메뉴 건너뛰기




Volumn 6, Issue 1, 2012, Pages 158-170

Community genomic analysis of an extremely acidophilic sulfur-oxidizing biofilm

Author keywords

Acidimicrobium; Acidithiobacillus; acidophile; metagenomics; pyrosequencing; Thermoplasmatales

Indexed keywords

NITROGEN; SULFUR;

EID: 84355162257     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2011.75     Document Type: Article
Times cited : (153)

References (73)
  • 1
    • 19044401068 scopus 로고    scopus 로고
    • Community genomics in microbial ecology and evolution
    • DOI 10.1038/nrmicro1157
    • Allen E, Banfield J. (2005). Community genomics in microbial ecology and evolution. Nat Rev Microbiol 3: 489-498. (Pubitemid 40716175)
    • (2005) Nature Reviews Microbiology , vol.3 , Issue.6 , pp. 489-498
    • Allen, E.E.1    Banfield, J.F.2
  • 3
    • 34047264809 scopus 로고    scopus 로고
    • Life in acid: pH homeostasis in acidophiles
    • DOI 10.1016/j.tim.2007.02.005, PII S0966842X0700025X
    • Baker-Austin C, Dopson M. (2007). Life in acid: pH homeostasis in acidophiles. Trends Microbiol 15:165-171. (Pubitemid 46546467)
    • (2007) Trends in Microbiology , vol.15 , Issue.4 , pp. 165-171
    • Baker-Austin, C.1    Dopson, M.2
  • 4
    • 20444405643 scopus 로고    scopus 로고
    • Identification of a gene cluster for the formation of extracellular polysaccharide precursors in the chemolithoautotroph Acidithiobacillus ferrooxidans
    • DOI 10.1128/AEM.71.6.2902-2909.2005
    • Barreto M, Jedlicki E, Holmes D. (2005). Identification of a gene cluster for the formation of extracellular polysaccharide precursors in the chemolithoautotroph Acidithiobacillus ferrooxidans. Appl Environ Microbiol 71: 2902-2909. (Pubitemid 40807193)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.6 , pp. 2902-2909
    • Barreto, M.1    Jedlicki, E.2    Holmes, D.S.3
  • 5
    • 48749117805 scopus 로고    scopus 로고
    • Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment
    • Biddle J, Fitz-Gibbon S, Schuster S, Brenchley J, House C. (2008). Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment. Proc Natl Acad Sci USA 105: 10583-10588.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 10583-10588
    • Biddle, J.1    Fitz-Gibbon, S.2    Schuster, S.3    Brenchley, J.4    House, C.5
  • 6
    • 0033831747 scopus 로고    scopus 로고
    • Phylogeny of microorganisms populating a thick, subaerial, predominantly lithotrophic biofilm at an extreme acid mine drainage site
    • Bond P, Smriga S, Banfield J. (2000). Phylogeny of microorganisms populating a thick, subaerial, predominantly lithotrophic biofilm at an extreme acid mine drainage site. Appl Environ Microbiol 66: 3842-3849.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 3842-3849
    • Bond, P.1    Smriga, S.2    Banfield, J.3
  • 7
    • 9144223171 scopus 로고    scopus 로고
    • Nitrate reduction and the nitrogen cycle in archaea
    • DOI 10.1099/mic.0.27303-0
    • Cabello P, Roldán M, Moreno-Vivián C. (2004). Nitrate reduction and the nitrogen cycle in archaea. Microbiology 150: 3527-3546. (Pubitemid 39545304)
    • (2004) Microbiology , vol.150 , Issue.11 , pp. 3527-3546
    • Cabello, P.1    Roldan, M.D.2    Moreno-Vivian, C.3
  • 9
    • 63449095472 scopus 로고    scopus 로고
    • Functional analysis of three sulfide: Quinone oxidoreductase homologs in Chlorobaculum tepidum
    • Chan L, Morgan-Kiss R, Hanson T. (2009). Functional analysis of three sulfide: quinone oxidoreductase homologs in Chlorobaculum tepidum. J Bacteriol 191: 1026-1034.
