Structure and evolution of the extrinsic proteins that stabilize the oxygen-evolving engine

Photochemical and Photobiological Sciences

Volumn 4, Issue 12, 2005, Pages 1003-1010

  De Las Rivas, Javier ^a   Roman, Angel ^a  

^a CSIC   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

MANGANESE; OXYGEN; PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; HIGHER PLANT; MOLECULAR EVOLUTION; PRIORITY JOURNAL; PROTEIN FUNCTION; PROTEIN STRUCTURE;

EMBRYOPHYTA; EUKARYOTA; PROKARYOTA;

EID: 29144456629     PISSN: 1474905X     EISSN: 14749092     Source Type: Journal    
DOI: 10.1039/b506874f     Document Type: Article

References (31)

1. K. N. Ferreira T. M. Iverson K. Maghlaoui J. Barber S. Iwata Architecture of the photosynthetic oxygen-evolving centre Science 2004 303 5665 1831-8.
2. S. Iwata J. Barber Structure of photosystem II and molecular architecture of the oxygen-evolving centre Curr. Opin. Struct. Biol. 2004 14 4 447-53.
3. J. De Las Rivas M. Balsera J. Barber Evolution of oxygenic photosynthesis: genome-wide analysis of the OEC extrinsic proteins Trends Plant Sci. 2004 9 1 18-25.
4. A. Zouni H. T. Witt J. Kern P. Fromme N. Krauss W. Saenger P. Orth Crystal structure of photosystem II from Synechococcus elongatus at 3.8 Å resolution Nature 2001 409 6821 739-43.
5. N. Kamiya J. R. Shen Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-Å resolution Proc. Natl. Acad. Sci. U. S. A. 2003 100 1 98-103.
6. P. Fromme J. Kern B. Loll J. Biesiadka W. Saenger H. T. Witt N. Krauss A. Zouni Functional implications on the mechanism of the function of photosystem II including water oxidation based on the structure of photosystem II Philos. Trans. R. Soc. London, Ser. B 2002 357 1426 1337-44.
7. V. Calderone M. Trabucco A. Vujicic R. Battistutta G. M. Giacometti F. Andreucci R. Barbato G. Zanotti Crystal structure of the PsbQ protein of photosystem II from higher plants EMBO Rep. 2003 4 9 900-5.
8. K. Ifuku T. Nakatsu H. Kato F. Sato Crystallization and preliminary crystallographic studies on the extrinsic 23 kDa protein in the oxygen-evolving complex of photosystem II Acta Crystallogr., Sect. D: Biol. Crystallogr. 2003 59 Pt 8 1462-3.
9. M. Balsera J. B. Arellano J. L. Revuelta J. De Las Rivas J. A. Hermoso The 1.49 Å resolution crystal structure of PsbQ from photosystem II of Spinacia oleracea reveals a PPII structure in the N-terminal region J. Mol. Biol. 2005 359 5 1051-60.
10. Y. Nakamura T. Kaneko S. Sato M. Mimuro H. Miyashita T. Tsuchiya S. Sasamoto A. Watanabe K. Kawashima Y. Kishida C. Kiyokawa M. Kohara M. Matsumoto A. Matsuno N. Nakazaki S. Shimpo C. Takeuchi M. Yamada S. Tabata Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids DNA Res. 2003 10 4 137-45.
11. M. K. Kuhner J. Felsenstein A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates Mol. Biol. Evol. 1994 11 3 459-68.
12. M. K. Kuhner J. Yamato J. Felsenstein Maximum likelihood estimation of recombination rates from population data Genetics 2000 156 3 1393-401.
13. Y. Kashino W. M. Lauber J. A. Carroll Q. Wang J. Whitmarsh K. Satoh H. B. Pakrasi Proteomic analysis of a highly active photosystem II preparation from the cyanobacterium Synechocystis sp. PCC 6803 reveals the presence of novel polypeptides Biochemistry 2002 41 25 8004-12.
14. H. Ohta T. Suzuki M. Ueno A. Okumura S. Yoshihara J. R. Shen I. Enami Extrinsic proteins of photosystem II: an intermediate member of PsbQ protein family in red algal PS II Eur. J. Biochem. 2003 270 20 4156-63.
