-
1
-
-
1542515338
-
A census of human cancer genes
-
Futreal PA, Coin L, Marshall M, Down T, Hubbard T, et al. (2004) A census of human cancer genes. Nat Rev Cancer 4: 177-183.
-
(2004)
Nat Rev Cancer
, vol.4
, pp. 177-183
-
-
Futreal, P.A.1
Coin, L.2
Marshall, M.3
Down, T.4
Hubbard, T.5
-
2
-
-
33947101019
-
Patterns of somatic mutation in human cancer genomes
-
Greenman C, Stephens P, Smith R, Dalgliesh GL, Hunter C, et al. (2007) Patterns of somatic mutation in human cancer genomes. Nature 446: 153-158.
-
(2007)
Nature
, vol.446
, pp. 153-158
-
-
Greenman, C.1
Stephens, P.2
Smith, R.3
Dalgliesh, G.L.4
Hunter, C.5
-
3
-
-
57549098807
-
The Catalogue of Somatic Mutations in Cancer (COSMIC)
-
Forbes SA, Bhamra G, Bamford S, Dawson E, Kok C, et al. (2008) The Catalogue of Somatic Mutations in Cancer (COSMIC). Curr Protoc Hum Genet Chapter 10: Unit 10-11.
-
(2008)
Curr Protoc Hum Genet Chapter
, vol.10
, pp. 10-11
-
-
Forbes, S.A.1
Bhamra, G.2
Bamford, S.3
Dawson, E.4
Kok, C.5
-
4
-
-
18744407884
-
KinMutBase: a registry of disease-causing mutations in protein kinase domains
-
Ortutay C, Valiaho J, Stenberg K, Vihinen M, (2005) KinMutBase: a registry of disease-causing mutations in protein kinase domains. Hum Mutat 25: 435-442.
-
(2005)
Hum Mutat
, vol.25
, pp. 435-442
-
-
Ortutay, C.1
Valiaho, J.2
Stenberg, K.3
Vihinen, M.4
-
5
-
-
58149199567
-
MoKCa database-mutations of kinases in cancer
-
Richardson CJ, Gao Q, Mitsopoulous C, Zvelebil M, Pearl LH, et al. (2009) MoKCa database-mutations of kinases in cancer. Nucleic Acids Res 37: D824-831.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Richardson, C.J.1
Gao, Q.2
Mitsopoulous, C.3
Zvelebil, M.4
Pearl, L.H.5
-
6
-
-
48249116424
-
Congenital disease SNPs target lineage specific structural elements in protein kinases
-
Torkamani A, Kannan N, Taylor SS, Schork NJ, (2008) Congenital disease SNPs target lineage specific structural elements in protein kinases. Proc Natl Acad Sci U S A 105: 9011-9016.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 9011-9016
-
-
Torkamani, A.1
Kannan, N.2
Taylor, S.S.3
Schork, N.J.4
-
7
-
-
40949161558
-
Prediction of cancer driver mutations in protein kinases
-
Torkamani A, Schork NJ, (2008) Prediction of cancer driver mutations in protein kinases. Cancer Res 68: 1675-1682.
-
(2008)
Cancer Res
, vol.68
, pp. 1675-1682
-
-
Torkamani, A.1
Schork, N.J.2
-
8
-
-
70349561118
-
Pathway and network analysis with high-density allelic association data
-
Torkamani A, Schork NJ, (2009) Pathway and network analysis with high-density allelic association data. Methods Mol Biol 563: 289-301.
-
(2009)
Methods Mol Biol
, vol.563
, pp. 289-301
-
-
Torkamani, A.1
Schork, N.J.2
-
9
-
-
38549109487
-
NetworKIN: a resource for exploring cellular phosphorylation networks
-
Linding R, Jensen LJ, Pasculescu A, Olhovsky M, Colwill K, et al. (2008) NetworKIN: a resource for exploring cellular phosphorylation networks. Nucleic Acids Res 36: D695-699.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Linding, R.1
Jensen, L.J.2
Pasculescu, A.3
Olhovsky, M.4
Colwill, K.5
-
10
-
-
0037032835
-
The protein kinase complement of the human genome
-
Manning G, Whyte DB, Martinez R, Hunter T, Sudarsanam S, (2002) The protein kinase complement of the human genome. Science 298: 1912-1934.
