Cloning and characterization of a putative β-glucosidase (NfBGL595) from Neosartorya fischeri

Process Biochemistry

Volumn 47, Issue 1, 2012, Pages 99-105

  Ramachandran, Priyadharshini ^a   Tiwari, Manish Kumar ^a   Singh, Raushan Kumar ^a   Haw, Jung Rim ^a   Jeya, Marimuthu ^a   Lee, Jung Kul ^a  

^a Konkuk University   (South Korea)

Author keywords

Glucosidase; Characterization; Glycoside hydrolase family 1; Molecular dynamics simulation; Wine aroma

Indexed keywords

AMINO ACID RESIDUES; ARYL GLYCOSIDES; CELLOBIOSE; DNA SEQUENCE ANALYSIS; GLUCOSIDASE; GLYCOSIDE HYDROLASE FAMILY 1; HOMOLOGY MODELS; MOLECULAR DYNAMICS SIMULATIONS; NEOSARTORYA FISCHERI; OPEN READING FRAME; OPTIMAL TEMPERATURE; SUBSTRATE SPECIFICITY; TRICHODERMA REESEI; WHOLE GENOME SEQUENCES; WINE AROMA; X RAY CRYSTAL STRUCTURES;

AMINO ACIDS; CATALYST ACTIVITY; CHARACTERIZATION; CLONING; CRYSTAL STRUCTURE; DYNAMICS; ESCHERICHIA COLI; GENES; MOLECULAR DYNAMICS; MOLECULAR MECHANICS; SUGARS; WINE;

ENZYME ACTIVITY;

ESCHERICHIA COLI; HYPOCREA JECORINA; NEOSARTORYA; NEOSARTORYA FISCHERI;

EID: 83655167138     PISSN: 13595113     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.procbio.2011.10.015     Document Type: Article

References (42)

