BIOLÓGICAS   (Spain)

Author keywords

oxygen evolving complex; photosystem II; PsbO; PsbP; PsbQ; stress

Indexed keywords

NICOTIANA BENTHAMIANA;

EID: 84855186454     PISSN: 03003604     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11099-011-0070-7     Document Type: Article

References (35)

1. Arnold, K., Bordoli, L., Kopp, J., Schwede, T.: The SWISSMODEL workspace: a web-based environment for protein structure homology modelling. - Bioinformatics 22: 195-201, 2006.
2. Blouin, C., Butt, D., Roger, A. J.: Rapid evolution in conformational space: a study of loop regions in a ubiquitous GTP binding domain. - Protein Sci. 13: 608-616, 2004.
3. Bondarava, N., Beyer, P., Krieger-Liszkay, A.: Function of the 23 kDa extrinsic protein of Photosystem II as a manganese binding protein and its role in photoactivation. - Biochim. Biophys. Acta 1708: 63-70, 2005.
4. Bricker, T. M., Frankel, L. K.: Carboxylate groups on the manganese-stabilizing protein are required for efficient binding of the 24 kDa extrinsic protein to photosystem II. - Biochemistry 42: 2056-2061, 2003.
5. Chu, H. A., Nguyen, A. P., Debus, R. J.: Site-directed photosystem II mutants with perturbed oxygen-evolving properties. 2. Increased binding or photooxidation of manganese in the absence of the extrinsic 33-kDa polypeptide in vivo. - Biochemistry 33: 6150-6157, 1994.
6. de las Rivas, J., Barber, J.: Analysis of the structure of the PsbO protein and its implications. - Photosynth. Res. 81: 329-343, 2004.
7. de las Rivas, J., Roman, A.: Structure and evolution of the extrinsic proteins that stabilize the oxygen-evolving engine. - Photochem. Photobiol. Sci. 4: 1003-1010, 2005.
8. Eisenberg-Domovich, Y., Oelmuller, R., Herrmann, R. G., Ohad, I.: Role of the RCII-D1 protein in the reversible association of the oxygen-evolving complex proteins with the lumenal side of photosystem II. - J. Biol. Chem. 270: 30181-30186, 1995.
9. Emanuelsson, O., Nielsen, H., Brunak, S., Von Heijne, G.: Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. - J. Mol. Biol. 300: 1005-1016, 2000.
10. Enami, I., Okumura, A., Nagao, R., Suzuki, T., Iwai, M., Shen, J. R.: Structures and functions of the extrinsic proteins of photosystem II from different species. - Photosynth. Res. 98: 349-363, 2008.
11. Gasteiger, E., Hoogland, C., Gattiker, A., Duvaud, S. E., Wilkins, M. R., Appel, R. D., Bairoch, A.: Protein Identification and Analysis Tools on the ExPASy Server. - In: (ed.): The Proteomics Protocols Handbook. Pp. 571-607. 2005.
12. Gouet, P., Courcelle, E., Stuart, D. I., Metoz, F.: ESPript: multiple sequence alignments in PostScript. - Bioinformatics 15: 305-308, 1999.
13. Ido, K., Ifuku, K., Yamamoto, Y., Ishihara, S., Murakami, A., Takabe, K., Miyake, C., Sato, F.: Knockdown of the PsbP protein does not prevent assembly of the dimeric PSII core complex but impairs accumulation of photosystem II supercomplexes in tobacco. - Biochim. Biophys. Acta 1787: 873-881, 2009.
14. Ifuku, K., Nakatsu, T., Kato, H. Sato, F.: Crystal structure of the PsbP protein of photosystem II from Nicotiana tabacum - EMBO Rep. 5: 362-367, 2004.
15. Ifuku, K., Nakatsu, T., Shimamoto, R., Yamamoto, Y., Ishihara, S., Kato, H., Sato, F.: Structure and function of the PsbP protein of Photosystem II from higher plants. - Photosynth. Res. 84: 251-255, 2005.
16. Ifuku, K., Sato, F.: Importance of the N-terminal sequence of the extrinsic 23 kDa polypeptide in Photosystem II in ion retention in oxygen evolution. - Biochim. Biophys. Acta 1546: 196-204, 2001.
17. 2+ retention in photosystem II. - Plant Cell Physiol. 43: 1244-1249, 2002.
