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Volumn 106, Issue , 2011, Pages 65-88

Genome Engineering by Transgene-Instructed Gene Conversion in C. elegans

Author keywords

Cosuppression; Forward genetics; Recombination; Transgene; Transgenic line; Transposase

Indexed keywords


EID: 82355181656     PISSN: 0091679X     EISSN: None     Source Type: Book Series    
DOI: 10.1016/B978-0-12-544172-8.00003-7     Document Type: Chapter
Times cited : (5)

References (48)
  • 1
    • 16544367296 scopus 로고    scopus 로고
    • Targeted gene alteration in Caenorhabditis elegans by gene conversion
    • Barrett P.L., Fleming J.T., Gobel V. Targeted gene alteration in Caenorhabditis elegans by gene conversion. Nat. Genet. 2004, 36:1231-1237.
    • (2004) Nat. Genet. , vol.36 , pp. 1231-1237
    • Barrett, P.L.1    Fleming, J.T.2    Gobel, V.3
  • 2
    • 70349983047 scopus 로고    scopus 로고
    • The NemaGENETAG initiative: Large scale transposon insertion gene-tagging in Caenorhabditis elegans
    • Bazopoulou D., Tavernarakis N. The NemaGENETAG initiative: Large scale transposon insertion gene-tagging in Caenorhabditis elegans. Genetica 2009, 137:39-46.
    • (2009) Genetica , vol.137 , pp. 39-46
    • Bazopoulou, D.1    Tavernarakis, N.2
  • 3
    • 2342559295 scopus 로고    scopus 로고
    • Homologous gene targeting in Caenorhabditis elegans by biolistic transformation
    • Berezikov E., Bargmann C.I., Plasterk R.H. Homologous gene targeting in Caenorhabditis elegans by biolistic transformation. Nucleic Acids Res. 2004, 32:e40.
    • (2004) Nucleic Acids Res. , vol.32
    • Berezikov, E.1    Bargmann, C.I.2    Plasterk, R.H.3
  • 4
    • 22344439386 scopus 로고    scopus 로고
    • The C. elegans homolog of the mammalian stumor suppressor Dep-1/Scc1 inhibits EGFR signaling to regulate binary cell fate decisions
    • Berset T.A., Hoier E.F., Hajnal A. The C. elegans homolog of the mammalian stumor suppressor Dep-1/Scc1 inhibits EGFR signaling to regulate binary cell fate decisions. Genes Dev. 2005, 19:1328-1340.
    • (2005) Genes Dev. , vol.19 , pp. 1328-1340
    • Berset, T.A.1    Hoier, E.F.2    Hajnal, A.3
  • 5
    • 33750131455 scopus 로고    scopus 로고
    • Insertional mutagenesis in C. elegans using the Drosophila transposon Mos1: A method for the rapid identification of mutated genes
    • Bessereau J.L. Insertional mutagenesis in C. elegans using the Drosophila transposon Mos1: A method for the rapid identification of mutated genes. Methods Mol. Biol. 2006, 351:59-73.
    • (2006) Methods Mol. Biol. , vol.351 , pp. 59-73
    • Bessereau, J.L.1
  • 7
    • 34250158063 scopus 로고    scopus 로고
    • Mos1-mediated insertional mutagenesis in Caenorhabditis elegans
    • Boulin T., Bessereau J.L. Mos1-mediated insertional mutagenesis in Caenorhabditis elegans. Nat. Protoc. 2007, 2:1276-1287.
    • (2007) Nat. Protoc. , vol.2 , pp. 1276-1287
    • Boulin, T.1    Bessereau, J.L.2
  • 8
    • 0027175868 scopus 로고
    • Alteration of Caenorhabditis elegans gene expression by targeted transformation
    • Broverman S., MacMorris M., Blumenthal T. Alteration of Caenorhabditis elegans gene expression by targeted transformation. Proc. Natl. Acad. Sci. U.S.A. 1993, 90:4359-4363.