    • (2009) J Bacteriol , vol.191 , pp. 1026-1034
    • Chan, L.1    Morgan-Kiss, R.2    Hanson, T.3
  • 10
    • 33847168962 scopus 로고    scopus 로고
    • Novel bacterial sulfur oxygenase reductases from bioreactors treating gold-bearing concentrates
    • DOI 10.1007/s00253-006-0691-0
    • Chen Z, Liu Y, Wu J, She Q, Jiang C, Liu S. (2007). Novel bacterial sulfur oxygenase reductases from bioreactors treating gold-bearing concentrates. Appl Microbiol Biotechnol 74: 688-698. (Pubitemid 46294998)
    • (2007) Applied Microbiology and Biotechnology , vol.74 , Issue.3 , pp. 688-698
    • Chen, Z.-W.1    Liu, Y.-Y.2    Wu, J.-F.3    She, Q.4    Jiang, C.-Y.5    Liu, S.-J.6
  • 11
    • 33644700003 scopus 로고    scopus 로고
    • Toward automatic reconstruction of a highly resolved tree of life
    • DOI 10.1126/science.1123061
    • Ciccarelli F, Doerks T, Von Mering C, Creevey C, Snel B, Bork P. (2006). Toward automatic reconstruction of a highly resolved tree of life. Science 311: 1283-1287. (Pubitemid 43334717)
    • (2006) Science , vol.311 , Issue.5765 , pp. 1283-1287
    • Ciccarelli, F.D.1    Doerks, T.2    Von Mering, C.3    Creevey, C.J.4    Snel, B.5    Bork, P.6
  • 12
    • 0029988467 scopus 로고    scopus 로고
    • Acidimicrobium ferrooxidans gen. nov., sp. nov.: Mixed-culture ferrous iron oxidation with Sulfobacillus species
    • Clark D, Norris P. (1996). Acidimicrobium ferrooxidans gen. nov., sp. nov.: mixed-culture ferrous iron oxidation with Sulfobacillus species. Microbiology 142: 785-790.
    • (1996) Microbiology , vol.142 , pp. 785-790
    • Clark, D.1    Norris, P.2
  • 13
    • 34447543124 scopus 로고    scopus 로고
    • A novel Acidimicrobium species in continuous cultures of moderately thermophilic, mineral-sulfide-oxidizing acidophiles
    • DOI 10.1128/AEM.02658-06
    • Cleaver A, Burton N, Norris P. (2007). A novel Acidimicrobium species in continuous cultures of moderately thermophilic, mineral-sulfide-oxidizing acidophiles. Appl Environ Microbiol 73: 4294-4299. (Pubitemid 47068170)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.13 , pp. 4294-4299
    • Cleaver, A.A.1    Burton, N.P.2    Norris, P.R.3
  • 15
    • 0018381106 scopus 로고
    • Transmembrane electrical potential and transmembrane pH gradient in the acidophile Thiobacillus ferro-oxidans
    • Cox JC, Nicholls DG, Ingledew WJ. (1979). Transmembrane electrical potential and transmembrane pH gradient in the acidophile Thiobacillus ferro-oxidans. Biochem J 178: 195-200. (Pubitemid 9127596)
    • (1979) Biochemical Journal , vol.178 , Issue.1 , pp. 195-200
    • Cox, J.C.1    Nicholls, D.G.2    Ingledew, W.J.3
  • 16
    • 0034443286 scopus 로고    scopus 로고
    • Microbial biofilms: From ecology to molecular genetics
    • DOI 10.1128/MMBR.64.4.847-867.2000
    • Davey M, O'toole G. (2000). Microbial biofilms: from ecology to molecular genetics. Microbiol Mol Biol Rev 64: 847-867. (Pubitemid 32475933)
    • (2000) Microbiology and Molecular Biology Reviews , vol.64 , Issue.4 , pp. 847-867
    • Davey, M.E.1    O'Toole, G.A.2
  • 17
    • 0026755238 scopus 로고
    • Archaea in coastal marine environments
    • DeLong E. (1992). Archaea in coastal marine environments. Proc Natl Acad Sci USA 89: 5685-5689.