18. Ishihara, S., Yamamoto, Y., Ifuku, K., Sato, F.: Functional analysis of four members of the PsbP family in photosystem II in Nicotiana tabacum using differential RNA interference. - Plant Cell Physiol. 46: 1885-1893, 2005.
19. 4 cluster. - Biochim. Biophys. Acta 1797: 566-575, 2010.
20. Larkin, M. A., Blackshields, G., Brown, N. P., Chenna, R., McGettigan, P. A., McWilliam, H., Valentin, F., Wallace, I. M., Wilm, A., Lopez, R., Thompson, J. D., Gibson, T. J., Higgins, D. G.: Clustal W and Clustal X version 2. 0. - Bioinformatics 23: 2947-2948, 2007.
21. Logemann, J., Schell, J., Willmitzer, L.: Improved method for the isolation of RNA from plant tissues. - Anal. Biochem. 163: 16-20, 1987.
22. Loll, B., Kern, J., Saenger, W., Zouni, A., Biesiadka, J.: Towards complete cofactor arrangement in the 3. 0 Å resolution structure of photosystem II. - Nature 438: 1040-1044, 2005.
23. Lundin, B., Hansson, M., Schoefs, B., Vener, A. V., Spetea, C.: The Arabidopsis PsbO2 protein regulates dephosphorylation and turnover of the photosystem II reaction centre D1 protein. - Plant J. 49: 528-539, 2007a.
24. Lundin, B., Thuswaldner, S., Shutova, T., Eshaghi, S., Samuelsson, G., Barber, J., Andersson, B., Spetea, C.: Subsequent events to GTP binding by the plant PsbO protein: Structural changes, GTP hydrolysis and dissociation from the photosystem II complex. - Biochim. Biophys. Acta 1767: 500-508, 2007b.
25. Murakami, R., Ifuku, K., Takabayashi, A., Shikanai, T., Endo, T., Sato, F.: Functional dissection of two Arabidopsis PsbO proteins: PsbO1 and PsbO2. - FEBS J. 272: 2165-2175, 2005.
26. Nield, J., Barber, J.: Refinement of the structural model for the Photosystem II supercomplex of higher plants. - Biochim. Biophys. Acta 1757: 353-361, 2006.
27. Peltier, J. B., Friso, G., Kalume, D. E., Roepstorff, P., Adamaska, I., van Wick, K. J.: Proteomics of the chloroplast: systematic identification and targeting analysis of lumenal and peripheral thylakoid proteins. - Plant Cell 12: 319-341, 2000.
28. Pérez-Bueno, M. L., Rahoutei, J., Sajnani, C., García-Luque, I., Barón, M.: Proteomic analysis of the oxygen-evolving complex of photosystem II under biotec stress: Studies on Nicotiana benthamiana infected with tobamoviruses. - Proteomics 4: 418-425, 2004.
29. Popelkova, H., Commet, A., Kuntzleman, T., Yocum, C. F.: Inorganic cofactor stabilization and retention: the unique functions of the two PsbO subunits of eukaryotic photosystem II. - Biochemistry 47: 12593-12600, 2008.
30. Rahoutei, J., Garcia-Luque, I., Baron, M.: Inhibition of photosynthesis by viral infection: Effect on PSII structure and function. - Physiol. Plant. 110: 286-292, 2000.
31. Seidler, A.: The extrinsic polypeptides of Photosystem II. - Biochim. Biophys. Acta 1277: 35-60, 1996.
32. Suorsa, M., Aro, E. M.: Expression, assembly and auxiliary functions of photosystem II oxygen-evolving proteins in higher plants. - Photosynth. Res. 93: 89-100, 2007.
33. Takahashi, H., Ehara, Y., Hirano, H.: A protein in the oxygenevolving complex in the chloroplast is associated with symptom expression on tobacco leaves infected with cucumber mosaic virus strain Y. - Plant Mol. Biol. 16: 689-698, 1991.
34. Tohri, A., Dohmae, N., Suzuki, T., Ohta, H., Inoue, Y., Enami, I.: Identification of domains on the extrinsic 23 kDa protein possibly involved in electrostatic interaction with the extrinsic 33 kDa protein in spinach photosystem II. - Eur. J. Biochem. 271: 962-971, 2004.
35. Yamamoto, Y., Ishikawa, Y., Nakatani, E., Yamada, M., Zhang, H., Wydrzynski, T.: Role of an extrinsic 33 kilodalton protein of photosystem II in the turnover of the reaction centerbinding protein D1 during photoinhibition. - Biochemistry 37: 1565-1574, 1998.