메뉴 건너뛰기




Volumn 88, Issue 1, 2012, Pages 53-62

Novel broad-host-range vehicles for cloning and shuffling of gene cassettes

Author keywords

Cassette shuffling; IncU minireplicon; Library of functional modules; New biotechnology tools

Indexed keywords

CHLORAMPHENICOL; KANAMYCIN; RHO FACTOR; TETRACYCLINE;

EID: 83955162354     PISSN: 01677012     EISSN: 18728359     Source Type: Journal    
DOI: 10.1016/j.mimet.2011.10.011     Document Type: Article
Times cited : (13)

References (56)
  • 1
    • 67649205495 scopus 로고    scopus 로고
    • A plasmid RK2-based broad-host-range cloning vector useful for transfer of metagenomic libraries to a variety of bacterial species
    • Aakvik T., Degnes K.F., Dahlsrud R., Schmidt F., Dam R., Yu L., Völker U., Ellingsen T.E., Valla S. A plasmid RK2-based broad-host-range cloning vector useful for transfer of metagenomic libraries to a variety of bacterial species. FEMS Microbiol. Lett. 2009, 296:149-158.
    • (2009) FEMS Microbiol. Lett. , vol.296 , pp. 149-158
    • Aakvik, T.1    Degnes, K.F.2    Dahlsrud, R.3    Schmidt, F.4    Dam, R.5    Yu, L.6    Völker, U.7    Ellingsen, T.E.8    Valla, S.9
  • 2
    • 0015131716 scopus 로고
    • Detection of R factors in naturally occurring Aeromonas salmonicida strains
    • Aoki T., Egusa S., Kimura T., Watanabe T. Detection of R factors in naturally occurring Aeromonas salmonicida strains. Appl. Microbiol. 1971, 22:716-717.
    • (1971) Appl. Microbiol. , vol.22 , pp. 716-717
    • Aoki, T.1    Egusa, S.2    Kimura, T.3    Watanabe, T.4
  • 3
    • 0019805971 scopus 로고
    • Specific-purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas
    • Bagdasarian M., Lurz R., Rückert B., Franklin F.C., Bagdasarian M.M., Frey J., Timmis K.N. Specific-purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene 1981, 16:237-247.
    • (1981) Gene , vol.16 , pp. 237-247
    • Bagdasarian, M.1    Lurz, R.2    Rückert, B.3    Franklin, F.C.4    Bagdasarian, M.M.5    Frey, J.6    Timmis, K.N.7
  • 4
    • 0030942268 scopus 로고    scopus 로고
    • Construction and use of a versatile set of broad-host-range cloning and expression vectors based on the RK2 replicon
    • Blatny J.M., Brautaset T., Winther-Larsen H.C., Haugan K., Valla S. Construction and use of a versatile set of broad-host-range cloning and expression vectors based on the RK2 replicon. Appl. Environ. Microbiol. 1997, 63:370-379.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 370-379
    • Blatny, J.M.1    Brautaset, T.2    Winther-Larsen, H.C.3    Haugan, K.4    Valla, S.5
  • 5
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 1976, 72:248-254.
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 6
    • 78149455681 scopus 로고    scopus 로고
    • Rational design of a plasmid origin that replicates efficiently in both gram-positive and gram-negative bacteria
    • Bryksin A.V., Matsumura I. Rational design of a plasmid origin that replicates efficiently in both gram-positive and gram-negative bacteria. PLoS One 2010, 5:e13244.
    • (2010) PLoS One , vol.5
    • Bryksin, A.V.1    Matsumura, I.2
  • 7
    • 0024297566 scopus 로고
    • Mini-P1 plasmid replication: the autoregulation-sequestration paradox
    • Chattoraj D.K., Mason R.J., Wickner S.H. Mini-P1 plasmid replication: the autoregulation-sequestration paradox. Cell 1988, 52:551-557.
    • (1988) Cell , vol.52 , pp. 551-557
    • Chattoraj, D.K.1    Mason, R.J.2    Wickner, S.H.3
  • 8
    • 0022846811 scopus 로고
    • Broad host range vectors derived from an RSF1010::Tn1 plasmid
    • Chistoserdov A.Y., Tsygankov Y.D. Broad host range vectors derived from an RSF1010::Tn1 plasmid. Plasmid 1986, 16:161-167.
