-
1
-
-
8644251891
-
Comprehensive cross-clade neutralization analysis of a panel of anti-human immunodeficiency virus type 1 monoclonal antibodies
-
Binley JM, Wrin T, Korber B, Zwick MB, Wang M, et al. (2004) Comprehensive cross-clade neutralization analysis of a panel of anti-human immunodeficiency virus type 1 monoclonal antibodies. J Virol 78: 13232-13252.
-
(2004)
J Virol
, vol.78
, pp. 13232-13252
-
-
Binley, J.M.1
Wrin, T.2
Korber, B.3
Zwick, M.B.4
Wang, M.5
-
2
-
-
33745785048
-
Cross-clade neutralizing activity of human anti-V3 monoclonal antibodies derived from the cells of individuals infected with non-B clades of HIV-1
-
Gorny MK, Williams C, Volsky B, Revesz K, Wang XH, et al. (2006) Cross-clade neutralizing activity of human anti-V3 monoclonal antibodies derived from the cells of individuals infected with non-B clades of HIV-1. J Virol 80: 6865-6872.
-
(2006)
J Virol
, vol.80
, pp. 6865-6872
-
-
Gorny, M.K.1
Williams, C.2
Volsky, B.3
Revesz, K.4
Wang, X.H.5
-
3
-
-
77649318846
-
Analysis of memory B cell responses and isolation of novel monoclonal antibodies with neutralizing breadth from HIV-1-infected individuals
-
Corti D, Langedijk JP, Hinz A, Seaman MS, Vanzetta F, et al. (2010) Analysis of memory B cell responses and isolation of novel monoclonal antibodies with neutralizing breadth from HIV-1-infected individuals. PLoS One 5: e8805.
-
(2010)
PLoS One
, vol.5
-
-
Corti, D.1
Langedijk, J.P.2
Hinz, A.3
Seaman, M.S.4
Vanzetta, F.5
-
4
-
-
77954110431
-
Anti-V3 monoclonal antibodies display broad neutralizing activities against multiple HIV-1 subtypes
-
Hioe CE, Wrin T, Seaman MS, Yu X, Wood B, et al. (2010) Anti-V3 monoclonal antibodies display broad neutralizing activities against multiple HIV-1 subtypes. PLoS One 5: e10254.
-
(2010)
PLoS One
, vol.5
-
-
Hioe, C.E.1
Wrin, T.2
Seaman, M.S.3
Yu, X.4
Wood, B.5
-
5
-
-
0028116653
-
Neutralization of primary human immunodeficiency virus type 1 isolates by the broadly reactive anti-V3 monoclonal antibody, 447-52D
-
Conley AJ, Gorny MK, Kessler JA 2nd, Boots LJ, Ossorio-Castro M, et al. (1994) Neutralization of primary human immunodeficiency virus type 1 isolates by the broadly reactive anti-V3 monoclonal antibody, 447-52D. J Virol 68: 6994-7000.
-
(1994)
J Virol
, vol.68
, pp. 6994-7000
-
-
Conley, A.J.1
Gorny, M.K.2
Kessler II, J.A.3
Boots, L.J.4
Ossorio-Castro, M.5
-
6
-
-
0026557112
-
Prevention of HIV-1 infection in chimpanzees by gp120 V3 domain-specific monoclonal antibody
-
Emini EA, Schleif WA, Nunberg JH, Conley AJ, Eda Y, et al. (1992) Prevention of HIV-1 infection in chimpanzees by gp120 V3 domain-specific monoclonal antibody. Nature 355: 728-730.
-
(1992)
Nature
, vol.355
, pp. 728-730
-
-
Emini, E.A.1
Schleif, W.A.2
Nunberg, J.H.3
Conley, A.J.4
Eda, Y.5
-
7
-
-
0031968725
-
Passive immunization with a human immunodeficiency virus type-1 neutralizing monoclonal antibody in Hu-PBL-SCID mice: Isolation of a neutralization escape variant
-
Andrus L, Prince AM, Bernal I, McCormack P, Lee DH, et al. (1998) Passive immunization with a human immunodeficiency virus type-1 neutralizing monoclonal antibody in Hu-PBL-SCID mice: Isolation of a neutralization escape variant. J Infect Dis 177: 889-897.