1. S. Pal, S.P. Banik, S. Ghorai, S. Chowdhury, and S. Khowala Purification and characterization of a thermostable intra-cellular β-glucosidase with transglycosylation properties from filamentous fungus Termitomyces clypeatus Bioresour Technol 101 2010 2412 2420
2. P. Beguin Molecular biology of cellulose degradation Annu Rev Microbiol 44 1990 219 248
3. Y. Bhatia, S. Mishra, and V.S. Bisaria Microbial β-glucosidases: cloning, properties, and applications Crit Rev Biotechnol 22 2002 375 407 (Pubitemid 35446303)
4. B. Brzobohaty, I. Moore, P. Kristoffersen, L. Bako, N. Campos, and J. Schell Release of active cytokinin by a β-glucosidase localized to the maize root meristem Science 262 1993 1051 1054 (Pubitemid 24035043)
5. R. Leah, J. Kigel, I. Svendsen, and J. Mundy Biochemical and molecular characterization of a barley seed β-glucosidase J Biol Chem 270 1995 15789 15797
6. M.A. Villena, Iranzo JFÚ, and A.I.B. Pérez β-Glucosidase activity in wine yeasts: application in enology Enzyme Microb Technol 40 2007 420 425 (Pubitemid 46073153)
7. N.P.L.K. Nguyen, K.M. Lee, I.W. Kim, Y.S. Kim, M. Jeya, and J.K. Lee One-step purification and characterization of a β-1,4-glucosidase from a newly isolated strain of Stereum hirsutum Appl Microbiol Biotechnol 87 2010 2107 2116
8. R.N. Barbagallo, G. Spagna, R. Palmeri, C. Restuccia, and P. Giudici Selection, characterization and comparison of β-glucosidase from mould and yeasts employable for enological applications Enzyme Microb Technol 35 2004 58 66 (Pubitemid 38759795)
9. C. Riou, J.M. Salmon, M.J. Vallier, Z. Gunata, and P. Barre Purification, characterization, and substrate specificity of a novel highly glucose-tolerant β-glucosidase from Aspergillus oryzae Appl Environ Microbiol 64 1998 3607 3614 (Pubitemid 28462947)
10. B. Henrissat Sequence homology between a β-galactosidase and some β-glucosidases Protein Seq Data Anal 4 1991 61 62
11. B. Henrissat, and A. Bairoch New families in the classification of glycosyl hydrolases based on amino acid sequence similarities Biochem J 293 Pt 3 1993 781 788 (Pubitemid 23244564)
12. B. Henrissat, and A. Bairoch Updating the sequence-based classification of glycosyl hydrolases Biochem J 316 Pt 2 1996 695 696 (Pubitemid 26182174)
13. J.L. Viladot, F. Canals, X. Batllori, and A. Planas Long-lived glycosyl-enzyme intermediate mimic produced by formate re-activation of a mutant endoglucanase lacking its catalytic nucleophile Biochem J 355 2001 79 86 (Pubitemid 32304237)
14. W. Chuenchor, S. Pengthaisong, R.C. Robinson, J. Yuvaniyama, W. Oonanant, and D.R. Bevan Structural insights into rice BGlu1 β-glucosidase oligosaccharide hydrolysis and transglycosylation J Mol Biol 377 2008 1200 1215
15. M. Jeya, A.R. Joo, K.M. Lee, M.K. Tiwari, S.H. Kim, and J.K. Lee Characterization of β-glucosidase from a strain of Penicillium purpurogenum KJS506 Appl Microbiol Biotechnol 86 2010 1473 1484
16. A.R. Joo, M. Jeya, K.M. Lee, W.I. Sim, J.S. Kim, and I.W. Kim Purification and characterization of a β-1,4-glucosidase from a newly isolated strain of Fomitopsis pinicola Appl Microbiol Biotechnol 83 2009 285 294
17. R.K. Singh, Y.W. Zhang, N.P. Nguyen, M. Jeya, and J.K. Lee Covalent immobilization of β-1,4-glucosidase from Agaricus arvensis onto functionalized silicon oxide nanoparticles Appl Microbiol Biotechnol 89 2011 337 344
18. B. Benoliel, M.J. Pocas-Fonseca, F.A. Torres, and L.M. de Moraes Expression of a glucose-tolerant β-glucosidase from Humicola grisea var. thermoidea in Saccharomyces cerevisiae Appl Biochem Biotechnol 160 2010 2036 2044
19. J. Hong, H. Tamaki, and H. Kumagai Cloning and functional expression of thermostable β-glucosidase gene from Thermoascus aurantiacus Appl Microbiol Biotechnol 73 2007 1331 1339 (Pubitemid 46089506)
20. X. Li, J. Pei, G. Wu, and W. Shao Expression, purification and characterization of a recombinant β-glucosidase from Volvariella volvacea Biotechnol Lett 27 2005 1369 1373 (Pubitemid 41805630)
21. P. Murray, N. Aro, C. Collins, A. Grassick, M. Penttila, and M. Saloheimo Expression in Trichoderma reesei and characterisation of a thermostable family 3 β-glucosidase from the moderately thermophilic fungus Talaromyces emersonii Protein Expr Purif 38 2004 248 257 (Pubitemid 39527263)