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 5685-5689
    • Delong, E.1
  • 22
    • 33750061622 scopus 로고    scopus 로고
    • Whole-genome reciprocal BLAST analysis reveals that Planctomycetes do not share an unusually large number of genes with Eukarya and Archaea
    • Fuchsman C, Rocap G. (2006). Whole-genome reciprocal BLAST analysis reveals that Planctomycetes do not share an unusually large number of genes with Eukarya and Archaea. Appl Environ Microbiol 72: 6841-6884.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 6841-6884
    • Fuchsman, C.1    Rocap, G.2
  • 23
    • 0142135971 scopus 로고    scopus 로고
    • Gypsum deposits in the Frasassi Caves, Central Italy
    • Galdenzi S, Maruoka T. (2003). Gypsum deposits in the Frasassi Caves, central Italy. J Cave KarstStud65: 111-125. (Pubitemid 37269236)
    • (2003) Journal of Cave and Karst Studies , vol.65 , Issue.2 , pp. 111-125
    • Galdenzi, S.1    Maruoka, T.2
  • 24
    • 0010494571 scopus 로고    scopus 로고
    • Biological sulfide oxidation: Sulfide-quinone reductase (SQR), the primary reaction
    • Pandalai SG (ed Research Signpost: Trivadrum, India
    • Griesbeck C, Hauska G, Schütz M. (2000). Biological sulfide oxidation: sulfide-quinone reductase (SQR), the primary reaction. In: Pandalai SG (ed) Recent Research Developments in Microbiology. Research Signpost: Trivadrum, India, pp 179-203.
    • (2000) Recent Research Developments in Microbiology , pp. 179-203
    • Griesbeck, C.1    Hauska, G.2    Schütz, M.3
  • 25
    • 0036786144 scopus 로고    scopus 로고
    • Mechanism of sulfidequinone reductase investigated using site-directed mutagenesis and sulfur analysis
    • Griesbeck C, Schütz M, Schödl T, Bathe S, Nausch L, Mederer N et al. (2002). Mechanism of sulfidequinone reductase investigated using site-directed mutagenesis and sulfur analysis. Biochemistry 41: 11552-11565.
    • (2002) Biochemistry , vol.41 , pp. 11552-11565
    • Griesbeck, C.1    Schütz, M.2    Schödl, T.3    Bathe, S.4    Nausch, L.5    Mederer, N.6
  • 26
    • 33749989029 scopus 로고    scopus 로고
    • Thiosulphate oxidation in the phototrophic sulphur bacterium Allochromatium vinosum
    • DOI 10.1111/j.1365-2958.2006.05408.x
    • Hensen D, Sperling D, Trüper H, Brune D, Dahl C. (2006). Thiosulphate oxidation in the phototrophic sulphur bacterium Allochromatium vinosum. Mol Microbiol 62: 794-810. (Pubitemid 44571603)
    • (2006) Molecular Microbiology , vol.62 , Issue.3 , pp. 794-810
    • Hensen, D.1    Sperling, D.2    Truper, H.G.3    Brune, D.C.4    Dahl, C.5
  • 27
    • 0034067644 scopus 로고    scopus 로고
    • Analysis of intact tetraether lipids in archaeal cell material and sediments by high performance liquid chromatography/atmospheric pressure chemical ionization mass spectrometry
    • DOI 10.1002/(SICI)1097-0231(20000415)14:7<585::AID-RCM913>3.0.CO;2- N
    • Hopmans E, Schouten S, Pancost R, van der Meer M, Damstè J. (2000). Analysis of intact tetraether lipids in archaeal cell material and sediments by high performance liquid chromatography/atmospheric pressure chemical ionization mass spectrometry. Rapid Commun Mass Spec 14: 585-589. (Pubitemid 30170360)
    • (2000) Rapid Communications in Mass Spectrometry , vol.14 , Issue.7 , pp. 585-589
    • Hopmans, E.C.1    Schouten, S.2    Pancost, R.D.3    Van Der Meer, M.T.J.4    Damste, J.S.5
  • 29
    • 33847702910 scopus 로고    scopus 로고
    • MEGAN analysis of metagenomic data
    • DOI 10.1101/gr.5969107
    • Huson D, Auch A, Qi J, Schuster S. (2007). MEGAN analysis of metagenomic data. Genome Res 17: 377-386. (Pubitemid 46376747)
    • (2007) Genome Research , vol.17 , Issue.3 , pp. 377-386
    • Huson, D.H.1    Auch, A.F.2    Qi, J.3    Schuster, S.C.4
  • 30
    • 78149423315 scopus 로고    scopus 로고
    • Metagenomes from hightemperature chemotrophic systems reveal geochemical controls on microbial community structure and function
    • Inskeep W, Rusch D, Jay Z, Herrgard M, Kozubal M, Richardson T et al. (2010). Metagenomes from hightemperature chemotrophic systems reveal geochemical controls on microbial community structure and function. PLoS One 5: e9773.
