-
1
-
-
0014245158
-
Kinetics of biopolymerization on nucleic acid templates
-
MacDonald, C. T., Gibbs, J. H., Pipkin, A. C.: Kinetics of biopolymerization on nucleic acid templates. Biopolymers 6, 1 (1968).
-
(1968)
Biopolymers
, vol.6
, pp. 1
-
-
Macdonald, C.T.1
Gibbs, J.H.2
Pipkin, A.C.3
-
2
-
-
42749107428
-
Totally asymmetric exclusion process with extended objects: a model for protein synthesis
-
02190-1
-
Shaw, L. B., Zia, R. K. P., Lee, K. H.: Totally asymmetric exclusion process with extended objects: a model for protein synthesis. Phys. Rev. E 68, 02190-1 (2003).
-
(2003)
Phys. Rev. E
, vol.68
-
-
Shaw, L.B.1
Zia, R.K.P.2
Lee, K.H.3
-
3
-
-
36148962461
-
Inhomogeneous exclusion processes with extended objects: the effect of defect locations
-
051113
-
Dong, J. J., Schmittmann, B., Zia, R. K. P.: Inhomogeneous exclusion processes with extended objects: the effect of defect locations. Phys. Rev. E 76, 051113 (2007).
-
(2007)
Phys. Rev. E
, vol.76
-
-
Dong, J.J.1
Schmittmann, B.2
Zia, R.K.P.3
-
4
-
-
66049160486
-
Queueing phase transition: theory of translation
-
198104
-
Romano, C. M., Thiel, M., Stansfield, I., Grebogi, C.: Queueing phase transition: theory of translation. Phys. Rev. Lett. 102, 198104 (2009).
-
(2009)
Phys. Rev. Lett.
, vol.102
-
-
Romano, C.M.1
Thiel, M.2
Stansfield, I.3
Grebogi, C.4
-
5
-
-
0042845842
-
Ribosome recycling, diffusion, and mRNA loop formation in translational regulation
-
Chou, T.: Ribosome recycling, diffusion, and mRNA loop formation in translational regulation. Biophys. J. 85, 755 (2003).
-
(2003)
Biophys. J.
, vol.85
, pp. 755
-
-
Chou, T.1
-
6
-
-
36149030302
-
Exact solution of a 1D asymmetric exclusion model using a matrix formulation
-
Derrida, B., Evans, M. R., Hakim, V., Pasquier, V.: Exact solution of a 1D asymmetric exclusion model using a matrix formulation. J. Phys. A 26, 1493 (1993).
-
(1993)
J. Phys. A
, vol.26
, pp. 1493
-
-
Derrida, B.1
Evans, M.R.2
Hakim, V.3
Pasquier, V.4
-
7
-
-
0040629192
-
Phase transitions in an exactly soluble one-dimensional exclusion process
-
Schuetz, G., Domany, E.: Phase transitions in an exactly soluble one-dimensional exclusion process. J. Stat. Phys. 72, 277 (1993).
-
(1993)
J. Stat. Phys.
, vol.72
, pp. 277
-
-
Schuetz, G.1
Domany, E.2
-
8
-
-
60149090021
-
The many pathways of RNA degradation
-
Houseley, J., Tollervey, D.: The many pathways of RNA degradation. Cell 136, 763 (2009).
-
(2009)
Cell
, vol.136
, pp. 763
-
-
Houseley, J.1
Tollervey, D.2
-
9
-
-
15244343863
-
mRNA decay in prokaryotes and eukaryotes: different approaches to a similar problem
-
Kushner, S. R.: mRNA decay in prokaryotes and eukaryotes: different approaches to a similar problem. IUBMB Life 56, 585 (2004).
-
(2004)
IUBMB Life
, vol.56
, pp. 585
-
-
Kushner, S.R.1
-
10
-
-
64049095465
-
Maturation and degradation of ribosomal RNA in bacteria
-
Deutscher, M. P.: Maturation and degradation of ribosomal RNA in bacteria. Prog. Mol. Biol. Transl. Sci. 85, 369 (2009).
-
(2009)
Prog. Mol. Biol. Transl. Sci.
, vol.85
, pp. 369
-
-
Deutscher, M.P.1
-
11
-
-
33750043437
-
Translation initiation and the fate of bacterial mRNAs
-
Kaberdin, V. R., Blaesi, U.: Translation initiation and the fate of bacterial mRNAs. FEMS Microbiol. Rev. 30, 967 (2006).