-
(1998)
J Infect Dis
, vol.177
, pp. 889-897
-
-
Andrus, L.1
Prince, A.M.2
Bernal, I.3
McCormack, P.4
Lee, D.H.5
-
8
-
-
33646723290
-
Anti-V3 humanized antibody KD-247 effectively suppresses ex vivo generation of human immunodeficiency virus type 1 and affords sterile protection of monkeys against a heterologous simian/human immunodeficiency virus infection
-
Eda Y, Murakami T, Ami Y, Nakasone T, Takizawa M, et al. (2006) Anti-V3 humanized antibody KD-247 effectively suppresses ex vivo generation of human immunodeficiency virus type 1 and affords sterile protection of monkeys against a heterologous simian/human immunodeficiency virus infection. J Virol 80: 5563-5570.
-
(2006)
J Virol
, vol.80
, pp. 5563-5570
-
-
Eda, Y.1
Murakami, T.2
Ami, Y.3
Nakasone, T.4
Takizawa, M.5
-
9
-
-
59249105235
-
Preferential use of the VH5-51 gene segment by the human immune response to code for antibodies against the V3 domain of HIV-1
-
Gorny MK, Wang XH, Williams C, Volsky B, Revesz K, et al. (2009) Preferential use of the VH5-51 gene segment by the human immune response to code for antibodies against the V3 domain of HIV-1. Mol Immunol 46: 917-926.
-
(2009)
Mol Immunol
, vol.46
, pp. 917-926
-
-
Gorny, M.K.1
Wang, X.H.2
Williams, C.3
Volsky, B.4
Revesz, K.5
-
10
-
-
12144290520
-
Structural basis of tyrosine sulfation and VH-gene usage in antibodies that recognize the HIV type 1 coreceptor-binding site on gp120
-
Huang CC, Venturi M, Majeed S, Moore MJ, Phogat S, et al. (2004) Structural basis of tyrosine sulfation and VH-gene usage in antibodies that recognize the HIV type 1 coreceptor-binding site on gp120. Proc Natl Acad Sci U S A 101: 2706-2711.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 2706-2711
-
-
Huang, C.C.1
Venturi, M.2
Majeed, S.3
Moore, M.J.4
Phogat, S.5
-
11
-
-
0042163216
-
Molecular ontogeny of the human antibody repertoire to the Haemophilus influenzae type B polysaccharide: expression of canonical variable regions and their variants in vaccinated infants
-
Lucas AH, McLean GR, Reason DC, O'Connor AP, Felton MC, et al. (2003) Molecular ontogeny of the human antibody repertoire to the Haemophilus influenzae type B polysaccharide: expression of canonical variable regions and their variants in vaccinated infants. Clin Immunol 108: 119-127.
-
(2003)
Clin Immunol
, vol.108
, pp. 119-127
-
-
Lucas, A.H.1
McLean, G.R.2
Reason, D.C.3
O'Connor, A.P.4
Felton, M.C.5
-
12
-
-
0142242098
-
Infant and adult human B cell responses to rotavirus share common immunodominant variable gene repertoires
-
Weitkamp JH, Kallewaard N, Kusuhara K, Bures E, Williams JV, et al. (2003) Infant and adult human B cell responses to rotavirus share common immunodominant variable gene repertoires. J Immunol 171: 4680-4688.
-
(2003)
J Immunol
, vol.171
, pp. 4680-4688
-
-
Weitkamp, J.H.1
Kallewaard, N.2
Kusuhara, K.3
Bures, E.4
Williams, J.V.5
-
13
-
-
0027398669
-
Fine specificity of the human immune response to the major neutralization epitopes expressed on cytomegalovirus gp58/116 (gB), as determined with human monoclonal antibodies
-
Ohlin M, Sundqvist VA, Mach M, Wahren B, Borrebaeck CA, (1993) Fine specificity of the human immune response to the major neutralization epitopes expressed on cytomegalovirus gp58/116 (gB), as determined with human monoclonal antibodies. J Virol 67: 703-710.
-
(1993)
J Virol
, vol.67
, pp. 703-710
-
-
Ohlin, M.1
Sundqvist, V.A.2
Mach, M.3
Wahren, B.4
Borrebaeck, C.A.5
-
14
-
-
17044437827
-
Recognition of human cytomegalovirus by human primary immunoglobulins identifies an innate foundation to an adaptive immune response
-
McLean GR, Olsen OA, Watt IN, Rathanaswami P, Leslie KB, et al. (2005) Recognition of human cytomegalovirus by human primary immunoglobulins identifies an innate foundation to an adaptive immune response. J Immunol 174: 4768-4778.