    • (1986) Plasmid , vol.16 , pp. 161-167
    • Chistoserdov, A.Y.1    Tsygankov, Y.D.2
  • 10
    • 85056010559 scopus 로고
    • Construction of a broad-host-range non-mobilizable stable vector carrying RP4 par-region
    • Crouzet J., Lévy-Schil S., Cauchois L., Cameron B. Construction of a broad-host-range non-mobilizable stable vector carrying RP4 par-region. Gene 1992, 110:105-108.
    • (1992) Gene , vol.110 , pp. 105-108
    • Crouzet, J.1    Lévy-Schil, S.2    Cauchois, L.3    Cameron, B.4
  • 12
    • 0031559558 scopus 로고    scopus 로고
    • Organization of the leading region of IncN plasmid pKM101 (R46): a regulation controlled by CUP sequence elements
    • Delver E.P., Belogurov A.A. Organization of the leading region of IncN plasmid pKM101 (R46): a regulation controlled by CUP sequence elements. J. Mol. Biol. 1997, 271:13-30.
    • (1997) J. Mol. Biol. , vol.271 , pp. 13-30
    • Delver, E.P.1    Belogurov, A.A.2
  • 13
    • 0022000283 scopus 로고
    • Plasmids related to the broad host range vector, pRK290, useful for gene cloning and for monitoring gene expression
    • Ditta G., Schmidhauser T., Yakobson E., Lu P., Liang X.W., Finlay D.R., Guiney D., Helinski D.R. Plasmids related to the broad host range vector, pRK290, useful for gene cloning and for monitoring gene expression. Plasmid 1985, 13:149-153.
    • (1985) Plasmid , vol.13 , pp. 149-153
    • Ditta, G.1    Schmidhauser, T.2    Yakobson, E.3    Lu, P.4    Liang, X.W.5    Finlay, D.R.6    Guiney, D.7    Helinski, D.R.8
  • 14
    • 0035118642 scopus 로고    scopus 로고
    • Stable RK2-derived cloning vectors for the analysis of gene expression and gene function in gram-negative bacteria
    • Dombrecht B., Vanderleyden J., Michiels J. Stable RK2-derived cloning vectors for the analysis of gene expression and gene function in gram-negative bacteria. Mol. Plant Microbe Interact. 2001, 14:426-430.
    • (2001) Mol. Plant Microbe Interact. , vol.14 , pp. 426-430
    • Dombrecht, B.1    Vanderleyden, J.2    Michiels, J.3
  • 15
    • 67649562300 scopus 로고    scopus 로고
    • Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA
    • Dunham T.D., Xu W., Funnell B.E., Schumacher M.A. Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA. EMBO J. 2009, 28:1792-1802.
    • (2009) EMBO J. , vol.28 , pp. 1792-1802
    • Dunham, T.D.1    Xu, W.2    Funnell, B.E.3    Schumacher, M.A.4
  • 16
    • 79959744352 scopus 로고    scopus 로고
    • DIY series of genetic cassettes useful in construction of versatile vectors specific for Alphaproteobacteria
    • Dziewit L., Adamczuk M., Szuplewska M., Bartosik D. DIY series of genetic cassettes useful in construction of versatile vectors specific for Alphaproteobacteria. J. Microbiol. Methods 2011, 86:166-174.
    • (2011) J. Microbiol. Methods , vol.86 , pp. 166-174
    • Dziewit, L.1    Adamczuk, M.2    Szuplewska, M.3    Bartosik, D.4
  • 18
    • 0026608584 scopus 로고
    • Construction of a broad host range shuttle vector for gene cloning and expression in Actinobacillus pleuropneumoniae and other Pasteurellaceae
    • Frey J. Construction of a broad host range shuttle vector for gene cloning and expression in Actinobacillus pleuropneumoniae and other Pasteurellaceae. Res. Microbiol. 1992, 143:263-269.
    • (1992) Res. Microbiol. , vol.143 , pp. 263-269
    • Frey, J.1
  • 19
    • 0023802627 scopus 로고
    • The P1 plasmid-partition system synthesizes two essential proteins from an autoregulated operon
    • Friedman S.A., Austin S.J. The P1 plasmid-partition system synthesizes two essential proteins from an autoregulated operon. Plasmid 1988, 19:103-112.
    • (1988) Plasmid , vol.19 , pp. 103-112
    • Friedman, S.A.1    Austin, S.J.2
  • 20
    • 0022353698 scopus 로고
    • Versatile mercury-resistant cloning and expression vectors
    • Gambill B.D., Summers A.O. Versatile mercury-resistant cloning and expression vectors. Gene 1985, 39:293-297.