-
(2002)
Science
, vol.298
, pp. 1912-1934
-
-
Manning, G.1
Whyte, D.B.2
Martinez, R.3
Hunter, T.4
Sudarsanam, S.5
-
12
-
-
33645018289
-
Protein kinase resource: an integrated environment for phosphorylation research
-
Niedner RH, Buzko OV, Haste NM, Taylor A, Gribskov M, et al. (2006) Protein kinase resource: an integrated environment for phosphorylation research. Proteins 63: 78-86.
-
(2006)
Proteins
, vol.63
, pp. 78-86
-
-
Niedner, R.H.1
Buzko, O.V.2
Haste, N.M.3
Taylor, A.4
Gribskov, M.5
-
13
-
-
58149365542
-
Toward Principles for the Design of Ontologies Used for Knowledge Sharing
-
Gruber T, (1995) Toward Principles for the Design of Ontologies Used for Knowledge Sharing. International Journal Human-Computer Studies 43: 907-928.
-
(1995)
International Journal Human-Computer Studies
, vol.43
, pp. 907-928
-
-
Gruber, T.1
-
14
-
-
77952898461
-
Ontologies in quantitative biology: a basis for comparison, integration, and discovery
-
Jensen LJ, Bork P, (2010) Ontologies in quantitative biology: a basis for comparison, integration, and discovery. PLoS Biol 8: e1000374.
-
(2010)
PLoS Biol
, vol.8
-
-
Jensen, L.J.1
Bork, P.2
-
15
-
-
38049144316
-
Biomedical ontologies: a functional perspective
-
Rubin DL, Shah NH, Noy NF, (2008) Biomedical ontologies: a functional perspective. Brief Bioinform 9: 75-90.
-
(2008)
Brief Bioinform
, vol.9
, pp. 75-90
-
-
Rubin, D.L.1
Shah, N.H.2
Noy, N.F.3
-
16
-
-
35948989284
-
The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration
-
Smith B, Ashburner M, Rosse C, Bard J, Bug W, et al. (2007) The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat Biotechnol 25: 1251-1255.
-
(2007)
Nat Biotechnol
, vol.25
, pp. 1251-1255
-
-
Smith, B.1
Ashburner, M.2
Rosse, C.3
Bard, J.4
Bug, W.5
-
17
-
-
77958590561
-
Ontology-based meta-analysis of global collections of high-throughput public data
-
Kupershmidt I, Su QJ, Grewal A, Sundaresh S, Halperin I, et al. (2010) Ontology-based meta-analysis of global collections of high-throughput public data. PLoS One 5.
-
(2010)
PLoS One
, vol.5
-
-
Kupershmidt, I.1
Su, Q.J.2
Grewal, A.3
Sundaresh, S.4
Halperin, I.5
-
19
-
-
0034069495
-
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25: 25-29.
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
-
20
-
-
22044443709
-
The Sequence Ontology: a tool for the unification of genome annotations
-
Eilbeck K, Lewis SE, Mungall CJ, Yandell M, Stein L, et al. (2005) The Sequence Ontology: a tool for the unification of genome annotations. Genome Biol 6: R44.
-
(2005)
Genome Biol
, vol.6
-
-
Eilbeck, K.1
Lewis, S.E.2
Mungall, C.J.3
Yandell, M.4
Stein, L.5
-
21
-
-
49449097859
-
The PSI-MOD community standard for representation of protein modification data
-
Montecchi-Palazzi L, Beavis R, Binz PA, Chalkley RJ, Cottrell J, et al. (2008) The PSI-MOD community standard for representation of protein modification data. Nat Biotechnol 26: 864-866.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 864-866
-
-
Montecchi-Palazzi, L.1
Beavis, R.2
Binz, P.A.3
Chalkley, R.J.4
Cottrell, J.5
-
22
-
-
78651286167
-
The Protein Ontology: a structured representation of protein forms and complexes
-
Natale DA, Arighi CN, Barker WC, Blake JA, Bult CJ, et al. (2011) The Protein Ontology: a structured representation of protein forms and complexes. Nucleic Acids Res 39: D539-545.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 539-545
-
-
Natale, D.A.1
Arighi, C.N.2
Barker, W.C.3
Blake, J.A.4
Bult, C.J.5
-
23
-
-
17444394521
-
Constructing ontology-driven protein family databases
-
Wolstencroft K, McEntire R, Stevens R, Tabernero L, Brass A, (2005) Constructing ontology-driven protein family databases. Bioinformatics 21: 1685-1692.
