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Volumn 44, Issue 12, 2011, Pages 1359-1368

Flexizymes: Their evolutionary history and the origin of catalytic function

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID TRANSFER RNA LIGASE; RIBOZYME; TRANSFER RNA;

EID: 84255189091     PISSN: 00014842     EISSN: 15204898     Source Type: Journal    
DOI: 10.1021/ar2000953     Document Type: Article
Times cited : (80)

References (33)
  • 3
    • 0031882441 scopus 로고    scopus 로고
    • A novel ribozyme with ester transferase activity
    • Jenne, A.; Famulok, M. A novel ribozyme with ester transferase activity Chem. Biol. 1998, 5, 23-34 (Pubitemid 28084589)
    • (1998) Chemistry and Biology , vol.5 , Issue.1 , pp. 23-34
    • Jenne, A.1    Famulok, M.2
  • 4
    • 0029956108 scopus 로고    scopus 로고
    • Ribozyme-catalysed amino-acid transfer reactions
    • DOI 10.1038/381442a0
    • Lohse, P. A.; Szostak, J. W. Ribozyme-catalysed amino-acid transfer reactions Nature 1996, 381, 442-444 (Pubitemid 26162736)
    • (1996) Nature , vol.381 , Issue.6581 , pp. 442-444
    • Lohse, P.A.1    Szostak, J.W.2
  • 6
    • 0034957780 scopus 로고    scopus 로고
    • A minihelix-loop RNA acts as a trans-aminoacylation catalyst
    • DOI 10.1017/S1355838201010457
    • Lee, N.; Suga, H. A minihelix-loop RNA acts as a trans-aminoacylation catalyst RNA 2001, 7, 1043-1051 (Pubitemid 32612481)
    • (2001) RNA , vol.7 , Issue.7 , pp. 1043-1051
    • Lee, N.1    Suga, H.2
  • 7
    • 0035989650 scopus 로고    scopus 로고
    • A tRNA aminoacylation system for non-natural amino acids based on a programmable ribozyme
    • DOI 10.1038/nbt0702-723
    • Bessho, Y.; Hodgson, D. R.W.; Suga, H. A tRNA aminoacylation system for non-natural amino acids based on a programmable ribozyme Nat. Biotechnol. 2002, 20, 723-728 (Pubitemid 34734140)
    • (2002) Nature Biotechnology , vol.20 , Issue.7 , pp. 723-728
    • Bessho, Y.1    Hodgson, D.R.W.2    Suga, H.3
  • 8
    • 0035794690 scopus 로고    scopus 로고
    • An in vitro evolved precursor tRNA with aminoacylation activity
    • DOI 10.1093/emboj/20.7.1797
    • Saito, H.; Kourouklis, D.; Suga, H. An in vitro evolved precursor tRNA with aminoacylation activity EMBO J. 2001, 20, 1797-1806 (Pubitemid 32299415)
    • (2001) EMBO Journal , vol.20 , Issue.7 , pp. 1797-1806
    • Saito, H.1    Kourouklis, D.2    Suga, H.3
  • 9
    • 0035674323 scopus 로고    scopus 로고
    • Concurrent molecular recognition of the amino acid and tRNA by a ribozyme
    • Saito, H.; Watanabe, K.; Suga, H. Concurrent molecular recognition of the amino acid and tRNA by a ribozyme RNA 2001, 7, 1867-1878 (Pubitemid 34042299)
    • (2001) RNA , vol.7 , Issue.12 , pp. 1867-1878
    • Saito, H.1    Watanabe, K.2    Suga, H.3
  • 10
    • 0034838173 scopus 로고    scopus 로고
    • A ribozyme exclusively aminoacylates the 3′-hydroxyl group of the tRNA terminal adenosine [10]
    • DOI 10.1021/ja015756s
