A generalized multivariate autoregressive (GmAR)-based approach for EEG source connectivity analysis

IEEE Transactions on Signal Processing

Volumn 60, Issue 1, 2012, Pages 453-465

  Chiang, Joyce ^a   Wang, Z Jane ^a   McKeown, Martin J ^a  

^a UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

Connectivity analysis; electroencephalography (EEG); multivariate autoregressive model; Parkinson's disease; partial directed coherence (PDC); source extraction

Indexed keywords

CONNECTIVITY ANALYSIS; MULTIVARIATE AUTOREGRESSIVE MODEL; PARKINSON'S DISEASE; PARTIAL DIRECTED COHERENCE; SOURCE EXTRACTION;

BRAIN MODELS; ELECTROENCEPHALOGRAPHY; ELECTROPHYSIOLOGY; ESTIMATION; GAUSSIAN NOISE (ELECTRONIC); MAXIMUM LIKELIHOOD ESTIMATION; VISUAL COMMUNICATION;

COMPUTER SIMULATION;

EID: 84555197069     PISSN: 1053587X     EISSN: None     Source Type: Journal    
DOI: 10.1109/TSP.2011.2166392     Document Type: Article

References (36)

1. E. Pereda, R. Quiroga, and J. Bhattacharya, "Nonlinear multivariate analysis of neurophysiological signals," Progress Neurobiol., vol. 77, no. 1-2, pp. 1-37, 2005.
2. M. Ding, Y. Chen, and S. Bressler, "Granger causality: Basic theory and application to neuroscience," Handbook of Time Series Anal., pp. 437-460, 2006.
3. L. Baccalá and K. Sameshima, "Partial directed coherence: A new concept in neural structure determination," Biolog. Cybern., vol. 84, no. 6, pp. 463-474, 2001.
4. M. Kamiński, M. Ding, W. Truccolo, and S. Bressler, "Evaluating causal relations in neural systems: Granger causality, directed transfer function and statistical assessment of significance," Biolog. Cybern., vol. 85, no. 2, pp. 145-157, 2001.
5. P. Nunez, R. Srinivasan, A. Westdorp, R. Wijesinghe, D. Tucker, R. Silberstein, and P. Cadusch, "EEG coherency I: Statistics, reference electrode, volume conduction, Laplacians, cortical imaging, and interpretation at multiple scales," Electroencephalogr. Clin. Neurophysiol., vol. 103, no. 5, pp. 499-515, 1997.
6. F. Babiloni, C. Babiloni, F. Carducci, L. Fattorini, P. Onorati, and A. Urbano, "Spline Laplacian estimate of EEG potentials over a realistic magnetic resonance-constructed scalp surface model," Electroencephalogr. Clin. Neurophysiol., vol. 98, no. 4, pp. 363-373, 1996.
7. G. Gómez-Herrero, M. Atienza, K. Egiazarian, and J. Cantero, "Measuring directional coupling between EEG sources," Neuroimage, vol.43, no. 3, pp. 497-508, 2008.
8. J. Schoffelen and J. Gross, "Source connectivity analysis with MEG and EEG," Human Brain Mapping, vol. 30, no. 6, pp. 1857-1865, 2009.
9. S. Haufe, R. Tomioka, G. Nolte, K. Müller, and M. Kawanabe, "Modeling sparse connectivity between underlying brain sources for EEG/ MEG," IEEE Trans. Biomed. Eng., vol. 57, no. 8, pp. 1954-1963, 2010.
10. S. Baillet, J. Mosher, and R. Leahy, "Electromagnetic brain mapping," IEEE Signal Process. Mag., vol. 18, no. 6, pp. 14-30, 2001.
11. Z. Koles, "Trends in EEG source localization," Electroencephalogr. Clin. Neurophysiol., vol. 106, no. 2, pp. 127-137, 1998.
12. L. Zhukov, D. Weinstein, and C. Johnson, "Independent component analysis for EEG source localization," IEEE Eng. Med. Biol. Mag., vol. 19, no. 3, pp. 87-96, 2002.
13. A. Hyvärinen, P. Ramkumar, L. Parkkonen, and R. Hari, "Independent component analysis of short-time Fourier transforms for spontaneous EEG/MEG analysis," NeuroImage, vol. 49, no. 1, pp. 257-271, 2010.
14. A. Hyvärinen, K. Zhang, S. Shimizu, and P. Hoyer, "Estimation of a structural vector autoregression model using non-Gaussianity," J. Mach. Learn. Res., vol. 11, no. 1, pp. 1709-1731, 2010.
15. C. James and C. Hesse, "Independent component analysis for biomedical signals," Physiolog. Measure. , vol. 26, no. 1, pp. R15-R39, 2005.
16. T. Jung, S. Makeig, C. Humphries, T. Lee, M. Mckeown, V. Iragui, and T. Sejnowski, "Removing electroencephalographic artifacts by blind source separation," Psychophysiol., vol. 37, no. 2, pp. 163-178, 2000.