    • (2010) PLoS One , vol.5
    • Inskeep, W.1    Rusch, D.2    Jay, Z.3    Herrgard, M.4    Kozubal, M.5    Richardson, T.6
  • 31
    • 67649808144 scopus 로고    scopus 로고
    • Ferrimicrobium acidiphilum gen. nov., sp. nov. and Ferrithrix thermotolerans gen. nov., sp. nov.: Heterotrophic, iron-oxidizing, extremely acidophilic Actinobacteria
    • Johnson D, Bacelar-Nicolau P, Okibe N, Thomas A, Hallberg K. (2009). Ferrimicrobium acidiphilum gen. nov., sp. nov. and Ferrithrix thermotolerans gen. nov., sp. nov.: heterotrophic, iron-oxidizing, extremely acidophilic Actinobacteria. Int J Syst Evol Microbiol 59: 1082.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 1082
    • Johnson, D.1    Bacelar-Nicolau, P.2    Okibe, N.3    Thomas, A.4    Hallberg, K.5
  • 32
    • 0141741231 scopus 로고    scopus 로고
    • The microbiology of acidic mine waters
    • DOI 10.1016/S0923-2508(03)00114-1
    • Johnson D, Hallberg K. (2003). The microbiology of acidic mine waters. Res Microbiol 154: 466-473. (Pubitemid 37130248)
    • (2003) Research in Microbiology , vol.154 , Issue.7 , pp. 466-473
    • Johnson, D.B.1    Hallberg, K.B.2
  • 33
    • 63049112114 scopus 로고    scopus 로고
    • Geomicrobiology of biovermiculations from the Frasassi cave system, Italy
    • Jones D, Lyon E, Macalady J. (2008). Geomicrobiology of biovermiculations from the Frasassi cave system, Italy. J Cave Karst Stud 70: 78-93.
    • (2008) J Cave Karst Stud , vol.70 , pp. 78-93
    • Jones, D.1    Lyon, E.2    MacAlady, J.3
  • 34
    • 34848865047 scopus 로고    scopus 로고
    • Identification of a gene encoding a tetrathionate hydrolase in Acidithiobacillus ferrooxidans
    • DOI 10.1016/j.jbiotec.2007.08.030, PII S0168165607014964
    • Kanao T, Kamimura K, Sugio T. (2007). Identification of a gene encoding a tetrathionate hydrolase in Acidithiobacillus ferrooxidans. J Biotechnol 132: 16-22. (Pubitemid 47503385)
    • (2007) Journal of Biotechnology , vol.132 , Issue.1 , pp. 16-22
    • Kanao, T.1    Kamimura, K.2    Sugio, T.3
  • 35
    • 33846641846 scopus 로고    scopus 로고
    • General characteristics and important model organisms
    • Cavicchioli R (ed ASM Press: Washington DC
    • Kletzin A. (2007). General characteristics and important model organisms. In: Cavicchioli R (ed). Archaea: Molecular and Cellular Biology. ASM Press: Washington DC, pp 14-92.
    • (2007) Archaea: Molecular and Cellular Biology , pp. 14-92
    • Kletzin, A.1
  • 36
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • Stackebrandt E, Goodfellow M (eds Wiley: New York
    • Lane DJ. (1991). 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds). Nucleic Acid Techniques in Bacterial Systematics.Wiley: New York, pp 115-175.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 38
    • 58049183225 scopus 로고    scopus 로고
    • Comparative genomic analysis of carbon and nitrogen assimilation mechanisms in three indigenous bioleaching bacteria: Predictions and validations
    • Levicán G, Ugalde J, Ehrenfeld N, Maass A, Parada P. (2008). Comparative genomic analysis of carbon and nitrogen assimilation mechanisms in three indigenous bioleaching bacteria: predictions and validations. BMC Genomics 9: 581-600.