    • (1985) Gene , vol.39 , pp. 293-297
    • Gambill, B.D.1    Summers, A.O.2
  • 21
    • 0033861269 scopus 로고    scopus 로고
    • Plasmid and chromosome partitioning: surprises from phylogeny
    • Gerdes K., Moller-Jensen J., Bugge J.R. Plasmid and chromosome partitioning: surprises from phylogeny. Mol. Microbiol. 2000, 37:455-466.
    • (2000) Mol. Microbiol. , vol.37 , pp. 455-466
    • Gerdes, K.1    Moller-Jensen, J.2    Bugge, J.R.3
  • 22
    • 0020959710 scopus 로고
    • Studies on transformation of Escherichia coli with plasmids
    • Hanahan D. Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol. 1983, 166:557-580.
    • (1983) J. Mol. Biol. , vol.166 , pp. 557-580
    • Hanahan, D.1
  • 23
    • 0031888009 scopus 로고    scopus 로고
    • Autoregulation of the partition genes of the mini-F plasmid and the intracellular localization of their products in Escherichia coli
    • Hirano M., Mori H., Onogi T., Yamazoe M., Niki H., Ogura T., Hiraga S. Autoregulation of the partition genes of the mini-F plasmid and the intracellular localization of their products in Escherichia coli. Mol. Gen. Genet. 1998, 257:392-403.
    • (1998) Mol. Gen. Genet. , vol.257 , pp. 392-403
    • Hirano, M.1    Mori, H.2    Onogi, T.3    Yamazoe, M.4    Niki, H.5    Ogura, T.6    Hiraga, S.7
  • 24
    • 0026759785 scopus 로고
    • Crosstalk between plasmid vegetative replication and conjugative transfer: repression of the trfA operon by trbA of broad host range plasmid RK2
    • Jagura-Burdzy G., Khanim F., Smith C.A., Thomas C.M. Crosstalk between plasmid vegetative replication and conjugative transfer: repression of the trfA operon by trbA of broad host range plasmid RK2. Nucleic Acids Res. 1992, 20:3939-3944.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 3939-3944
    • Jagura-Burdzy, G.1    Khanim, F.2    Smith, C.A.3    Thomas, C.M.4
  • 28
    • 0028793123 scopus 로고
    • Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes
    • Kovach M.E., Elzer P.H., Hill D.S., Robertson G.T., Farris M.A., Roop R.M., Peterson K.M. Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 1995, 166:175-176.
    • (1995) Gene , vol.166 , pp. 175-176
    • Kovach, M.E.1    Elzer, P.H.2    Hill, D.S.3    Robertson, G.T.4    Farris, M.A.5    Roop, R.M.6    Peterson, K.M.7
  • 29
    • 46949101915 scopus 로고    scopus 로고
    • Genomic and functional characterization of modular broad-host-range RA3 plasmid, the archetype of IncU group
    • Kulinska A., Czeredys M., Hayes F., Jagura -Burdzy G. Genomic and functional characterization of modular broad-host-range RA3 plasmid, the archetype of IncU group. Appl. Environ. Microbiol. 2008, 74:4119-4132.
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 4119-4132
    • Kulinska, A.1    Czeredys, M.2    Hayes, F.3    Jagura -Burdzy, G.4
  • 30
    • 79953269570 scopus 로고    scopus 로고
    • The centromere site of the segregation cassette of broad-host-range plasmid RA3 is located at the border of the maintenance and conjugative transfer modules
    • Kulinska A., Cao Y., Macioszek M., Hayes F., Jagura-Burdzy G. The centromere site of the segregation cassette of broad-host-range plasmid RA3 is located at the border of the maintenance and conjugative transfer modules. Appl. Environ. Microbiol. 2011, 77:2414-2427.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 2414-2427
    • Kulinska, A.1    Cao, Y.2    Macioszek, M.3    Hayes, F.4    Jagura-Burdzy, G.5
  • 32
    • 0030741756 scopus 로고    scopus 로고
    • Divergence and conservation of the partitioning and global regulation functions in the central control region of the IncP plasmids RK2 and R751
    • Macartney D.P., Williams D.R., Stafford T., Thomas C.M. Divergence and conservation of the partitioning and global regulation functions in the central control region of the IncP plasmids RK2 and R751. Microbiology 1997, 143:2167-2177.
