OFF-to-ON type fluorescent probe for the detection of 8-oxo-dG in DNA by the Adap-masked ODN probe

Bioorganic and Medicinal Chemistry Letters

Volumn 22, Issue 1, 2012, Pages 543-546

  Taniguchi, Yosuke ^a,b   Koga, Yohei ^a   Fukabori, Keitaro ^a   Kawaguchi, Ryota ^a   Sasaki, Shigeki ^a,b  

^a KYUSHU UNIVERSITY   (Japan)

^b JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

8 Oxo dG; Adap masked ODN; FRET; Non natural type base pair; OFF to ON

Indexed keywords

8 HYDROXYDEOXYGUANOSINE; ADENOSINE 1,3 DIAZAPHENOXAZINE; DNA; DOUBLE STRANDED DNA; NUCLEOSIDE ANALOG; UNCLASSIFIED DRUG;

ARTICLE; BASE PAIRING; DNA BINDING; DNA SEQUENCE; FLUORESCENCE RESONANCE ENERGY TRANSFER; MOLECULAR BEACON; MOLECULAR INTERACTION; MOLECULAR RECOGNITION; OLIGONUCLEOTIDE PROBE;

ADENOSINE; BASE SEQUENCE; DEOXYGUANOSINE; DNA; DRUG DESIGN; FLUORESCENCE RESONANCE ENERGY TRANSFER; FLUORESCENT DYES; HYDROGEN-ION CONCENTRATION; MODELS, CHEMICAL; MOLECULAR SEQUENCE DATA; NUCLEOSIDES; OLIGONUCLEOTIDES; RNA; TEMPERATURE; TIME FACTORS;

EID: 84655167058     PISSN: 0960894X     EISSN: 14643405     Source Type: Journal    
DOI: 10.1016/j.bmcl.2011.10.093     Document Type: Article

References (33)

1. S. Shibutani, M. Takeshita, and A.P. Grollaman Nature 349 1991 431
2. L.L. Wu, C.-C. Chiou, P.-Y. Chang, and J.T. Wu Clin. Chim. Acta 339 2004 1
3. H. Kasai Mutat. Res. 387 1997 147
4. K.P. Cantor Toxicology 221 2006 197
5. A.R. Collins Am. J. Clin. Nutr. 81 2005 261S
6. P. Jenner, and C.W. Olanow Neurology 47 1996 S161
7. S. Loft, and H.E. Poulsen J. Mol. Med. 74 1996 297
8. I. Dalle-Donne, R. Rossi, R. Colombo, D. Giustarini, and A. Milzani Clin. Chem. 52 2006 601
9. V.A. Bohr Free Radical Biol. Med. 32 2002 804
10. G. Barja Trends Neurosci. 27 2004 595
11. M.F. Beal Ann. Neurol. 58 2005 495
12. J.P. Pouget, T. Douki, J. Richard, and M.J. Cadet Chem. Res. Toxicol. 13 2000 541
13. A. Siomek, A. Rytarowska, A. Szaflarska-Poplawska, D. Gackowski, R. Rozalski, T. Dziaman, M. Czerwionka-Szaflarska, and R. Olinski Carcinogenesis 27 2006 405
14. T. Hofer, A.Y. Seo, M. Prudencio, and C. Leeuwenburgh Biol. Chem. 387 2006 103
15. H. Wiseman, H. Kaur, and B. Halliwell Cancer Lett. 93 1995 113
16. M. Dizdaroglu, P. Jaruga, M. Birincioglu, and H. Rodriguez Free Radical Biol. Med. 32 2002 1102
17. M. Lodovici, C. Casalini, R. Cariaggi, L. Michelucci, and P. Dolara Free Radical Biol. Med. 28 2000 13
18. Y. Nakabeppu, D. Tsuchimoto, M. Furuichi, and K. Sakumi Free Radical Res. 38 2004 423
19. Y. Nakae, P.J. Stoward, I.A. Bespalov, R.J. Melamede, and S.S. Wallace Histochem. Cell Biol. 124 2005 335
20. R.P. Soultanakis, R.J. Melamede, I.A. Bespalob, S.S. Wallace, K.B. Beckman, B.N. Ames, D.J. Taatjes, and W.M.W. Janssen-Heininger Free Radical Biol. Med. 28 2000 987
21. C.C. Chiou, P.Y. Chang, E.C. Chan, T.L. Wu, K.C. Tsao, and J.T. Wu Clin. Chim. Acta 334 2003 87
22. N. Machella, F. Regoli, A. Cambria, and R.M. Santella Mar. Environ. Res. 58 2004 725
23. L. Xue, and M.M. Greenberg J. Am. Chem. Soc. 129 2007 7010
24. T. Nasr, Z. Li, O. Nakagawa, Y. Taniguchi, S. Ono, and S. Sasaki Bioorg. Med. Chem. Lett. 19 2009 727
25. Y. Taniguchi, R. Kawaguchi, and S. Sasaki J. Am. Chem. Soc. 133 2011 7272
26. S. Tyagi, and F.R. Kramer Nat. Biotechnol. 14 1996 303
27. K. Wang, Z. Tang, C.J. Yang, Y. Kim, X. Fang, W. Li, Y. Wu, C.D. Medley, Z. Cao, J. Li, P. Colon, H. Lin, and W. Tan Angew. Chem., Int. Ed. 47 2008 2
28. W. Tan, K. Wang, and T.J. Drake Curr. Opin. Chem. Biol. 8 2004 547
29. W.J. Kim, T. Akaike, and A. Maruyama J. Am. Chem. Soc. 124 2002 12676
30. W.J. Kim, Y. Sato, T. Akaike, and Maruyama Nat. Mater. 2 2003 815
31. K. Yamana, Y. Ohshita, Y. Fukunaga, M. Nakamura, and A. Maruyama Bioorg. Med. Chem. 16 2008 78
32. S.A.E. Marras, F.R. Kramer, and S. Tyagi Nucleic Acids Res. 30 2002 e122
33. MALDI TOF-MS: ODN1 found 4586.20 (calcd 4588.89), ODN7 found 4637.72 (calcd 4637.80).