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Volumn 61, Issue 12, 2011, Pages 2874-2879

Pedobacter rhizosphaerae sp. nov. and Pedobacter soli sp. nov., isolated from rhizosphere soil of Chinese cabbage (Brassica campestris)

Author keywords

[No Author keywords available]

Indexed keywords

FATTY ACID; GENOMIC DNA; RNA 16S;

EID: 83055185718     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.026781-0     Document Type: Article
Times cited : (33)

References (27)
  • 1
    • 0000754708 scopus 로고
    • Physicochemical factors in growth
    • pp, Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
    • Breznak, J. A. & Costilow, R. N. (1994). Physicochemical factors in growth. In Methods for General and Molecular Bacteriology, pp. 137-154. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
    • (1994) Methods For General and Molecular Bacteriology , pp. 137-154
    • Breznak, J.A.1    Costilow, R.N.2
  • 2
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • Chun, J., Lee, J. H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2259-2261
    • Chun, J.1    Lee, J.H.2    Jung, Y.3    Kim, M.4    Kim, S.5    Kim, B.K.6    Lim, Y.W.7
  • 3
    • 0018828401 scopus 로고
    • A simple test for flexirubin-type pigments
    • Fautz, E. & Reichenbach, H. (1980). A simple test for flexirubin-type pigments. FEMS Microbiol Lett 8, 87-91
    • (1980) FEMS Microbiol Lett , vol.8 , pp. 87-91
    • Fautz, E.1    Reichenbach, H.2
  • 4
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 5
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 6
    • 33747887963 scopus 로고    scopus 로고
    • Pedobacter aquatilis sp. nov., isolated from drinking water, and emended description of the genus Pedobacter
    • Gallego, V., García, M. T. & Ventosa, A. (2006). Pedobacter aquatilis sp. nov., isolated from drinking water, and emended description of the genus Pedobacter. Int J Syst Evol Microbiol 56, 1853-1858
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 1853-1858
    • Gallego, V.1    García, M.T.2    Ventosa, A.3
  • 7
    • 69449091602 scopus 로고    scopus 로고
    • Pedobacter nyackensis sp. nov., Pedobacter alluvionis sp. nov. and Pedobacter borealis sp. nov., isolated from Montana flood-plain sediment and forest soil
    • Gordon, N. S., Valenzuela, A., Adams, S. M., Ramsey, P. W., Pollock, J. L., Holben, W. E. & Gannon, J. E. (2009). Pedobacter nyackensis sp. nov., Pedobacter alluvionis sp. nov. and Pedobacter borealis sp. nov., isolated from Montana flood-plain sediment and forest soil. Int J Syst Evol Microbiol 59, 1720-1726
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 1720-1726
    • Gordon, N.S.1    Valenzuela, A.2    Adams, S.M.3    Ramsey, P.W.4    Pollock, J.L.5    Holben, W.E.6    Gannon, J.E.7
  • 8
    • 0030045573 scopus 로고    scopus 로고
    • Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall
    • Groth, I., Schumann, P., Weiss, N., Martin, K. & Rainey, F. A. (1996). Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall. Int J Syst Bacteriol 46, 234-239
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 234-239
    • Groth, I.1    Schumann, P.2    Weiss, N.3    Martin, K.4    Rainey, F.A.5
  • 9
    • 0026455131 scopus 로고
    • Direct automated sequencing of 16S rDNA amplified by polymerase chain reaction from bacterial cultures without DNA purification
    • Hiraishi, A. (1992). Direct automated sequencing of 16S rDNA amplified by polymerase chain reaction from bacterial cultures without DNA purification. Lett Appl Microbiol 15, 210-213
    • (1992) Lett Appl Microbiol , vol.15 , pp. 210-213
    • Hiraishi, A.1
  • 10
    • 33747883185 scopus 로고    scopus 로고
    • Pedobacter roseus sp. nov., isolated from a hypertrophic pond, and emended description of the genus Pedobacter