    • (1993) Proc. Natl. Acad. Sci. U.S.A. , vol.90 , pp. 4359-4363
    • Broverman, S.1    MacMorris, M.2    Blumenthal, T.3
  • 9
    • 4444241998 scopus 로고    scopus 로고
    • A conserved protein network controls assembly of the outer kinetochore and its ability to sustain tension
    • Cheeseman I.M., Niessen S., Anderson S., Hyndman F., Yates J.R., Oegema K., Desai A. A conserved protein network controls assembly of the outer kinetochore and its ability to sustain tension. Genes Dev. 2004, 18:2255-2268.
    • (2004) Genes Dev. , vol.18 , pp. 2255-2268
    • Cheeseman, I.M.1    Niessen, S.2    Anderson, S.3    Hyndman, F.4    Yates, J.R.5    Oegema, K.6    Desai, A.7
  • 12
    • 33846908058 scopus 로고    scopus 로고
    • A semi-automated high-throughput approach to the generation of transposon insertion mutants in the nematode Caenorhabditis elegans
    • Duverger Y., Belougne J., Scaglione S., Brandli D., Beclin C., Ewbank J.J. A semi-automated high-throughput approach to the generation of transposon insertion mutants in the nematode Caenorhabditis elegans. Nucleic Acids Res. 2007, 35:e11.
    • (2007) Nucleic Acids Res. , vol.35
    • Duverger, Y.1    Belougne, J.2    Scaglione, S.3    Brandli, D.4    Beclin, C.5    Ewbank, J.J.6
  • 13
    • 85064306324 scopus 로고    scopus 로고
    • Evans, T. C., ed. Transformation and microinjection (April 6), WormBook, ed. The C. elegans Research Community, WormBook, doi/10.1895/wormbook.1.108.1
    • Evans, T. C., ed. Transformation and microinjection (April 6, 2006), WormBook, ed. The C. elegans Research Community, WormBook, doi/10.1895/wormbook.1.108.1, http://www.wormbook.org/.
    • (2006)
  • 16
    • 70350061382 scopus 로고    scopus 로고
    • A secreted complement-control-related protein ensures acetylcholine receptor clustering
    • Gendrel M., Rapti G., Richmond J.E., Bessereau J.L. A secreted complement-control-related protein ensures acetylcholine receptor clustering. Nature 2009, 461:992-996.
    • (2009) Nature , vol.461 , pp. 992-996
    • Gendrel, M.1    Rapti, G.2    Richmond, J.E.3    Bessereau, J.L.4
  • 19
    • 0035108963 scopus 로고    scopus 로고
    • Discovery of the transposable element mariner
    • Hartl D. Discovery of the transposable element mariner. Genetics 2001, 157:471-476.
    • (2001) Genetics , vol.157 , pp. 471-476
    • Hartl, D.1
  • 20
    • 0036214657 scopus 로고    scopus 로고
    • PCR fusion-based approach to create reporter gene constructs for expression analysis in transgenic C. elegans
    • Hobert O. PCR fusion-based approach to create reporter gene constructs for expression analysis in transgenic C. elegans. Biotechniques 2002, 32:728-730.
    • (2002) Biotechniques , vol.32 , pp. 728-730
    • Hobert, O.1
  • 21
    • 0022115272 scopus 로고
    • Coupled instability of two X-linked genes in Drosophila mauritiana: Germinal and somatic mutability
    • Jacobson J.W., Hartl D.L. Coupled instability of two X-linked genes in Drosophila mauritiana: Germinal and somatic mutability. Genetics 1985, 111:57-65.
    • (1985) Genetics , vol.111 , pp. 57-65
    • Jacobson, J.W.1    Hartl, D.L.2
  • 22
    • 0011704558 scopus 로고
    • Molecular structure of a somatically unstable transposable element in Drosophila
    • Jacobson J.W., Medhora M.M., Hartl D.L. Molecular structure of a somatically unstable transposable element in Drosophila. Proc. Natl. Acad. Sci. U. S. A. 1986, 83:8684-8688.