-
(2005)
J Immunol
, vol.174
, pp. 4768-4778
-
-
McLean, G.R.1
Olsen, O.A.2
Watt, I.N.3
Rathanaswami, P.4
Leslie, K.B.5
-
15
-
-
53549108576
-
Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus
-
Thomson CA, Bryson S, McLean GR, Creagh AL, Pai EF, et al. (2008) Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus. Embo J 27: 2592-2602.
-
(2008)
Embo J
, vol.27
, pp. 2592-2602
-
-
Thomson, C.A.1
Bryson, S.2
McLean, G.R.3
Creagh, A.L.4
Pai, E.F.5
-
16
-
-
33847278450
-
Autoreactivity in human IgG+ memory B cells
-
Tiller T, Tsuiji M, Yurasov S, Velinzon K, Nussenzweig MC, et al. (2007) Autoreactivity in human IgG+ memory B cells. Immunity 26: 205-213.
-
(2007)
Immunity
, vol.26
, pp. 205-213
-
-
Tiller, T.1
Tsuiji, M.2
Yurasov, S.3
Velinzon, K.4
Nussenzweig, M.C.5
-
17
-
-
77955417928
-
Conserved Structural Elements in the V3 Crown of HIV-1 GP120
-
Jiang X, Burke V, Totrov M, Williams C, Cardozo T, et al. (2010) Conserved Structural Elements in the V3 Crown of HIV-1 GP120. Nat Struct Mol Biol 17: 955-961.
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 955-961
-
-
Jiang, X.1
Burke, V.2
Totrov, M.3
Williams, C.4
Cardozo, T.5
-
18
-
-
33744933182
-
Crystal structures of HIV-1 neutralizing antibody 2219 in complex with three different V3 peptides reveal a new binding mode for HIV-1 cross-reactivity
-
Stanfield RL, Gorny MK, Zolla-Pazner S, Wilson IA, (2006) Crystal structures of HIV-1 neutralizing antibody 2219 in complex with three different V3 peptides reveal a new binding mode for HIV-1 cross-reactivity. J Virol 80: 6093-6105.
-
(2006)
J Virol
, vol.80
, pp. 6093-6105
-
-
Stanfield, R.L.1
Gorny, M.K.2
Zolla-Pazner, S.3
Wilson, I.A.4
-
19
-
-
84986522918
-
ICM-A new method for protein modeling and design: Applications to docking and structure prediction from the distorted native conformation
-
Abagyan R, Totrov M, Kuznetsov D, (1994) ICM-A new method for protein modeling and design: Applications to docking and structure prediction from the distorted native conformation. J Compu Chemistry 15: 488-506.
-
(1994)
J Compu Chemistry
, vol.15
, pp. 488-506
-
-
Abagyan, R.1
Totrov, M.2
Kuznetsov, D.3
-
20
-
-
78650413957
-
Circular permutation: a different way to engineer enzyme structure and function
-
Yu Y, Lutz S, (2011) Circular permutation: a different way to engineer enzyme structure and function. Trends Biotechnol 29: 18-25.
-
(2011)
Trends Biotechnol
, vol.29
, pp. 18-25
-
-
Yu, Y.1
Lutz, S.2
-
21
-
-
70350714115
-
Structural Basis of the Cross-Reactivity of Genetically Related Human Anti-HIV-1 Monoclonal Antibodies: Implications for Design of V3-based Immunogens
-
Burke V, Williams C, Sukumaran M, Kim S-S, Li H, et al. (2009) Structural Basis of the Cross-Reactivity of Genetically Related Human Anti-HIV-1 Monoclonal Antibodies: Implications for Design of V3-based Immunogens. Structure 17: 1538-1546.
-
(2009)
Structure
, vol.17
, pp. 1538-1546
-
-
Burke, V.1
Williams, C.2
Sukumaran, M.3
Kim, S.-S.4
Li, H.5
-
22
-
-
0037227422
-
Analysis of the antigen combining site: correlations between length and sequence composition of the hypervariable loops and the nature of the antigen
-
Collis AV, Brouwer AP, Martin AC, (2003) Analysis of the antigen combining site: correlations between length and sequence composition of the hypervariable loops and the nature of the antigen. J Mol Biol 325: 337-354.
-
(2003)
J Mol Biol
, vol.325
, pp. 337-354
-
-
Collis, A.V.1
Brouwer, A.P.2
Martin, A.C.3
-
23
-
-
0023278330
-
Canonical structures for the hypervariable regions of immunoglobulins
-
Chothia C, Lesk AM, (1987) Canonical structures for the hypervariable regions of immunoglobulins. J Mol Biol 196: 901-917.