    • Saito, H.; Suga, H. A ribozyme exclusively aminoacylates the 3′-hydroxy group of the tRNA terminal adenosine J. Am. Chem. Soc. 2001, 123, 7178-7179 (Pubitemid 32879517)
    • (2001) Journal of the American Chemical Society , vol.123 , Issue.29 , pp. 7178-7179
    • Saito, H.1    Suga, H.2
  • 11
    • 0041629325 scopus 로고    scopus 로고
    • A versatile tRNA aminoacylation catalyst based on RNA
    • DOI 10.1016/S1074-5521(03)00145-5
    • Murakami, H.; Saito, H.; Suga, H. A versatile tRNA aminoacylation catalyst based on RNA Chem. Biol. 2003, 10, 655-662 (Pubitemid 36940942)
    • (2003) Chemistry and Biology , vol.10 , Issue.7 , pp. 655-662
    • Murakami, H.1    Saito, H.2    Suga, H.3
  • 12
    • 33646044708 scopus 로고    scopus 로고
    • A highly flexible tRNA acylation method for non-natural polypeptide synthesis
    • Murakami, H.; Ohta, A.; Ashigai, H.; Suga, H. A highly flexible tRNA acylation method for non-natural polypeptide synthesis Nat. Methods 2006, 3, 357-359
    • (2006) Nat. Methods , vol.3 , pp. 357-359
    • Murakami, H.1    Ohta, A.2    Ashigai, H.3    Suga, H.4
  • 13
    • 45749150319 scopus 로고    scopus 로고
    • Initiating translation with D-amino acids
    • DOI 10.1261/rna.1020708
    • Goto, Y.; Murakami, H.; Suga, H. Initiating translation with D-amino acids RNA 2008, 14, 1390-1398 (Pubitemid 351872195)
    • (2008) RNA , vol.14 , Issue.7 , pp. 1390-1398
    • Goto, Y.1    Murakami, H.2    Suga, H.3
  • 14
    • 38349027623 scopus 로고    scopus 로고
    • Reprogramming the translation initiation for the synthesis of physiologically stable cyclic peptides
    • DOI 10.1021/cb700233t
    • Goto, Y.; Ohta, A.; Sako, Y.; Yamagishi, Y.; Murakami, H.; Suga, H. Reprogramming the translation initiation for the synthesis of physiologically stable cyclic peptides ACS Chem. Biol. 2008, 3, 120-129 (Pubitemid 351419412)
    • (2008) ACS Chemical Biology , vol.3 , Issue.2 , pp. 120-129
    • Goto, Y.1    Ohta, A.2    Sako, Y.3    Yamagishi, Y.4    Murakami, H.5    Suga, H.6
  • 15
    • 38349062552 scopus 로고    scopus 로고
    • Messenger RNA-programmed incorporation of multiple N-methyl-amino acids into linear and cyclic peptides
    • Kawakami, T.; Murakami, H.; Suga, H. Messenger RNA-programmed incorporation of multiple N-methyl-amino acids into linear and cyclic peptides Chem. Biol. 2008, 15, 32-42
    • (2008) Chem. Biol. , vol.15 , pp. 32-42
    • Kawakami, T.1    Murakami, H.2    Suga, H.3
  • 16
    • 58049219079 scopus 로고    scopus 로고
    • Ribosomal synthesis of polypeptoids and peptoid-peptide hybrids
    • Kawakami, T.; Murakami, H.; Suga, H. Ribosomal synthesis of polypeptoids and peptoid-peptide hybrids J. Am. Chem. Soc. 2008, 130, 16861-16863
    • (2008) J. Am. Chem. Soc. , vol.130 , pp. 16861-16863
    • Kawakami, T.1    Murakami, H.2    Suga, H.3
  • 17
    • 37149000703 scopus 로고    scopus 로고
    • Synthesis of Polyester by Means of Genetic Code Reprogramming
    • DOI 10.1016/j.chembiol.2007.10.015, PII S1074552107003705