    • (2008) BMC Genomics , vol.9 , pp. 581-600
    • Levicán, G.1    Ugalde, J.2    Ehrenfeld, N.3    Maass, A.4    Parada, P.5
  • 39
    • 8744242152 scopus 로고    scopus 로고
    • Tetraether-linked membrane monolayers in Ferroplasma spp: A key to survival in acid
    • DOI 10.1007/s00792-004-0404-5
    • Macalady J, Vestling M, Baumler D, Boekelheide N, Kaspar C, Banfield J. (2004). Tetraether-linked membrane monolayers in Ferroplasma spp: a key to survival in acid. Extremophiles 8: 411-419. (Pubitemid 39520729)
    • (2004) Extremophiles , vol.8 , Issue.5 , pp. 411-419
    • Macalady, J.L.1    Vestling, M.M.2    Baumler, D.3    Boekelheide, N.4    Kaspar, C.W.5    Banfield, J.F.6
  • 40
    • 44849139426 scopus 로고    scopus 로고
    • Niche differentiation among sulfur-oxidizing bacterial populations in cave waters
    • DOI 10.1038/ismej.2008.25, PII ISMEJ200825
    • Macalady JL, Dattagupta S, Schaperdoth I, Jones DS, Druschel GK, Eastman D. (2008). Niche differentiation among sulfur-oxidizing bacterial populations in cave waters. ISME J 2: 590-601. (Pubitemid 351793246)
    • (2008) ISME Journal , vol.2 , Issue.6 , pp. 590-601
    • Macalady, J.L.1    Dattagupta, S.2    Schaperdoth, I.3    Jones, D.S.4    Druschel, G.K.5    Eastman, D.6
  • 41
    • 34247233535 scopus 로고    scopus 로고
    • Extremely acidic, pendulous cave wall biofilms from the Frasassi cave system, Italy
    • DOI 10.1111/j.1462-2920.2007.01256.x
    • Macalady JL, Jones DS, Lyon EH. (2007). Extremely acidic, pendulous microbial biofilms from the Frasassi cave system, Italy. Environ Microbiol 9: 1402-1414. (Pubitemid 46763519)
    • (2007) Environmental Microbiology , vol.9 , Issue.6 , pp. 1402-1414
    • Macalady, J.L.1    Jones, D.S.2    Lyon, E.H.3
  • 43
    • 65649121899 scopus 로고    scopus 로고
    • The roles of the nitrate reductase NarGHJI, the nitrite reductase NirBD and the response regulator GlnR in nitrate assimilation of Mycobacterium tuberculosis
    • Malm S, Tiffert Y, Micklinghoff J, Schultze S, Joost I, Weber I et al. (2009). The roles of the nitrate reductase NarGHJI, the nitrite reductase NirBD and the response regulator GlnR in nitrate assimilation of Mycobacterium tuberculosis. Microbiology 155: 1332-1339.
    • (2009) Microbiology , vol.155 , pp. 1332-1339
    • Malm, S.1    Tiffert, Y.2    Micklinghoff, J.3    Schultze, S.4    Joost, I.5    Weber, I.6
  • 46
    • 4344594427 scopus 로고    scopus 로고
    • Coupling of the pathway of sulphur oxidation to dioxygen reduction: Characterization of a novel membrane-bound thiosulphate:quinone oxidoreductase
    • DOI 10.1111/j.1365-2958.2004.04193.x
    • Müller F, Bandeiras T, Urich T, Teixeira M, Gomes C, Kletzin A. (2004). Coupling of the pathway of sulphur oxidation to dioxygen reduction: characterization of a novel membrane-bound thiosulphate: quinone oxidoreductase. Mol Microbiol 53: 1147-1160. (Pubitemid 39120436)
    • (2004) Molecular Microbiology , vol.53 , Issue.4 , pp. 1147-1160
    • Muller, F.H.1    Bandeiras, T.M.2    Urich, T.3    Teixeira, M.4    Gomes, C.M.5    Kletzin, A.6
  • 47
    • 33846911999 scopus 로고    scopus 로고
    • Succession of sulfur-oxidizing bacteria in the microbial community on corroding concrete in sewer systems
    • DOI 10.1128/AEM.02054-06
    • Okabe S, Odagiri M, Ito T, Satoh H. (2007). Succession of sulfur-oxidizing bacteria in the microbial community on corroding concrete in sewer systems. Appl Environ Microbiol 73: 971-980. (Pubitemid 46233517)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.3 , pp. 971-980
    • Okabe, S.1    Odagiri, M.2    Ito, T.3    Satoh, H.4
  • 48
    • 65349189508 scopus 로고    scopus 로고
    • Diversity of hopanoids and squalenehopene cyclases across a tropical land-sea gradient
    • Pearson A, Leavitt W, Sáenz J, Summons R, Tam M, Close H. (2009). Diversity of hopanoids and squalenehopene cyclases across a tropical land-sea gradient. Environ Microbiol 11: 1208-1223.