-
(2006)
FEMS Microbiol. Rev.
, vol.30
, pp. 967
-
-
Kaberdin, V.R.1
Blaesi, U.2
-
12
-
-
77953884287
-
All things must pass: contrasts and commonalities in eukaryotic and bacterial mRNA decay
-
Belasco, J. G.: All things must pass: contrasts and commonalities in eukaryotic and bacterial mRNA decay. Nat. Rev. Mol. Cell Biol. 11, 467 (2010).
-
(2010)
Nat. Rev. Mol. Cell Biol.
, vol.11
, pp. 467
-
-
Belasco, J.G.1
-
13
-
-
34250729202
-
Maturation and degradation of RNA in bacteria
-
Condon, C.: Maturation and degradation of RNA in bacteria. Curr. Opin. Microbiol. 10, 271 (2007).
-
(2007)
Curr. Opin. Microbiol.
, vol.10
, pp. 271
-
-
Condon, C.1
-
14
-
-
70249141564
-
Co-translational mRNA decay in Saccharomyces cerevisiae
-
Hu, W., Sweet, T. J., Chamnongpol, S., Baker, K. E. Coller, J.: Co-translational mRNA decay in Saccharomyces cerevisiae. Nature (London) 461, 225 (2009).
-
(2009)
Nature (London)
, vol.461
, pp. 225
-
-
Hu, W.1
Sweet, T.J.2
Chamnongpol, S.3
Baker, K.E.4
Coller, J.5
-
15
-
-
49349113285
-
Ribosome collisions and translation efficiency: optimization by codon usage and mRNA destabilization
-
Mitarai, N., Sneppen, K., Pederson, S.: Ribosome collisions and translation efficiency: optimization by codon usage and mRNA destabilization. J. Mol. Biol. 382, 236 (2008).
-
(2008)
J. Mol. Biol.
, vol.382
, pp. 236
-
-
Mitarai, N.1
Sneppen, K.2
Pederson, S.3
-
16
-
-
79051470889
-
Turnover of messenger RNA: polysome statistics beyond the steady state
-
Valleriani, A., Ignatova, Z., Nagar, A., Lipowsky, R.: Turnover of messenger RNA: polysome statistics beyond the steady state. Europhys. Lett. 89, 58003 (2010).
-
(2010)
Europhys. Lett.
, vol.89
, pp. 58003
-
-
Valleriani, A.1
Ignatova, Z.2
Nagar, A.3
Lipowsky, R.4
-
17
-
-
79961048104
-
Length-dependent translation of messenger RNA by ribosomes
-
042903
-
Valleriani, A., Zhang, G., Nagar, A., Ignatova, Z., Lipowsky, R.: Length-dependent translation of messenger RNA by ribosomes. Phys. Rev. E 83, 042903 (2011).
-
(2011)
Phys. Rev. E
, vol.83
-
-
Valleriani, A.1
Zhang, G.2
Nagar, A.3
Ignatova, Z.4
Lipowsky, R.5
-
18
-
-
37649026711
-
Exact spectral gaps of the asymmetric exclusion process with open boundaries
-
P12011
-
de Gier, J., Essler, F. H. L.: Exact spectral gaps of the asymmetric exclusion process with open boundaries. J. Stat. Mech. 2006, P12011 (2006).
-
(2006)
J. Stat. Mech.
, vol.2006
-
-
de Gier, J.1
Essler, F.H.L.2
-
19
-
-
0034360327
-
Relaxation spectrum of the asymmetric exclusion process with open boundaries
-
Dudzinski, M., Schuetz, G. M.: Relaxation spectrum of the asymmetric exclusion process with open boundaries. J. Phys. A 33, 8351 (2000).
-
(2000)
J. Phys. A
, vol.33
, pp. 8351
-
-
Dudzinski, M.1
Schuetz, G.M.2
-
20
-
-
0037388094
-
Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae
-
Arava, Y., Wang, Y., Storey, J. D., Jong, C. L., Brown, P. O., Herschlag, D.: Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 100, 3889 (2003).