    • Hwang, C. Y., Choi, D. H. & Cho, B. C. (2006). Pedobacter roseus sp. nov., isolated from a hypertrophic pond, and emended description of the genus Pedobacter. Int J Syst Evol Microbiol 56, 1831-1836
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 1831-1836
    • Hwang, C.Y.1    Choi, D.H.2    Cho, B.C.3
  • 11
    • 0021234719 scopus 로고
    • A plate method for demonstrating the breakdown of heparin and chondroitin sulfate by bacteria
    • Joubert, J. J., van Rensburg, E. J. & Pitout, M. J. (1984). A plate method for demonstrating the breakdown of heparin and chondroitin sulfate by bacteria. Microbiol Methods 2, 197-202
    • (1984) Microbiol Methods , vol.2 , pp. 197-202
    • Joubert, J.J.1    van Rensburg, E.J.2    Pitout, M.J.3
  • 13
    • 0037215982 scopus 로고    scopus 로고
    • Pseudomonas koreensis sp. nov., Pseudomonas umsongensis sp. nov. and Pseudomonas jinjuensis sp. nov., novel species from farm soils in Korea
    • Kwon, S. W., Kim, J. S., Park, I. C., Yoon, S. H., Park, D. H., Lim, C. K. & Go, S. J. (2003). Pseudomonas koreensis sp. nov., Pseudomonas umsongensis sp. nov. and Pseudomonas jinjuensis sp. nov., novel species from farm soils in Korea. Int J Syst Evol Microbiol 53, 21-27
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 21-27
    • Kwon, S.W.1    Kim, J.S.2    Park, I.C.3    Yoon, S.H.4    Park, D.H.5    Lim, C.K.6    Go, S.J.7
  • 14
  • 15
    • 0141502490 scopus 로고    scopus 로고
    • Pedobacter cryoconitis sp. nov., a facultative psychrophile from alpine glacier cryoconite
    • Margesin, R., Spröer, C., Schumann, P. & Schinner, F. (2003). Pedobacter cryoconitis sp. nov., a facultative psychrophile from alpine glacier cryoconite. Int J Syst Evol Microbiol 53, 1291-1296
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 1291-1296
    • Margesin, R.1    Spröer, C.2    Schumann, P.3    Schinner, F.4
  • 16
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 19
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 20
    • 0021928234 scopus 로고
    • Deoxyribonucleic acid homology among Bacillus polymyxa, Bacillus macerans, Bacillus azotofixans, and other nitrogen-fixing Bacillus strains
    • Seldin, L. & Dubnau, D. (1985). Deoxyribonucleic acid homology among Bacillus polymyxa, Bacillus macerans, Bacillus azotofixans, and other nitrogen-fixing Bacillus strains. Int J Syst Bacteriol 35, 151-154
    • (1985) Int J Syst Bacteriol , vol.35 , pp. 151-154
    • Seldin, L.1    Dubnau, D.2
  • 22
    • 0000612080 scopus 로고
    • Phenotypic characterization
    • pp, Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
    • Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654 Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
    • (1994) In Methods For General and Molecular Bacteriology , pp. 607-654
    • Smibert, R.M.1    Krieg, N.R.2
  • 23
    • 0031894349 scopus 로고    scopus 로고
    • Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphingobacteriaceae fam. nov
    • Steyn, P. L., Segers, P., Vancanneyt, M., Sandra, P., Kersters, K. & Joubert, J. J. (1998). Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphingobacteriaceae fam. nov. Int J Syst Bacteriol 48, 165-177
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 165-177
    • Steyn, P.L.1    Segers, P.2    Vancanneyt, M.3    Sandra, P.4    Kersters, K.5    Joubert, J.J.6
  • 24
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 25
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 27
    • 36549083635 scopus 로고    scopus 로고
    • Pedobacter terrae sp. nov., isolated from soil
    • Yoon, J. H., Kang, S. J. & Oh, T. K. (2007). Pedobacter terrae sp. nov., isolated from soil. Int J Syst Evol Microbiol 57, 2462-2466.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2462-2466
    • Yoon, J.H.1    Kang, S.J.2    Oh, T.K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.