Conserved domains, conserved residues, and surface cavities of C-reactive protein (CRP)

Applied Biochemistry and Biotechnology

Volumn 165, Issue 2, 2011, Pages 497-505

  Kumar, Suggula Varun ^a   Ravunny, Roshini Kulampurathu ^a   Chakraborty, Chiranjib ^a  

^a VIT UNIVERSITY   (India)

Author keywords

C reactive protein (CRP); Conserved domains; Conserved residues; Surface cavities

Indexed keywords

ACUTE MYOCARDIAL INFARCTION; BIOINFORMATICS ANALYSIS; C-REACTIVE PROTEINS; CARDIOPROTECTION; CONSERVED RESIDUES; DRUG DISCOVERY; EVOLUTIONARY RELATIONSHIPS; NEUROPROTECTION; PLASMA PROTEIN; PROINFLAMMATORY; SURFACE CAVITIES; SURFACE CAVITY; THREE-DIMENSIONAL STRUCTURE;

BIOINFORMATICS; ISOMERS; PROTEINS;

SURFACE STRUCTURE;

C REACTIVE PROTEIN;

ARTICLE; HUMAN; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; THREE DIMENSIONAL IMAGING;

AMINO ACID SEQUENCE; ANIMALS; C-REACTIVE PROTEIN; CARDIOTONIC AGENTS; COMPUTATIONAL BIOLOGY; CONSERVED SEQUENCE; DRUG DISCOVERY; EVOLUTION, MOLECULAR; HUMANS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MYOCARDIAL INFARCTION; NEUROPROTECTIVE AGENTS; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; PROTEOMICS; STROKE;

EID: 81455154646     PISSN: 02732289     EISSN: 15590291     Source Type: Journal    
DOI: 10.1007/s12010-011-9270-7     Document Type: Article

References (40)