    • (2009) Environ Microbiol , vol.11 , pp. 1208-1223
    • Pearson, A.1    Leavitt, W.2    Sáenz, J.3    Summons, R.4    Tam, M.5    Close, H.6
  • 50
    • 0031855745 scopus 로고    scopus 로고
    • Sirohaem sulfite reductase and other proteins encoded by genes at the dsr locus of Chromatium vinosum are involved in the oxidation of intracellular sulfur
    • Pott A, Dahl C. (1998). Sirohaem sulfite reductase and other proteins encoded by genes at the dsr locus of Chromatium vinosum are involved in the oxidation of intracellular sulfur. Microbiology 144: 1881-1894. (Pubitemid 28372020)
    • (1998) Microbiology , vol.144 , Issue.7 , pp. 1881-1894
    • Pott, A.S.1    Dahl, C.2
  • 51
    • 77950251400 scopus 로고    scopus 로고
    • A human gut microbial gene catalogue established by metagenomic sequencing
    • Qin J, Li R, Raes J, Arumugam M, Burgdorf K, Manichanh C et al. (2010). A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464: 59-65.
    • (2010) Nature , vol.464 , pp. 59-65
    • Qin, J.1    Li, R.2    Raes, J.3    Arumugam, M.4    Burgdorf, K.5    Manichanh, C.6
  • 52
  • 53
    • 0346494926 scopus 로고    scopus 로고
    • TransportDB: A relational database of cellular membrane transport systems
    • Ren Q, Kang K, Paulsen I. (2004). TransportDB: a relational database of cellular membrane transport systems. Nucleic Acids Res 32: D284-D288. (Pubitemid 38081658)
    • (2004) Nucleic Acids Research , vol.32 , Issue.DATABASE ISS.
    • Ren, Q.1    Kang, K.H.2    Paulsen, I.T.3
  • 55
    • 34547434227 scopus 로고    scopus 로고
    • Oxidation of inorganic sulfur compounds in acidophilic prokaryotes
    • DOI 10.1002/elsc.200720204
    • Rohwerder T, Sand W. (2007). Oxidation of inorganic sulfur compounds in acidophilic prokaryotes. Eng Life Sci 7: 301-309. (Pubitemid 47162076)
    • (2007) Engineering in Life Sciences , vol.7 , Issue.4 , pp. 301-309
    • Rohwerder, T.1    Sand, W.2
  • 56
    • 0035816460 scopus 로고    scopus 로고
    • Asn amidotransferase is involved in decoding glutamine and asparagine codons in Acidithiobacillus ferrooxidans
    • DOI 10.1016/S0014-5793(01)02600-X, PII S001457930102600X
    • Salazar J, Zúñ iga R, Raczniak G, Becker H, Söll D, Orellana O. (2001). A dual-specific Glu-tRNAGln and Asp-tRNAAsn amidotransferase is involved in decoding glutamine and asparagine codons in Acidithiobacillus ferrooxidans. FEBS Lett 500: 129-131. (Pubitemid 32607546)
    • (2001) FEBS Letters , vol.500 , Issue.3 , pp. 129-131
    • Salazar, J.C.1    Zuiga, R.2    Raczniak, G.3    Becker, H.4    Soll, D.5    Orellana, O.6
  • 57
    • 34548183302 scopus 로고    scopus 로고
    • The SoxYZ complex carries sulfur cycle intermediates on a peptide swinging arm
    • DOI 10.1074/jbc.M701602200
    • Sauvé V, Bruno S, Berks B, Hemmings A. (2007). The SoxYZ complex carries sulfur cycle intermediates on a peptide swinging arm. J Biol Chem 282: 23194-23204. (Pubitemid 47311913)
    • (2007) Journal of Biological Chemistry , vol.282 , Issue.32 , pp. 23194-23204
    • Sauve, V.1    Bruno, S.2    Berks, B.C.3    Hemmings, A.M.4
  • 58
    • 0028806517 scopus 로고
    • Picrophilus gen. nov., fam. nov.: A novel aerobic, heterotrophic, thermoacidophilic genus and family comprising archaea capable of growth around pH 0
    • Schleper C, Puehler G, Holz I, Gambacorta A, Janekovic D, Santarius U et al. (1995). Picrophilus gen. nov., fam. nov.: a novel aerobic, heterotrophic, thermoacidophilic genus and family comprising archaea capable of growth around pH 0. J Bacteriol 177: 7050-7059.