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 3889
-
-
Arava, Y.1
Wang, Y.2
Storey, J.D.3
Jong, C.L.4
Brown, P.O.5
Herschlag, D.6
-
21
-
-
34948889112
-
Global analyses of mRNA translational control during early Drosophila embryogenesis
-
Qin, X., Ahn, S., Speed, T. P., Rubin, G. M.: Global analyses of mRNA translational control during early Drosophila embryogenesis. Genome Biol. 8, R63 (2007).
-
(2007)
Genome Biol.
, vol.8
-
-
Qin, X.1
Ahn, S.2
Speed, T.P.3
Rubin, G.M.4
-
22
-
-
42949156737
-
A ribosomal density-mapping procedure to explore ribosome positions along translating mRNAs
-
Post-Transcriptional Gene Regulation, J. Wilusz (Ed.), Totowa: Humana Press
-
Eldad, N., Arava, Y.: A ribosomal density-mapping procedure to explore ribosome positions along translating mRNAs. In: Wilusz, J. (ed.) Methods in Molecular Biology. Post-Transcriptional Gene Regulation, vol. 419, p. 231. Humana Press, Totowa (2007).
-
(2007)
Methods in Molecular Biology
, vol.419
, pp. 231
-
-
Eldad, N.1
Arava, Y.2
-
23
-
-
62549134121
-
Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling
-
Ingolia, N. T., Ghaemmaghami, S., Newman, J. R. S., Weissman, J. S.: Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling. Science 324, 218 (2009).
-
(2009)
Science
, vol.324
, pp. 218
-
-
Ingolia, N.T.1
Ghaemmaghami, S.2
Newman, J.R.S.3
Weissman, J.S.4
-
24
-
-
70349330650
-
Ribosomal footprints on a transcriptome landscape
-
Morris, D. R.: Ribosomal footprints on a transcriptome landscape. Genome Biol. 10, 215 (2009).
-
(2009)
Genome Biol.
, vol.10
, pp. 215
-
-
Morris, D.R.1
-
25
-
-
0033368475
-
Messenger RNA stability and its role in control of gene expression in bacteria and phages
-
Grunberg-Manago, M.: Messenger RNA stability and its role in control of gene expression in bacteria and phages. Annu. Rev. Genet. 33, 193 (1999).
-
(1999)
Annu. Rev. Genet.
, vol.33
, pp. 193
-
-
Grunberg-Manago, M.1
-
26
-
-
42049086762
-
Rate and accuracy of bacterial protein synthesis revisited
-
Johannson, M., Lovmar, M., Ehrenberg, M.: Rate and accuracy of bacterial protein synthesis revisited. Curr. Opin. Microbiol. 11, 141 (2008).
-
(2008)
Curr. Opin. Microbiol.
, vol.11
, pp. 141
-
-
Johannson, M.1
Lovmar, M.2
Ehrenberg, M.3
-
27
-
-
0037162469
-
Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
-
Bernstein, J. A., Khodursky, A. B., Lin, P.-H., Lin-Chao, S. Cohen, S. N.: Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc. Natl. Acad. Sci. USA 99, 9697 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 9697
-
-
Bernstein, J.A.1
Khodursky, A.B.2
Lin, P.-H.3
Lin-Chao, S.4
Cohen, S.N.5
-
28
-
-
0038756088
-
Cooperation between RNA polymerase molecules in transcription elongation
-
Epshtein, V., Nudler, E.: Cooperation between RNA polymerase molecules in transcription elongation. Science 300, 801 (2003).
-
(2003)
Science
, vol.300
, pp. 801
-
-
Epshtein, V.1
Nudler, E.2
-
29
-
-
0037470280
-
Totally asymmetric exclusion processes with particles of arbitrary size
-
Lakatos, G., Chou, T.: Totally asymmetric exclusion processes with particles of arbitrary size. J. Phys. A, Math. Gen. 36, 2027 (2003).
-
(2003)
J. Phys. A, Math. Gen.
, vol.36
, pp. 2027
-
-
Lakatos, G.1
Chou, T.2
-
30
-
-
77951715627
-
An evolutionarily conserved mechanism for controlling the efficiency of protein translation
-
Tuller, T., Carmi, A., et al.: An evolutionarily conserved mechanism for controlling the efficiency of protein translation. Cell 141, 344 (2010).
-
(2010)
Cell
, vol.141
, pp. 344
-
-
Tuller, T.1
Carmi, A.2
|