-
(2005)
Bioinformatics
, vol.21
, pp. 1685-1692
-
-
Wolstencroft, K.1
McEntire, R.2
Stevens, R.3
Tabernero, L.4
Brass, A.5
-
24
-
-
78651319979
-
Ongoing and future developments at the Universal Protein Resource
-
Consortium U, (2011) Ongoing and future developments at the Universal Protein Resource. Nucleic Acids Res 39: D214-219.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Consortium, U.1
-
25
-
-
75549090603
-
The Pfam protein families database
-
Finn RD, Mistry J, Tate J, Coggill P, Heger A, et al. (2010) The Pfam protein families database. Nucleic Acids Res 38: D211-222.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Finn, R.D.1
Mistry, J.2
Tate, J.3
Coggill, P.4
Heger, A.5
-
26
-
-
78651345652
-
The RCSB Protein Data Bank: redesigned web site and web services
-
Rose PW, Beran B, Bi C, Bluhm WF, Dimitropoulos D, et al. (2011) The RCSB Protein Data Bank: redesigned web site and web services. Nucleic Acids Res 39: D392-401.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Rose, P.W.1
Beran, B.2
Bi, C.3
Bluhm, W.F.4
Dimitropoulos, D.5
-
27
-
-
58149177166
-
Reactome knowledgebase of human biological pathways and processes
-
Matthews L, Gopinath G, Gillespie M, Caudy M, Croft D, et al. (2009) Reactome knowledgebase of human biological pathways and processes. Nucleic Acids Res 37: D619-622.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Matthews, L.1
Gopinath, G.2
Gillespie, M.3
Caudy, M.4
Croft, D.5
-
28
-
-
0029020282
-
Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification
-
Hanks SK, Hunter T, (1995) Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 9: 576-596.
-
(1995)
FASEB J
, vol.9
, pp. 576-596
-
-
Hanks, S.K.1
Hunter, T.2
-
29
-
-
23644452511
-
Did protein kinase regulatory mechanisms evolve through elaboration of a simple structural component?
-
Kannan N, Neuwald AF, (2005) Did protein kinase regulatory mechanisms evolve through elaboration of a simple structural component? J Mol Biol 351: 956-972.
-
(2005)
J Mol Biol
, vol.351
, pp. 956-972
-
-
Kannan, N.1
Neuwald, A.F.2
-
31
-
-
78149467263
-
High frequencies of simultaneous FLT3-ITD, WT1 and KIT mutations in hematological malignancies with NUP98-fusion genes
-
Taketani T, Taki T, Nakamura T, Kobayashi Y, Ito E, et al. (2010) High frequencies of simultaneous FLT3-ITD, WT1 and KIT mutations in hematological malignancies with NUP98-fusion genes. Leukemia 24: 1975-1977.
-
(2010)
Leukemia
, vol.24
, pp. 1975-1977
-
-
Taketani, T.1
Taki, T.2
Nakamura, T.3
Kobayashi, Y.4
Ito, E.5
-
32
-
-
77957738175
-
New insights into the mechanisms of hematopoietic cell transformation by activated receptor tyrosine kinases
-
Toffalini F, Demoulin JB, (2010) New insights into the mechanisms of hematopoietic cell transformation by activated receptor tyrosine kinases. Blood 116: 2429-2437.
-
(2010)
Blood
, vol.116
, pp. 2429-2437
-
-
Toffalini, F.1
Demoulin, J.B.2
|