    • (1997) Microbiology , vol.143 , pp. 2167-2177
    • Macartney, D.P.1    Williams, D.R.2    Stafford, T.3    Thomas, C.M.4
  • 34
    • 0034691183 scopus 로고    scopus 로고
    • Replication induced transcription of an autorepressed gene: the replication initiator gene of plasmid P1
    • Mukhopadhyay S., Chattoraj D.K. Replication induced transcription of an autorepressed gene: the replication initiator gene of plasmid P1. Proc. Natl. Acad. Sci. U. S. A. 2000, 97:7142-7147.
    • (2000) Proc. Natl. Acad. Sci. U. S. A. , vol.97 , pp. 7142-7147
    • Mukhopadhyay, S.1    Chattoraj, D.K.2
  • 36
    • 77954974482 scopus 로고    scopus 로고
    • A series of IncQ-based reporter plasmids for use in a range of Gram negative genera
    • O'Sullivan L.E., Nickerson C.A., Wilson J.W. A series of IncQ-based reporter plasmids for use in a range of Gram negative genera. J. Microbiol. Biotechnol. 2010, 20:871-874.
    • (2010) J. Microbiol. Biotechnol. , vol.20 , pp. 871-874
    • O'Sullivan, L.E.1    Nickerson, C.A.2    Wilson, J.W.3
  • 38
    • 0027381431 scopus 로고
    • Construction and use of a new broad-host-range lacZ transcriptional fusion vector, pHRP309, for gram-bacteria
    • Parales R.E., Harwood C.S. Construction and use of a new broad-host-range lacZ transcriptional fusion vector, pHRP309, for gram-bacteria. Gene 1993, 133:23-30.
    • (1993) Gene , vol.133 , pp. 23-30
    • Parales, R.E.1    Harwood, C.S.2
  • 39
    • 0021867209 scopus 로고
    • Extension of the host range of Escherichia coli vectors by incorporation of RSF1010 replication and mobilization functions
    • Priefer U.B., Simon R., Pühler A. Extension of the host range of Escherichia coli vectors by incorporation of RSF1010 replication and mobilization functions. J. Bacteriol. 1985, 163:324-330.
    • (1985) J. Bacteriol. , vol.163 , pp. 324-330
    • Priefer, U.B.1    Simon, R.2    Pühler, A.3
  • 40
    • 0025947314 scopus 로고
    • Broad host-range vector for efficient expression of foreign genes in gram-negative bacteria
    • Rangwala S.H., Fuchs R.L., Drahos D.J., Olins P.O. Broad host-range vector for efficient expression of foreign genes in gram-negative bacteria. Biotechnology (NY) 1991, 9:477-479.
    • (1991) Biotechnology (NY) , vol.9 , pp. 477-479
    • Rangwala, S.H.1    Fuchs, R.L.2    Drahos, D.J.3    Olins, P.O.4
  • 41
    • 0028828710 scopus 로고
    • New plasmids carrying antibiotic-resistance cassettes
    • Reece K.S., Phillips G.J. New plasmids carrying antibiotic-resistance cassettes. Gene 1995, 165:141-142.
    • (1995) Gene , vol.165 , pp. 141-142
    • Reece, K.S.1    Phillips, G.J.2
  • 42
    • 0033827716 scopus 로고    scopus 로고
    • Distribution of oxytetracycline resistance plasmids between aeromonads in hospital and aquaculture environments: implication of Tn1721 in dissemination of the tetracycline resistance determinant TetA
    • Rhodes G., Huys G., Swings J., McGann P., Hiney M., Smith P., Pickup R.W. Distribution of oxytetracycline resistance plasmids between aeromonads in hospital and aquaculture environments: implication of Tn1721 in dissemination of the tetracycline resistance determinant TetA. Appl. Environ. Microbiol. 2000, 66:3883-3890.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 3883-3890
    • Rhodes, G.1    Huys, G.2    Swings, J.3    McGann, P.4    Hiney, M.5    Smith, P.6    Pickup, R.W.7
  • 43
    • 0025933063 scopus 로고
    • The kis and kid genes of the parD maintenance system of plasmid R1 form an operon that is autoregulated at the level of transcription by the co-ordinated action of the Kis and Kid proteins
    • Ruiz-Echevarría M.J., Berzal-Herranz A., Gerdes K., Díaz-Orejas R. The kis and kid genes of the parD maintenance system of plasmid R1 form an operon that is autoregulated at the level of transcription by the co-ordinated action of the Kis and Kid proteins. Mol. Microbiol. 1991, 5:2685-2693.