17. B. Cheung, B. Riedner, G. Tononi, and B. Van Veen, "Estimation of cortical connectivity from EEG using state-space models," IEEE Trans. Biomed. Eng., vol. 57, no. 9, pp. 2122-2134, 2010.
18. W. Penny, R. Everson, and S. Roberts, "Hidden Markov independent component analysis," Adv. Independ. Compon. Anal., pp. 3-22, 2000.
19. S. Choi, A. Cichocki, and S. Amari, "Flexible independent component analysis," J. VLSI Signal Process., vol. 26, no. 1, pp. 25-38, 2000.
20. G. Casella, R. Berger, and R. Berger, Statistical Inference, 2nd ed. New York: Duxbury , 2002.
21. J. Cantero, M. Atienza, G. Gomez-Herrero, A. Cruz-Vadell, E. Gil-Neciga, R. Rodriguez-Romero, and D. Garcia-Solis, "Functional integrity of thalamocortical circuits differentiates normal aging from mild cognitive impairment," Human Brain Mapping, vol. 30, no. 12, pp. 3944-3957, 2009.
22. J. Himberg, A. Hyvärinen, and F. Esposito, "Validating the independent components of neuroimaging time series via clustering and visualization," Neuroimage, vol. 22, no. 3, pp. 1214-1222, 2004.
23. G. Gómez-Herrero,MVAR-ICA Toolbox forMATLAB 2008 [Online]. Available: http://www.cs.tut.fi/~gomezher/projects/eeg/mvarica.htm
24. D. Brody, F. Terry, and R. Ideker, "Eccentric dipole in a spherical medium: Generalized expression for surface potentials," IEEE Trans. Biomed. Eng., vol. 20, no. 2, pp. 141-143, 1973.
25. P. Geladi and B. Kowalski, "Partial least-squares regression: A tutorial," Analytica Chimica Acta, vol. 185, no. 1, pp. 1-17, 1986.
26. P. Tichavsky and Z.Koldovsky, "Optimal pairing of signal components separated by blind techniques," IEEE Signal Process. Lett., vol. 11, no. 2, pp. 119-122, 2004.
27. T. Schneider and A. Neumaier, "Algorithm 808: ARfitA Matlab package for the estimation of parameters and eigenmodes of multivariate autoregressive models," ACM Trans. Math. Software (TOMS), vol. 27, no. 1, pp. 58-65, 2001.
28. G. Gómez-Herrero, Automatic Artifact Removal (AAR) Toolbox v1. 3 (Release 09.12. 2007) for MATLAB 2007 [Online]. Available: http:// www.cs.tut.fi/~gomezher/projects/eeg/aar.htm
29. F. Klostermann, V. Nikulin, A. Kuhn, F. Marzinzik, M. Wahl, A. Pogosyan, A. Kupsch, G. Schneider, P. Brown, and G. Curio, "Task-related differential dynamics of EEG alpha-and beta-band synchronization in cortico-basal motor structures," Eur. J. Neurosci., vol. 25, no. 5, pp. 1604-1615, 2007.
30. G. Tropini, J. Chiang, Z. J.Wang, E. Ty, and M. J. McKeown, "Altered directional connectivity in Parkinson's disease during performance of a visually guided task," NeuroImage, 2011, In Press.
31. P.Wang, C. Hung, S. Kwan, S. Teng, and B. Soong, "Early detection of periodic sharpave complexes on EEG by independent component analysis in patients with Creutzfeldt-Jakob disease," J. Clin. Neurophysiol., vol. 25, no. 1, pp. 25-31, 2008.
32. M. Rivlin-Etzion, O. Marmor, G. Heimer, A. Raz, A. Nini, and H. Bergman, "Basal ganglia oscillations and pathophysiology of movement disorders," Current Opin. Neurobiol., vol. 16, no. 6, pp. 629-637, 2006.
33. P. Silberstein, A. Pogosyan, A. Kuhn, G. Hotton, S. Tisch, A. Kupsch, P. Dowsey-Limousin, M. Hariz, and P. Brown, "Cortico-cortical coupling in Parkinson's disease and its modulation by therapy," Brain, vol. 128, no. 6, pp. 1277-1291, 2005.
34. T. Jung, S. Makeig, M. McKeown, A. Bell, T. Lee, and T. Sejnowski, "Imaging brain dynamics using independent component analysis," Proc. IEEE, vol. 89, no. 7, pp. 1107-1122, 2001.
35. R. Vigário, J. Sarela, V. Jousmiki, M. Hamalainen, and E. Oja, "Independent component approach to the analysis of EEG and MEG recordings," IEEE Trans. Biomed. Eng., vol. 47, no. 5, pp. 589-593, 2000.
36. S. Makeig, M. Westerfield, T. Jung, S. Enghoff, J. Townsend, E. Courchesne, and T. Sejnowski, "Dynamic brain sources of visual evoked responses," Science, vol. 295, no. 5555, pp. 690-694, 2002.