    • Ohta, A.; Murakami, H.; Higashimura, E.; Suga, H. Synthesis of polyester by means of genetic code reprogramming Chem. Biol. 2007, 14, 1315-1322 (Pubitemid 350257006)
    • (2007) Chemistry and Biology , vol.14 , Issue.12 , pp. 1315-1322
    • Ohta, A.1    Murakami, H.2    Higashimura, E.3    Suga, H.4
  • 18
    • 67649662135 scopus 로고    scopus 로고
    • A flexizyme that selectively charges amino acids activated by a water-friendly leaving group
    • Niwa, N.; Yamagishi, Y.; Murakami, H.; Suga, H. A flexizyme that selectively charges amino acids activated by a water-friendly leaving group Bioorg. Med. Chem. Lett. 2009, 19, 3892-3894
    • (2009) Bioorg. Med. Chem. Lett. , vol.19 , pp. 3892-3894
    • Niwa, N.1    Yamagishi, Y.2    Murakami, H.3    Suga, H.4
  • 19
    • 67849104927 scopus 로고    scopus 로고
    • Translation initiation with initiator tRNA charged with exotic peptides
    • Goto, Y.; Suga, H. Translation initiation with initiator tRNA charged with exotic peptides J. Am. Chem. Soc. 2009, 131, 5040-5041
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 5040-5041
    • Goto, Y.1    Suga, H.2
  • 20
    • 79955967162 scopus 로고    scopus 로고
    • Ribosomal synthesis of backbone-macrocyclic peptides containing γ-amino acids
    • Ohshiro, Y.; Nakajima, E.; Goto, Y.; Fuse, S.; Takahashi, T.; Doi, T.; Suga, H. Ribosomal synthesis of backbone-macrocyclic peptides containing γ-amino acids ChemBioChem 2011, 12, 1183-1187
    • (2011) ChemBioChem , vol.12 , pp. 1183-1187
    • Ohshiro, Y.1    Nakajima, E.2    Goto, Y.3    Fuse, S.4    Takahashi, T.5    Doi, T.6    Suga, H.7
  • 21
    • 79958158209 scopus 로고    scopus 로고
    • Flexizymes for genetic code reprogramming
    • Goto, Y.; Katoh, T.; Suga, H. Flexizymes for genetic code reprogramming Nat. Protoc. 2011, 6, 779-790
    • (2011) Nat. Protoc. , vol.6 , pp. 779-790
    • Goto, Y.1    Katoh, T.2    Suga, H.3
  • 22
    • 47549110353 scopus 로고    scopus 로고
    • Structural basis of specific tRNA aminoacylation by a small in vitro selected ribozyme
    • Xiao, H.; Murakami, H.; Suga, H.; Ferré-D'Amaré, A. R. Structural basis of specific tRNA aminoacylation by a small in vitro selected ribozyme Nature 2008, 454, 358-361
    • (2008) Nature , vol.454 , pp. 358-361
    • Xiao, H.1    Murakami, H.2    Suga, H.3    Ferré-D'Amaré, A.R.4
  • 23
    • 77957111493 scopus 로고    scopus 로고
    • Use of the spliceosomal protein U1A to facilitate crystallization and structure determination of complex RNAs
    • Ferré-D'Amaré, A. R. Use of the spliceosomal protein U1A to facilitate crystallization and structure determination of complex RNAs Methods 2010, 52, 159-167
    • (2010) Methods , vol.52 , pp. 159-167
    • Ferré-D'Amaré, A.R.1
  • 24
    • 0036930398 scopus 로고    scopus 로고
    • Outersphere and innersphere coordinated metal ions in an aminoacyl-tRNA synthetase ribozyme
    • DOI 10.1093/nar/gkf641
    • Saito, H.; Suga, H. Outersphere and innersphere coordinated metal ions in an aminoacyl-tRNA synthetase ribozyme Nucleic Acids Res. 2002, 30, 5151-5159 (Pubitemid 36033033)