    • (1995) J Bacteriol , vol.177 , pp. 7050-7059
    • Schleper, C.1    Puehler, G.2    Holz, I.3    Gambacorta, A.4    Janekovic, D.5    Santarius, U.6
  • 59
    • 0031752797 scopus 로고    scopus 로고
    • Something from almost nothing: Carbon dioxide fixation in chemoautotrophs
    • DOI 10.1146/annurev.micro.52.1.191
    • Shively J, Van Keulen G, MeijerW. (1998). Something from almost nothing: carbon dioxide fixation in chemoautotrophs. Annu Rev Microbiol 52: 191-230. (Pubitemid 28481192)
    • (1998) Annual Review of Microbiology , vol.52 , pp. 191-230
    • Shively, J.M.1    Van Keulen, G.2    Meijer, W.G.3
  • 60
    • 84355160936 scopus 로고    scopus 로고
    • Nitrogen isotope evidence of ammonia vapor assimilation by cave wall microbial biofilms in a sulfidic cave, a novel mechanism of nutrient acquisition
    • Stern L, Engel A, Bennett P. (2003). Nitrogen isotope evidence of ammonia vapor assimilation by cave wall microbial biofilms in a sulfidic cave, a novel mechanism of nutrient acquisition. AGU Fall Meeting Abstracts 84: B42E-B405.
    • (2003) AGU Fall Meeting Abstracts , vol.84
    • Stern, L.1    Engel, A.2    Bennett, P.3
  • 61
    • 0345505746 scopus 로고    scopus 로고
    • Atmospheric pressure chemical ionisation reversed-phase liquid chromatography/ion trap mass spectrometry of intact bacteriohopanepolyols
    • DOI 10.1002/rcm.974
    • Talbot H, Squier A, Keely B, Farrimond P. (2003). Atmospheric pressure chemical ionisation reversed-phase liquid chromatography/ion trap mass spectrometry of intact bacteriohopanepolyols. Rapid Commun Mass Spec 17: 728-737. (Pubitemid 36373175)
    • (2003) Rapid Communications in Mass Spectrometry , vol.17 , Issue.7 , pp. 728-737
    • Talbot, H.M.1    Squier, A.H.2    Keely, B.J.3    Farrimond, P.4
  • 63
    • 41149093627 scopus 로고    scopus 로고
    • Uncultured archaea in deep marine subsurface sediments: Have we caught them all?
    • DOI 10.1038/ismej.2007.90, PII ISMEJ200790
    • Teske A, Sørensen K. (2007). Uncultured archaea in deep marine subsurface sediments: have we caught them all? ISME J 2: 3-18. (Pubitemid 351612350)
    • (2008) ISME Journal , vol.2 , Issue.1 , pp. 3-18
    • Teske, A.1    Sorensen, K.B.2
  • 65
    • 58249113952 scopus 로고    scopus 로고
    • Acidithiobacillus ferrooxidans metabolism: From genome sequence to industrial applications
    • Valdés J, Pedroso I, Quatrini R, Dodson R, Tettelin H, Blake R et al. (2008a). Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications. BMC Genomics 9: 597.
    • (2008) BMC Genomics , vol.9 , pp. 597
    • Valdés, J.1    Pedroso, I.2    Quatrini, R.3    Dodson, R.4    Tettelin, H.5    Blake, R.6
  • 66
    • 53249090240 scopus 로고    scopus 로고
    • Comparative genome analysis of Acidithiobacillus ferrooxidans, A. thiooxidans and A. caldus: Insights into their metabolism and ecophysiology
    • Valdés J, Pedroso I, Quatrini R, Holmes D. (2008b). Comparative genome analysis of Acidithiobacillus ferrooxidans, A. thiooxidans and A. caldus: insights into their metabolism and ecophysiology. Hydrometallurgy 94: 180-184.
    • (2008) Hydrometallurgy , vol.94 , pp. 180-184
    • Valdés, J.1    Pedroso, I.2    Quatrini, R.3    Holmes, D.4
  • 67
    • 69949088339 scopus 로고    scopus 로고
    • Draft genome sequence of the extremely acidophilic bacterium Acidithiobacillus caldus ATCC 51756 reveals metabolic versatility in the genus Acidithiobacillus
    • Valdés J, Quatrini R, Hallberg K, Dopson M, Valenzuela P, Holmes D. (2009). Draft genome sequence of the extremely acidophilic bacterium Acidithiobacillus caldus ATCC 51756 reveals metabolic versatility in the genus Acidithiobacillus. J Bacteriol 191: 5877-5878.