    • (1986) Proc. Natl. Acad. Sci. U. S. A. , vol.83 , pp. 8684-8688
    • Jacobson, J.W.1    Medhora, M.M.2    Hartl, D.L.3
  • 23
    • 4444378999 scopus 로고    scopus 로고
    • Targeted gene knockout reveals a role in meiotic recombination for ZHP-3, a Zip3-related protein in Caenorhabditis elegans
    • Jantsch V., Pasierbek P., Mueller M.M., Schweizer D., Jantsch M., Loidl J. Targeted gene knockout reveals a role in meiotic recombination for ZHP-3, a Zip3-related protein in Caenorhabditis elegans. Mol. Cell Biol. 2004, 24:7998-8006.
    • (2004) Mol. Cell Biol. , vol.24 , pp. 7998-8006
    • Jantsch, V.1    Pasierbek, P.2    Mueller, M.M.3    Schweizer, D.4    Jantsch, M.5    Loidl, J.6
  • 24
    • 0030903160 scopus 로고    scopus 로고
    • Distinct requirements for somatic and germline expression of a generally expressed Caernorhabditis elegans gene
    • Kelly W.G., Xu S., Montgomery M.K., Fire A. Distinct requirements for somatic and germline expression of a generally expressed Caernorhabditis elegans gene. Genetics 1997, 146:227-238.
    • (1997) Genetics , vol.146 , pp. 227-238
    • Kelly, W.G.1    Xu, S.2    Montgomery, M.K.3    Fire, A.4
  • 25
    • 0032739015 scopus 로고    scopus 로고
    • Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD
    • Ketting R.F., Haverkamp T.H., van Luenen H.G., Plasterk R.H. Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD. Cell 1999, 99:133-141.
    • (1999) Cell , vol.99 , pp. 133-141
    • Ketting, R.F.1    Haverkamp, T.H.2    van Luenen, H.G.3    Plasterk, R.H.4
  • 26
    • 0034673645 scopus 로고    scopus 로고
    • A genetic link between co-suppression and RNA interference in C. elegans
    • Ketting R.F., Plasterk R.H. A genetic link between co-suppression and RNA interference in C. elegans. Nature 2000, 404:296-298.
    • (2000) Nature , vol.404 , pp. 296-298
    • Ketting, R.F.1    Plasterk, R.H.2
  • 29
    • 0025942107 scopus 로고
    • Efficient gene transfer in C. elegans: Extrachromosomal maintenance and integration of transforming sequences
    • Mello C.C., Kramer J.M., Stinchcomb D., Ambros V. Efficient gene transfer in C. elegans: Extrachromosomal maintenance and integration of transforming sequences. EMBO J. 1991, 10:3959-3970.
    • (1991) EMBO J. , vol.10 , pp. 3959-3970
    • Mello, C.C.1    Kramer, J.M.2    Stinchcomb, D.3    Ambros, V.4
  • 30
    • 53249143880 scopus 로고    scopus 로고
    • 3' UTRs are the primary regulators of gene expression in the C. elegans germline
    • Merritt C., Rasoloson D., Ko D., Seydoux G. 3' UTRs are the primary regulators of gene expression in the C. elegans germline. Curr. Biol. 2008, 18:1476-1482.
    • (2008) Curr. Biol. , vol.18 , pp. 1476-1482
    • Merritt, C.1    Rasoloson, D.2    Ko, D.3    Seydoux, G.4
  • 31
    • 0025230558 scopus 로고
    • DNA damage promotes jumping between templates during enzymatic amplification
    • Paabo S., Irwin D.M., Wilson A.C. DNA damage promotes jumping between templates during enzymatic amplification. J. Biol. Chem. 1990, 265:4718-4721.
    • (1990) J. Biol. Chem. , vol.265 , pp. 4718-4721
    • Paabo, S.1    Irwin, D.M.2    Wilson, A.C.3
  • 32
    • 73949104382 scopus 로고    scopus 로고
    • RNA recognition by the embryonic cell fate determinant and germline totipotency factor MEX-3
    • Pagano J.M., Farley B.M., Essien K.I., Ryder S.P. RNA recognition by the embryonic cell fate determinant and germline totipotency factor MEX-3. Proc. Natl. Acad. Sci. U. S. A. 2009, 106:20252-20257.