22. K. Tokuhiro, N. Ishida, A. Kondo, and H. Takahashi Lactic fermentation of cellobiose by a yeast strain displaying β-glucosidase on the cell surface Appl Microbiol Biotechnol 79 2008 481 488
23. K. Iwashita, T. Nagahara, H. Kimura, M. Takano, H. Shimoi, and K. Ito The bglA gene of Aspergillus kawachii encodes both extracellular and cell wall-bound β-glucosidases Appl Environ Microbiol 65 1999 5546 5553 (Pubitemid 129520649)
24. T.M.S. Mase, and M. Yokoe Purification, characterization, and a potential application of β-glucosidase from Aspergillus pulverulentus YM-80 J Appl Glycosci 2004 51
25. A. Kotaka, H. Bando, M. Kaya, M. Kato-Murai, K. Kuroda, and H. Sahara Direct ethanol production from barley β-glucan by sake yeast displaying Aspergillus oryzae β-glucosidase and endoglucanase J Biosci Bioeng 105 2008 622 627 (Pubitemid 351978295)
26. N.D. Fedorova, N. Khaldi, V.S. Joardar, R. Maiti, P. Amedeo, and M.J. Anderson Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus PLoS Genet 4 2008 e1000046
27. J.H. Kim, P. Prabhu, M. Jeya, M.K. Tiwari, H.J. Moon, and R.K. Singh Characterization of an l-arabinose isomerase from Bacillus subtilis Appl Microbiol Biotechnol 85 2010 1839 1847
28. M. Pandey, and S. Mishra Expression and characterization of Pichia etchellsii β-glucosidase in Escherichia coli Gene 190 1997 45 51 (Pubitemid 27214269)
29. MMB A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding Anal Biochem 72 1976 248 254
30. W.Y. Jeng, N.C. Wang, M.H. Lin, C.T. Lin, Y.C. Liaw, and W.J. Chang Structural and functional analysis of three β-glucosidases from bacterium Clostridium cellulovorans, fungus Trichoderma reesei and termite Neotermes koshunensis J Struct Biol 173 2011 46 56
31. R. Laskowski, M. MacArthur, D. Moss, and J. Thornton PROCHECK: a program to check the stereochemical quality of protein structures J Appl Crystallogr 26 1993 283 291
32. S.C. Lovell, I.W. Davis, W.B. Arendall 3rd., P.I. de Bakker, J.M. Word, and M.G. Prisant Structure validation by Ca geometry: phi, psi and Cb deviation Proteins 50 2003 437 450 (Pubitemid 36158457)
33. P. Toonkool, P. Metheenukul, P. Sujiwattanarat, P. Paiboon, N. Tongtubtim, and M. Ketudat-Cairns Expression and purification of dalcochinase, a β-glucosidase from Dalbergia cochinchinensis Pierre, in yeast and bacterial hosts Protein Expr Purif 48 2006 195 204 (Pubitemid 44093276)
34. T. Tsukada, K. Igarashi, M. Yoshida, and M. Samejima Molecular cloning and characterization of two intracellular β-glucosidases belonging to glycoside hydrolase family 1 from the basidiomycete Phanerochaete chrysosporium Appl Microbiol Biotechnol 73 2006 807 814 (Pubitemid 44833027)
35. C.H. Decker, J. Visser, and P. Schreier β-Glucosidase multiplicity from Aspergillus tubingensis CBS 643.92: purification and characterization of four β-glucosidases and their differentiation with respect to substrate specificity, glucose inhibition and acid tolerance Appl Microbiol Biotechnol 55 2001 157 163 (Pubitemid 32260743)
36. K.B. Krogh, P.V. Harris, C.L. Olsen, K.S. Johansen, J. Hojer-Pedersen, and J. Borjesson Characterization and kinetic analysis of a thermostable GH3 β-glucosidase from Penicillium brasilianum Appl Microbiol Biotechnol 86 2010 143 154
37. B.C.I. Henrissat, S. Fabrega, P. Lehn, J.P. Mornon, and G. Davies Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases Proc Natl Acad Sci U S A 92 1995 7090 7094
38. M. Makoto, O. Isao, F. Sakuzo, and Y. Ichiro Nucleotide sequences of Saccharomycopsis fibuligera genes for extracellular β-glucosidases as expressed in Saccharomyces cerevisiae Appl Environ Microbiol 54 1988 3147 3155
39. H.D. Ly, and S.G. Withers Mutagenesis of glycosidases Annu Rev Biochem 68 1999 487 522 (Pubitemid 29449201)
40. R. Palmeri, and G. Spagna β-Glucosidase in cellular and acellular form for winemaking application Enzyme Microb Technol 40 2007 382 389 (Pubitemid 46073151)
41. JT. G. Ni, M. Takehara, and H. Watanabe Heterologous expression and enzymatic characterization of -glucosidase from the drywood-eating termite, Neotermes koshunensis Appl Entomol Zool 2007 42
42. M. Leclerc, P. Chemardin, A. Arnaud, R. Ratomahenina, P. Galzy, and C. Gerbaud Comparison of the properties of the purified β-glucosidase from the transformed strain of Saccharomyces cerevisiae TYKF2 with that of the donor strain Kluyveromyces fragilis Y610 Biotechnol Appl Biochem 9 1987 410 422