1. Pepys, M. B., & Baltz, M. L. (1983). Advances in Immunology, 34, 141-212.
2. Pepys, M. B. (1995). In D. J. Weatherall, J. G. G. Ledingham, & D. A. Warrell (Eds.), Oxford textbook of medicine (3rd ed., pp. 1527-1533). Oxford: Oxford University Press.
3. Garlanda, C., Bottazzi, B., Bastone, A., & Mantovani, A. (2005). Ann Rev Immunol, 23, 337-366.
4. Du Clos, T. W., & Mold, C. (2004). Immunologic Research, 30, 261-277.
5. Hirshfeld, G. M., & Pepys, M. B. (2003). The Quarterly Journal of Medicine, 96, 793-807.
6. Arici, M., & Walls, J. (2001). Kidney International, 59, 407-414.
7. Pepys, M. B., Lanham, J. G., & De Beer, F. C. (1982). Clinics in Rheumatic Diseases, 8, 91-103.
8. Pasceri, V., Willerson, J. T., & Yeh, E. T. (2000). Circulation, 102, 2165-2168.
9. Wadham, C., Albanese, N., Roberts, J., Wang, L., Bagley, C. J., Gamble, J. R., et al. (2004). Circulation, 109, 2116-2122.
10. Pepys, M. B., & Hirschfield, G. M. (2003). Journal of Clinical Investigation, 111, 1805-1812.
11. Yasojima, K., Schwab, C., McGeer, E. G., & McGeer, P. L. (2000). Brain Research, 887, 80-89.
12. Pepys, M. B., Dash, A. C., Fletcher, T. C., Richardson, N., Munn, E. A., & Feinstein, A. (1978). Nature, 273, 168-170.
13. Pepys, M. B. (1994). In M. M. Frank, K. F. Austen, H. N. Claman, & E. R. Unanue (Eds.), Samter's immunologic diseases (5th ed., pp. 637-655). Boston: Little, Brown and Company.
14. Pepys, M. B., Booth, D. R., Hutchinson, W. L., Gallimore, J. R., Collins, P. M., & Hohenester, E. (1997). Amyloid Int J Exp Clin Invest, 4, 274-295.
15. Wheeler, D. L., Barrett, T., Benson, D. A., Bryant, S. H., Canese, K., Chetvernin, V., et al. (2007). Nucleic Acids Research, 35, D5-D12.
16. Ashkenazy, H., Erez, E., Martz, E., Pupko, T., & Ben-Tal, N. (2010). Nucleic Acids Research, 38, W529-W533.
17. Glaser, F., Pupko, T., Paz, I., Bell, R. E., Bechor-Shental, D., Martz, E., et al. (2003). Bioinformatics, 19, 163-164.
18. DeLano WL (2002) The PyMOL molecular graphics system. Available from: http://www.pymol.org.
19. Dereeper, A., Guignon, V., Blanc, G., Audic, S., Buffet, S., Chevenet, F., et al. (2008). Nucleic Acids Research, 36, W465-W469.
20. Schneider, T. D., & Stephens, R. M. (1990). Nucleic Acids Research, 18, 6097-6100.
21. Crooks, G. E., Hon, G., Chandonia, J. M., & Brenner, S. E. (2004). Genome Research, 14, 1188-1190.
22. Black, S., Kushner, I., & Samols, D. (2004). The Journal of Biological Chemistry, 279, 48487-48490.
23. Sinico, R. A., Radice, A., Ikehata, M., Giammarresi, G., Corace, C., Arrigo, G., et al. (2005). Annals of the New York Academy of Sciences, 1050, 193-200.
24. Marto, N., Bertolaccini, M. L., Calabuig, E., Hughes, G. R., & Khamashta, M. A. (2005). Annals of the Rheumatic Diseases, 64, 444-448.
25. Aziz, N., Fahey, J. L., Detels, R., & Butch, A. W. (2003). Clinical and Diagnostic Laboratory Immunology, 10, 652-657.
26. Martinez de la Torre, Y., Fabbri, M., Jaillon, S., Bastone, A., Nebuloni, M., Vecchi, A., et al. (2010). Journal of Immunology, 184, 5055-5064.
27. Volanakis, J. E., & Kaplan, M. H. (1971). Proceedings of the Society for Experimental Biology and Medicine, 136, 612-614.
28. Thompson, D., Pepys, M. B., & Wood, S. P. (1999). Structure, 7, 169-177.
29. Marchler-Bauer, A., Anderson, J. B., Cherukuri, P. F., DeWeese-Scott, C., Geer, L. Y., Gwadz, M., et al. (2005). Nucleic Acids Research, 33, D192-D196.
30. Branden, C., & Tooze, J. (1999). Introduction to Protein Structure (2nd ed.). New York: Garland Publication.
31. Magor, B. G., & Magor, K. E. (2001). Developmental and Comparative Immunology, 25, 651-682.
32. Tharia, H. A., Shrive, A. K., Mills, J. D., Arme, C., Williams, G. T., & Greenhough, T. J. (2002). Journal of Molecular Biology, 316, 583-597.
33. Srinivasan, N., White, H. E., Emsley, J., Wood, S. P., Pepys, M. B., & Blundell, T. L. (1994). Structure, 2, 1017-1027.
34. Svehag, S. E., Manhem, L., & Bloth, B. (1972). Nature, 238, 117-118.
35. Agrawal, A., & Volanakis, J. E. (1994). Journal of Immunology, 152, 5404-5410.
36. Agrawal, A., Shrive, A. K., Greenhough, T. J., & Volanakis, J. E. (2001). Journal of Immunology, 166, 3998-4004.
37. Gaboriaud, C., Juanhuix, J., Gruez, A., Lacroix, M., Darnault, C., Pignol, D., et al. (2003). The Journal of Biological Chemistry, 278, 46974-46982.
38. Black, S., Agrawal, A., & Samols, D. (2003). Molecular Immunology, 39, 1045-1054.
39. Ashton, A. W., Boehm, M. K., Gallimore, J. R., Pepys, M. B., & Perkins, S. J. (1997). Journal of Molecular Biology, 272, 408-422.
40. Pepys, M. B., Hirschfield, G. M., Tennent, G. A., Gallimore, J. R., Kahan, M. C., Bellotti, V., et al. (2006). Nature, 440, 1217-1221.