-
(1987)
J Mol Biol
, vol.196
, pp. 901-917
-
-
Chothia, C.1
Lesk, A.M.2
-
24
-
-
0024844388
-
Conformations of immunoglobulin hypervariable regions
-
Chothia C, Lesk AM, Tramontano A, Levitt M, Smith-Gill SJ, et al. (1989) Conformations of immunoglobulin hypervariable regions. Nature 342: 877-883.
-
(1989)
Nature
, vol.342
, pp. 877-883
-
-
Chothia, C.1
Lesk, A.M.2
Tramontano, A.3
Levitt, M.4
Smith-Gill, S.J.5
-
25
-
-
34547207674
-
Broadly neutralizing anti-hepatitis B virus antibody reveals a complementarity determining region H3 lid-opening mechanism
-
Chi SW, Maeng CY, Kim SJ, Oh MS, Ryu CJ, et al. (2007) Broadly neutralizing anti-hepatitis B virus antibody reveals a complementarity determining region H3 lid-opening mechanism. Proc Natl Acad Sci U S A 104: 9230-9235.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 9230-9235
-
-
Chi, S.W.1
Maeng, C.Y.2
Kim, S.J.3
Oh, M.S.4
Ryu, C.J.5
-
26
-
-
0027918179
-
Major antigen-induced domain rearrangements in an antibody
-
Stanfield RL, Takimoto-Kamimura M, Rini JM, Profy AT, Wilson IA, (1993) Major antigen-induced domain rearrangements in an antibody. Structure 1: 83-93.
-
(1993)
Structure
, vol.1
, pp. 83-93
-
-
Stanfield, R.L.1
Takimoto-Kamimura, M.2
Rini, J.M.3
Profy, A.T.4
Wilson, I.A.5
-
27
-
-
0033711628
-
Diversity in the CDR3 region of V(H) is sufficient for most antibody specificities
-
Xu JL, Davis MM, (2000) Diversity in the CDR3 region of V(H) is sufficient for most antibody specificities. Immunity 13: 37-45.
-
(2000)
Immunity
, vol.13
, pp. 37-45
-
-
Xu, J.L.1
Davis, M.M.2
-
28
-
-
7444256675
-
The evolutionary and structural 'logic' of antigen receptor diversity
-
Davis MM, (2004) The evolutionary and structural 'logic' of antigen receptor diversity. Semin Immunol 16: 239-243.
-
(2004)
Semin Immunol
, vol.16
, pp. 239-243
-
-
Davis, M.M.1
-
29
-
-
69249210887
-
Cross-clade neutralizing antibodies against HIVI-1 induced in rabbits by focusing the immune response on a neutralizing epitope
-
Zolla-Pazner S, Cohen S, Pinter A, Krachmarov C, Wrin T, et al. (2009) Cross-clade neutralizing antibodies against HIVI-1 induced in rabbits by focusing the immune response on a neutralizing epitope. Virology 392: 82-93.
-
(2009)
Virology
, vol.392
, pp. 82-93
-
-
Zolla-Pazner, S.1
Cohen, S.2
Pinter, A.3
Krachmarov, C.4
Wrin, T.5
-
30
-
-
80053952246
-
Cross-Clade HIV-1 Neutralizing Antibodies Induced with V3-Scaffold Protein Immunogens Following Priming with gp120 DNA
-
Zolla-Pazner S, Kong X, Jiang X, Cardozo T, Nadas A, et al. (2011) Cross-Clade HIV-1 Neutralizing Antibodies Induced with V3-Scaffold Protein Immunogens Following Priming with gp120 DNA. J Virol 85: 9887-9898.
-
(2011)
J Virol
, vol.85
, pp. 9887-9898
-
-
Zolla-Pazner, S.1
Kong, X.2
Jiang, X.3
Cardozo, T.4
Nadas, A.5
-
31
-
-
0026356679
-
Production of site-selected neutralizing human monoclonal antibodies against the third variable domain of the HIV-1 envelope glycoprotein
-
Gorny MK, Xu J-Y, Gianakakos V, Karwowska S, Williams C, et al. (1991) Production of site-selected neutralizing human monoclonal antibodies against the third variable domain of the HIV-1 envelope glycoprotein. Proc Natl Acad Sci USA 88: 3238-3242.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 3238-3242
-
-
Gorny, M.K.1
Xu, J.-Y.2
Gianakakos, V.3
Karwowska, S.4
Williams, C.5
-
32
-
-
0027311936
-
Repertoire of neutralizing human monoclonal antibodies specific for the V3 domain of HIV-1 gp120
-
Gorny MK, Xu J-Y, Karwowska S, Buchbinder A, Zolla-Pazner S, (1993) Repertoire of neutralizing human monoclonal antibodies specific for the V3 domain of HIV-1 gp120. J Immunol 150: 635-643.