    • (2009) J Bacteriol , vol.191 , pp. 5877-5878
    • Valdés, J.1    Quatrini, R.2    Hallberg, K.3    Dopson, M.4    Valenzuela, P.5    Holmes, D.6
  • 68
    • 0032142866 scopus 로고    scopus 로고
    • The essence of being extremophilic: The role of the unique archaeal membrane lipids
    • DOI 10.1007/s007920050056
    • Van De Vossenberg J, Driessen A, Konings W. (1998). The essence of being extremophilic: the role of the unique archaeal membrane lipids. Extremophiles 2: 163-170. (Pubitemid 28407995)
    • (1998) Extremophiles , vol.2 , Issue.3 , pp. 163-170
    • Van De Vossenberg, J.L.C.M.1    Driessen, A.J.M.2    Konings, W.N.3
  • 69
    • 67649174178 scopus 로고    scopus 로고
    • Abundance and diversity of CO2-fixing bacteria in grassland soils close to natural carbon dioxide springs
    • Videmsek U, Hagn A, Suhadolc M, Radl V, Knicker H, Schloter M et al. (2009). Abundance and diversity of CO2-fixing bacteria in grassland soils close to natural carbon dioxide springs. Microb Ecol 58: 1-9.
    • (2009) Microb Ecol , vol.58 , pp. 1-9
    • Videmsek, U.1    Hagn, A.2    Suhadolc, M.3    Radl, V.4    Knicker, H.5    Schloter, M.6
  • 70
    • 0034177871 scopus 로고    scopus 로고
    • Acidic cave-wall biofilms located in the Frasassi Gorge, Italy
    • Vlasceanu L, Sarbu SM, Engel AS, Kinkle BK. (2000). Acidic cave wall biofilms located in the Frasassi Gorge, Italy. Geomicrobiol J 17: 125-139. (Pubitemid 30369365)
    • (2000) Geomicrobiology Journal , vol.17 , Issue.2 , pp. 125-139
    • Vlasceanu, L.1    Sarbu, S.M.2    Engel, A.S.3    Kinkle, B.K.4
  • 71
    • 13544251604 scopus 로고    scopus 로고
    • Purification and characterization of sulfide: Quinone oxidoreductase from an acidophilic iron-oxidizing bacterium, Acidithiobacillus ferrooxidans
    • Wakai S, Tsujita M, Kikumoto M, Manchur M, Kanao T, Kamimura K. (2007). Purification and characterization of sulfide: quinone oxidoreductase from an acidophilic iron-oxidizing bacterium, Acidithiobacillus ferrooxidans. Biosci, Biotechnol, Biochem 68: 2519-2528.
    • (2007) Biosci, Biotechnol, Biochem , vol.68 , pp. 2519-2528
    • Wakai, S.1    Tsujita, M.2    Kikumoto, M.3    Manchur, M.4    Kanao, T.5    Kamimura, K.6
  • 72
    • 70349088644 scopus 로고    scopus 로고
    • Hopanoids play a role in membrane integrity and pH homeostasis in Rhodopseudomonas palustris TIE-1
    • Welander P, Hunter R, Zhang L, Sessions A, Summons R, Newman D. (2009). Hopanoids play a role in membrane integrity and pH homeostasis in Rhodopseudomonas palustris TIE-1. J Bacteriol 191: 6145-6156.
    • (2009) J Bacteriol , vol.191 , pp. 6145-6156
    • Welander, P.1    Hunter, R.2    Zhang, L.3    Sessions, A.4    Summons, R.5    Newman, D.6
  • 73
    • 33747160474 scopus 로고    scopus 로고
    • Population genomics in natural microbial communities
    • DOI 10.1016/j.tree.2006.07.001, PII S0169534706002102
    • Whitaker R, Banfield J. (2006). Population genomics in natural microbial communities. Trends Ecol Evol 21: 508-516. (Pubitemid 44233961)
    • (2006) Trends in Ecology and Evolution , vol.21 , Issue.9 , pp. 508-516
    • Whitaker, R.J.1    Banfield, J.F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.