15. X. Yi M. McChargue S. Laborde L. K. Frankel T. M. Bricker The Manganese-stabilizing Protein Is Required for Photosystem II Assembly/Stability and Photoautotrophy in Higher Plants J. Biol. Chem. 2005 280 16 16170-4.
16. T. C. Summerfield J. A. Shand F. K. Bentley J. J. Eaton-Rye PsbQ (Sll1638) in Synechocystis sp. PCC 6803 is required for photosystem II activity in specific mutants and in nutrient-limiting conditions Biochemistry 2005 44 2 805-15.
17. L. E. Thornton H. Ohkawa J. L. Roose Y. Kashino N. Keren H. B. Pakrasi Homologs of plant PsbP and PsbQ proteins are necessary for regulation of photosystem II activity in the cyanobacterium Synechocystis 6803 Plant Cell 2004 16 8 2164-75.
18. J. De Las Rivas J. Barber Analysis of the structure of the PsbO protein and its implications Photosynth. Res. 2004 81 329-343.
19. F. M. Pearl C. F. Bennett J. E. Bray A. P. Harrison N. Martin A. Shepherd I. Sillitoe J. Thornton C. A. Orengo The CATH database: an extended protein family resource for structural and functional genomics Nucleic Acids Res. 2003 31 1 452-5.
20. A. Andreeva D. Howorth S. E. Brenner T. J. Hubbard C. Chothia A. G. Murzin SCOP database in 2004: refinements integrate structure and sequence family data Nucleic Acids Res. 2004 32 Database issue D226-9.
21. A. Harrison F. Pearl I. Sillitoe T. Slidel R. Mott J. Thornton C. Orengo Recognizing the fold of a protein structure Bioinformatics 2003 19 14 1748-59.
22. M. Oki T. Nishimoto A protein required for nuclear-protein import, Mog1p, directly interacts with GTP-Gsp1p, the Saccharomyces cerevisiae ran homologue Proc. Natl. Acad. Sci. U. S. A. 1998 95 26 15388-93.
23. S. M. Steggerda B. M. Paschal The mammalian Mog1 protein is a guanine nucleotide release factor for Ran J. Biol. Chem. 2000 275 30 23175-80.
24. J. M. Lu R. J. Deschenes J. S. Fassler Role for the Ran binding protein, Mog1p, in Saccharomyces cerevisiae SLN1-SKN7 signal transduction Eukaryotic Cell 2004 3 6 1544-56.
25. C. Spetea T. Hundal F. Lohmann B. Andersson GTP bound to chloroplast thylakoid membranes is required for light-induced, multienzyme degradation of the photosystem II D1 protein Proc. Natl. Acad. Sci. U. S. A. 1999 96 11 6547-52.
26. C. Spetea N. Keren T. Hundal J. M. Doan I. Ohad B. Andersson GTP enhances the degradation of the photosystem II D1 protein irrespective of its conformational heterogeneity at the Q(B) site J. Biol. Chem. 2000 275 10 7205-11.
27. C. Spetea T. Hundal B. Lundin M. Heddad I. Adamska B. Andersson Multiple evidence for nucleotide metabolism in the chloroplast thylakoid lumen Proc. Natl. Acad. Sci. U. S. A. 2004 101 5 1409-14.
28. M. Balsera J. B. Arellano J. R. Gutierrez P. Heredia J. L. Revuelta J. De Las Rivas, Structural analysis of the PsbQ protein of photosystem II by Fourier transform infrared and circular dichroic spectroscopy and by bioinformatic methods Biochemistry 2003 42 4 1000-7.
29. M. Balsera J. B. Arellano F. Pazos D. Devos A. Valencia J. De Las Rivas, The single tryptophan of the PsbQ protein of photosystem II is at the end of a 4-alpha-helical bundle domain Eur. J. Biochem. 2003 270 19 3916-27.
30. B. K. Kay M. P. Williamson M. Sudol The importance of being proline: the interaction of proline-rich motifs in signaling proteins with their cognate domains FASEB J. 2000 14 2 231-41.
31. C. Oneyama T. Agatsuma Y. Kanda H. Nakano S. V. Sharma S. Nakano F. Narazaki K. Tatsuta Synthetic inhibitors of proline-rich ligand-mediated protein–protein interaction: potent analogs of UCS15A Chem. Biol. 2003 10 5 443-51.