-
(1993)
J Immunol
, vol.150
, pp. 635-643
-
-
Gorny, M.K.1
Xu, J.-Y.2
Karwowska, S.3
Buchbinder, A.4
Zolla-Pazner, S.5
-
33
-
-
0031573212
-
Human monoclonal antibodies to the V3 loop of HIV-1 with intra- and interclade cross-reactivity
-
Gorny MK, VanCott TC, Hioe C, Israel ZR, Michael NL, et al. (1997) Human monoclonal antibodies to the V3 loop of HIV-1 with intra- and interclade cross-reactivity. J Immunol 159: 5114-5122.
-
(1997)
J Immunol
, vol.159
, pp. 5114-5122
-
-
Gorny, M.K.1
VanCott, T.C.2
Hioe, C.3
Israel, Z.R.4
Michael, N.L.5
-
34
-
-
0036720793
-
Human monoclonal antibodies specific for conformation-sensitive epitopes of V3 neutralize HIV-1 primary isolates from various clades
-
Gorny MK, Williams C, Volsky B, Revesz K, Cohen S, et al. (2002) Human monoclonal antibodies specific for conformation-sensitive epitopes of V3 neutralize HIV-1 primary isolates from various clades. J Virol 76: 9035-9045.
-
(2002)
J Virol
, vol.76
, pp. 9035-9045
-
-
Gorny, M.K.1
Williams, C.2
Volsky, B.3
Revesz, K.4
Cohen, S.5
-
35
-
-
10744228558
-
The V3 Loop Is Accessible on the Surface of Most Human Immunodeficiency Virus Type 1 Primary Isolates and Serves as a Neutralization Epitope
-
Gorny MK, Revesz K, Williams C, Volsky B, Louder MK, et al. (2004) The V3 Loop Is Accessible on the Surface of Most Human Immunodeficiency Virus Type 1 Primary Isolates and Serves as a Neutralization Epitope. J Virol 78: 2394-2404.
-
(2004)
J Virol
, vol.78
, pp. 2394-2404
-
-
Gorny, M.K.1
Revesz, K.2
Williams, C.3
Volsky, B.4
Louder, M.K.5
-
36
-
-
0005534134
-
Production of human monoclonal antibodies via fusion of Epstein-Barr virus-transformed lymphocytes with heteromyeloma
-
In: Celis JE, editors, Academic Press
-
Gorny MK, (1994) Production of human monoclonal antibodies via fusion of Epstein-Barr virus-transformed lymphocytes with heteromyeloma. In: Celis JE, editors. In: "Cell Biology: A Laboratory Handbook" Academic Press pp. 276-281.
-
(1994)
Cell Biology: A Laboratory Handbook
, pp. 276-281
-
-
Gorny, M.K.1
-
37
-
-
0018817283
-
Preparation of Fab fragments from IgGs of different animal species
-
Mage MG, (1980) Preparation of Fab fragments from IgGs of different animal species. Methods Enzymol 70: 142-150.
-
(1980)
Methods Enzymol
, vol.70
, pp. 142-150
-
-
Mage, M.G.1
-
38
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, et al. (1998) Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr D Biol Crystallogr 54: 905-921.
-
(1998)
Acta Crystallogr D Biol Crystallogr
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
-
39
-
-
0032078747
-
A translation-function approach for heavy-atom location in macromolecular crystallography
-
Vagin A, Teplyakov A, (1998) A translation-function approach for heavy-atom location in macromolecular crystallography. Acta Crystallogr D Biol Crystallogr 54: 400-402.
-
(1998)
Acta Crystallogr D Biol Crystallogr
, vol.54
, pp. 400-402
-
-
Vagin, A.1
Teplyakov, A.2
-
40
-
-
0035182073
-
Use of TLS parameters to model anisotropic displacements in macromolecular refinement
-
Winn MD, Isupov MN, Murshudov GN, (2001) Use of TLS parameters to model anisotropic displacements in macromolecular refinement. Acta Crystallogr D Biol Crystallogr 57: 122-133.
-
(2001)
Acta Crystallogr D Biol Crystallogr
, vol.57
, pp. 122-133
-
-
Winn, M.D.1
Isupov, M.N.2
Murshudov, G.N.3
|