    • (2009) Proc. Natl. Acad. Sci. U. S. A. , vol.106 , pp. 20252-20257
    • Pagano, J.M.1    Farley, B.M.2    Essien, K.I.3    Ryder, S.P.4
  • 33
    • 0025911348 scopus 로고
    • The origin of footprints of the Tc1 transposon of Caenorhabditis elegans
    • Plasterk R.H. The origin of footprints of the Tc1 transposon of Caenorhabditis elegans. EMBO J. 1991, 10:1919-1925.
    • (1991) EMBO J. , vol.10 , pp. 1919-1925
    • Plasterk, R.H.1
  • 34
    • 0026526771 scopus 로고
    • Targeted alterations of the Caenorhabditis elegans genome by transgene instructed DNA double strand break repair following Tc1 excision
    • Plasterk R.H., Groenen J.T. Targeted alterations of the Caenorhabditis elegans genome by transgene instructed DNA double strand break repair following Tc1 excision. EMBO J. 1992, 11:287-290.
    • (1992) EMBO J. , vol.11 , pp. 287-290
    • Plasterk, R.H.1    Groenen, J.T.2
  • 35
    • 0035099902 scopus 로고    scopus 로고
    • Creation of low-copy integrated transgenic lines in Caenorhabditis elegans
    • Praitis V., Casey E., Collar D., Austin J. Creation of low-copy integrated transgenic lines in Caenorhabditis elegans. Genetics 2001, 157:1217-1226.
    • (2001) Genetics , vol.157 , pp. 1217-1226
    • Praitis, V.1    Casey, E.2    Collar, D.3    Austin, J.4
  • 36
    • 20444489625 scopus 로고    scopus 로고
    • SMA-1 spectrin has essential roles in epithelial cell sheet morphogenesis in C. elegans
    • Praitis V., Ciccone E., Austin J. SMA-1 spectrin has essential roles in epithelial cell sheet morphogenesis in C. elegans. Dev. Biol. 2005, 283:157-170.
    • (2005) Dev. Biol. , vol.283 , pp. 157-170
    • Praitis, V.1    Ciccone, E.2    Austin, J.3
  • 37
    • 33846230103 scopus 로고    scopus 로고
    • Targeted engineering of the Caenorhabditis elegans genome following Mos1-triggered chromosomal breaks
    • Robert V., Bessereau J.L. Targeted engineering of the Caenorhabditis elegans genome following Mos1-triggered chromosomal breaks. EMBO J. 2007, 26:170-183.
    • (2007) EMBO J. , vol.26 , pp. 170-183
    • Robert, V.1    Bessereau, J.L.2
  • 38
    • 55049130260 scopus 로고    scopus 로고
    • Gene conversion and end-joining-repair double-strand breaks in the Caenorhabditis elegans germline
    • Robert V.J., Davis M.W., Jorgensen E.M., Bessereau J.L. Gene conversion and end-joining-repair double-strand breaks in the Caenorhabditis elegans germline. Genetics 2008, 180:673-679.
    • (2008) Genetics , vol.180 , pp. 673-679
    • Robert, V.J.1    Davis, M.W.2    Jorgensen, E.M.3    Bessereau, J.L.4
  • 39
    • 70349779593 scopus 로고    scopus 로고
    • Mos1 transposition as a tool to engineer the Caenorhabditis elegans genome by homologous recombination
    • Robert V.J., Katic I., Bessereau J.L. Mos1 transposition as a tool to engineer the Caenorhabditis elegans genome by homologous recombination. Methods 2009, 49:263-269.
    • (2009) Methods , vol.49 , pp. 263-269
    • Robert, V.J.1    Katic, I.2    Bessereau, J.L.3
  • 40
    • 17044417320 scopus 로고    scopus 로고
    • Chromatin and RNAi factors protect the C. elegans germline against repetitive sequences
    • Robert V.J., Sijen T., van Wolfswinkel J., Plasterk R.H. Chromatin and RNAi factors protect the C. elegans germline against repetitive sequences. Genes Dev. 2005, 19:782-787.