    • (2002) Nucleic Acids Research , vol.30 , Issue.23 , pp. 5151-5159
    • Saito, H.1    Suga, H.2
  • 27
    • 67650507286 scopus 로고    scopus 로고
    • Ribosomal synthesis of peptides with C-terminal lactams, thiolactones, and alkylamides
    • Nakajima, E.; Goto, Y.; Sako, Y.; Murakami, H.; Suga, H. Ribosomal synthesis of peptides with C-terminal lactams, thiolactones, and alkylamides ChemBioChem 2009, 10, 1186-1192
    • (2009) ChemBioChem , vol.10 , pp. 1186-1192
    • Nakajima, E.1    Goto, Y.2    Sako, Y.3    Murakami, H.4    Suga, H.5
  • 28
    • 44349159497 scopus 로고    scopus 로고
    • Ribosomal synthesis of peptidase-resistant peptides closed by a nonreducible inter-side-chain bond
    • Sako, Y.; Goto, Y.; Murakami, H.; Suga, H. Ribosomal synthesis of peptidase-resistant peptides closed by a nonreducible inter-side-chain bond ACS Chem. Biol. 2008, 3, 241-249
    • (2008) ACS Chem. Biol. , vol.3 , pp. 241-249
    • Sako, Y.1    Goto, Y.2    Murakami, H.3    Suga, H.4
  • 29
    • 44949231370 scopus 로고    scopus 로고
    • Ribosomal synthesis of bicyclic peptides via two orthogonal inter-side-chain reactions
    • DOI 10.1021/ja800953c
    • Sako, Y.; Morimoto, J.; Murakami, H.; Suga, H. Ribosomal synthesis of bicyclic peptides via two orthogonal inter-side-chain reactions J. Am. Chem. Soc. 2008, 130, 7232-7234 (Pubitemid 351813209)
    • (2008) Journal of the American Chemical Society , vol.130 , Issue.23 , pp. 7232-7234
    • Sako, Y.1    Morimoto, J.2    Murakami, H.3    Suga, H.4
  • 30
    • 70349556387 scopus 로고    scopus 로고
    • Ribosomal synthesis of cyclic peptides with a fluorogenic oxidative coupling reaction
    • Yamagishi, Y.; Ashigai, H.; Goto, Y.; Murakami, H.; Suga, H. Ribosomal synthesis of cyclic peptides with a fluorogenic oxidative coupling reaction ChemBioChem 2009, 10, 1469-1472
    • (2009) ChemBioChem , vol.10 , pp. 1469-1472
    • Yamagishi, Y.1    Ashigai, H.2    Goto, Y.3    Murakami, H.4    Suga, H.5
  • 31
    • 56049116948 scopus 로고    scopus 로고
    • Expression of histone H3 tails with combinatorial lysine modifications under the reprogrammed genetic code for the investigation on epigenetic markers
    • Kang, T. J.; Yuzawa, S.; Suga, H. Expression of histone H3 tails with combinatorial lysine modifications under the reprogrammed genetic code for the investigation on epigenetic markers Chem. Biol. 2008, 15, 1166-1174
    • (2008) Chem. Biol. , vol.15 , pp. 1166-1174
    • Kang, T.J.1    Yuzawa, S.2    Suga, H.3
  • 33
    • 68049148252 scopus 로고    scopus 로고
    • Ribosomall synthesis of dehydrobutyrine- and methyllanthionine-containg peptides
    • Goto, Y.; Iwasaki, K.; Torikai, K.; Murakami, H.; Suga, H. Ribosomall synthesis of dehydrobutyrine- and methyllanthionine-containg peptides Chem. Commun. 2009, 23, 3419-3421
    • (2009) Chem. Commun. , vol.23 , pp. 3419-3421
    • Goto, Y.1    Iwasaki, K.2    Torikai, K.3    Murakami, H.4    Suga, H.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.