    • (1991) Mol. Microbiol. , vol.5 , pp. 2685-2693
    • Ruiz-Echevarría, M.J.1    Berzal-Herranz, A.2    Gerdes, K.3    Díaz-Orejas, R.4
  • 46
    • 0038798524 scopus 로고    scopus 로고
    • Sequences of versatile broad-host-range vectors of the RK2 family
    • Scott H.N., Laible P.D., Hanson D.K. Sequences of versatile broad-host-range vectors of the RK2 family. Plasmid 2003, 50:74-79.
    • (2003) Plasmid , vol.50 , pp. 74-79
    • Scott, H.N.1    Laible, P.D.2    Hanson, D.K.3
  • 47
    • 0021219265 scopus 로고
    • Broad host range cloning vectors for bacteria
    • Sharpe G. Broad host range cloning vectors for bacteria. Gene 1984, 29:93-102.
    • (1984) Gene , vol.29 , pp. 93-102
    • Sharpe, G.1
  • 48
    • 0001774405 scopus 로고
    • A broad host mobilization system for in vivo genetic engineering: transposon mutagenesis in Gram negative bacteria
    • Simon R., Priefer U., Puhler A. A broad host mobilization system for in vivo genetic engineering: transposon mutagenesis in Gram negative bacteria. Bio/Technology 1983, 1:37-45.
    • (1983) Bio/Technology , vol.1 , pp. 37-45
    • Simon, R.1    Priefer, U.2    Puhler, A.3
  • 49
    • 0022495405 scopus 로고
    • Kanamycin-resistant vectors that are analogues of plasmids pUC8, pUC9, EMBL8 and EMBL9
    • Spratt B.G., Hedge P.J., de Heesen S., Edelman A., Broome-Smith J.K. Kanamycin-resistant vectors that are analogues of plasmids pUC8, pUC9, EMBL8 and EMBL9. Gene 1986, 41:337-342.
    • (1986) Gene , vol.41 , pp. 337-342
    • Spratt, B.G.1    Hedge, P.J.2    de Heesen, S.3    Edelman, A.4    Broome-Smith, J.K.5
  • 50
    • 0033854944 scopus 로고    scopus 로고
    • Paradigms of plasmid organization
    • Thomas C.M. Paradigms of plasmid organization. Mol. Microbiol. 2000, 37:485-491.
    • (2000) Mol. Microbiol. , vol.37 , pp. 485-491
    • Thomas, C.M.1
  • 52
    • 0036152835 scopus 로고    scopus 로고
    • Mobile elements as a combination of functional modules
    • Toussaint A., Merlin C. Mobile elements as a combination of functional modules. Plasmid 2002, 47:26-35.
    • (2002) Plasmid , vol.47 , pp. 26-35
    • Toussaint, A.1    Merlin, C.2
  • 53
    • 0019832105 scopus 로고
    • Characterization of conjugative R plasmids belonging to the new incompatibility group IncU
    • Tschape H., Tietze E., Koch C. Characterization of conjugative R plasmids belonging to the new incompatibility group IncU. J. Gen. Microbiol. 1981, 127:155-160.
    • (1981) J. Gen. Microbiol. , vol.127 , pp. 155-160
    • Tschape, H.1    Tietze, E.2    Koch, C.3
  • 54
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains: nucleotide sequence of the M13mp18 and pUC19 vectors
    • Yanisch-Perron C., Vieira J., Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequence of the M13mp18 and pUC19 vectors. Gene 1985, 33:103-119.
    • (1985) Gene , vol.33 , pp. 103-119
    • Yanisch-Perron, C.1    Vieira, J.2    Messing, J.3
  • 55
    • 0028037220 scopus 로고
    • Regulation of transfer genes of promiscuous IncP alpha plasmid RK2: repression of Tra1 region transcription both by relaxosome proteins and by the Tra2 regulator TrbA
    • Zatyka M., Jagura-Burdzy G., Thomas C.M. Regulation of transfer genes of promiscuous IncP alpha plasmid RK2: repression of Tra1 region transcription both by relaxosome proteins and by the Tra2 regulator TrbA. Microbiology 1994, 140:2981-2990.
    • (1994) Microbiology , vol.140 , pp. 2981-2990
    • Zatyka, M.1    Jagura-Burdzy, G.2    Thomas, C.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.