    • (2005) Genes Dev. , vol.19 , pp. 782-787
    • Robert, V.J.1    Sijen, T.2    van Wolfswinkel, J.3    Plasterk, R.H.4
  • 41
    • 0009453976 scopus 로고
    • Replacement of chromosome segments with altered DNA sequences constructed in vitro
    • Scherer S., Davis R.W. Replacement of chromosome segments with altered DNA sequences constructed in vitro. Proc. Natl. Acad. Sci. U. S. A. 1979, 76:4951-4955.
    • (1979) Proc. Natl. Acad. Sci. U. S. A. , vol.76 , pp. 4951-4955
    • Scherer, S.1    Davis, R.W.2
  • 42
    • 0345306117 scopus 로고    scopus 로고
    • Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi
    • Sijen T., Plasterk R.H. Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi. Nature 2003, 426:310-314.
    • (2003) Nature , vol.426 , pp. 310-314
    • Sijen, T.1    Plasterk, R.H.2
  • 43
    • 38449085292 scopus 로고    scopus 로고
    • Maintenance of C. elegans (February 11)
    • WormBook, ed. The C. elegans Research Community, WormBook, doi/10.1895/wormbook.1.101.1
    • Stiernagle, T. Maintenance of C. elegans (February 11, 2006), WormBook, ed. The C. elegans Research Community, WormBook, doi/10.1895/wormbook.1.101.1, http://www.wormbook.org/.
    • (2006)
    • Stiernagle, T.1
  • 44
    • 0022348755 scopus 로고
    • Extrachromosomal DNA transformation of Caenorhabditis elegans
    • Stinchcomb D.T., Shaw J.E., Carr S.H., Hirsh D. Extrachromosomal DNA transformation of Caenorhabditis elegans. Mol. Cell Biol. 1985, 5:3484-3496.
    • (1985) Mol. Cell Biol. , vol.5 , pp. 3484-3496
    • Stinchcomb, D.T.1    Shaw, J.E.2    Carr, S.H.3    Hirsh, D.4
  • 45
    • 0023646810 scopus 로고
    • Site-directed mutagenesis by gene targeting in mouse embryo-derived stem cells
    • Thomas K.R., Capecchi M.R. Site-directed mutagenesis by gene targeting in mouse embryo-derived stem cells. Cell 1987, 51:503-512.
    • (1987) Cell , vol.51 , pp. 503-512
    • Thomas, K.R.1    Capecchi, M.R.2
  • 46
    • 72049115765 scopus 로고    scopus 로고
    • Improved gene targeting in C. elegans using counter-selection and Flp-mediated marker excision
    • Vazquez-Manrique R.P., Legg J.C., Olofsson B., Ly S., Baylis H.A. Improved gene targeting in C. elegans using counter-selection and Flp-mediated marker excision. Genomics 2010, 95:37-46.
    • (2010) Genomics , vol.95 , pp. 37-46
    • Vazquez-Manrique, R.P.1    Legg, J.C.2    Olofsson, B.3    Ly, S.4    Baylis, H.A.5
  • 47
    • 17444383389 scopus 로고    scopus 로고
    • Characterization of Mos1-mediated mutagenesis in Caenorhabditis elegans: A method for the rapid identification of mutated genes
    • Williams D.C., Boulin T., Ruaud A.F., Jorgensen E.M., Bessereau J.L. Characterization of Mos1-mediated mutagenesis in Caenorhabditis elegans: A method for the rapid identification of mutated genes. Genetics 2005, 169:1779-1785.
    • (2005) Genetics , vol.169 , pp. 1779-1785
    • Williams, D.C.1    Boulin, T.2    Ruaud, A.F.3    Jorgensen, E.M.4    Bessereau, J.L.5
  • 48
    • 0033580426 scopus 로고    scopus 로고
    • Ballistic transformation of Caenorhabditis elegans
    • Wilm T., Demel P., Koop H.U., Schnabel H., Schnabel R. Ballistic transformation of Caenorhabditis elegans. Gene 1999, 229:31-35.
    • (1999) Gene , vol.229 , pp. 31-35
    • Wilm, T.1    Demel, P.2    Koop, H.U.3    Schnabel, H.4    Schnabel, R.5


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