메뉴 건너뛰기




Volumn 6, Issue 11, 2011, Pages

DNA methylation profiles of primary colorectal carcinoma and matched liver metastasis

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGED; ARTICLE; CDH1 GENE; CDH13 GENE; COLORECTAL CARCINOMA; CONTROLLED STUDY; DNA METHYLATION; DNA MICROARRAY; ER ALPHA GENE; FEMALE; GENE AMPLIFICATION; GENE IDENTIFICATION; GENE MUTATION; GENE SILENCING; GENETIC ASSOCIATION; HPP1 GENE; HUMAN; HUMAN TISSUE; LIVER METASTASIS; MAJOR CLINICAL STUDY; MALE; METASTASIS POTENTIAL; METHYLATED CPG ISLAND AMPLIFICATION MICROARRAY; MGMT GENE; MINT1 GENE; MINT2 GENE; MINT31 GENE; MLH1 GENE; P14 GENE; PYROSEQUENCING; THBS1 GENE; TIMP3 GENE; TUMOR GENE; TUMOR SUPPRESSOR GENE; COLORECTAL TUMOR; CPG ISLAND; GENE EXPRESSION REGULATION; GENETICS; HUMAN GENOME; LIVER TUMOR; METASTASIS; MIDDLE AGED; NUCLEOTIDE SEQUENCE; TUMOR CELL LINE;

EID: 81455125557     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0027889     Document Type: Article
Times cited : (34)

References (40)
  • 3
    • 0030592517 scopus 로고    scopus 로고
    • Lessons from hereditary colorectal cancer
    • Kinzler KW, Vogelstein B, (1996) Lessons from hereditary colorectal cancer. Cell 87: 159-170.
    • (1996) Cell , vol.87 , pp. 159-170
    • Kinzler, K.W.1    Vogelstein, B.2
  • 4
    • 36749025213 scopus 로고    scopus 로고
    • Integrated genetic and epigenetic analysis identifies three different subclasses of colon cancer
    • Shen L, Toyota M, Kondo Y, Lin E, Zhang L, et al. (2007) Integrated genetic and epigenetic analysis identifies three different subclasses of colon cancer. Proc Natl Acad Sci U S A 104: 18654-18659.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 18654-18659
    • Shen, L.1    Toyota, M.2    Kondo, Y.3    Lin, E.4    Zhang, L.5
  • 5
    • 52049085300 scopus 로고    scopus 로고
    • Epigenetic-genetic interactions in the APC/WNT, RAS/RAF, and P53 pathways in colorectal carcinoma
    • Suehiro Y, Wong CW, Chirieac LR, Kondo Y, Shen L, et al. (2008) Epigenetic-genetic interactions in the APC/WNT, RAS/RAF, and P53 pathways in colorectal carcinoma. Clin Cancer Res 14: 2560-2569.
    • (2008) Clin Cancer Res , vol.14 , pp. 2560-2569
    • Suehiro, Y.1    Wong, C.W.2    Chirieac, L.R.3    Kondo, Y.4    Shen, L.5
  • 6
    • 0026782390 scopus 로고
    • Regulation of tumor cell growth at organ-specific metastases
    • Radinsky R, Fidler IJ, (1992) Regulation of tumor cell growth at organ-specific metastases. In Vivo 6: 325-331.
    • (1992) In Vivo , vol.6 , pp. 325-331
    • Radinsky, R.1    Fidler, I.J.2
  • 7
    • 33748286796 scopus 로고    scopus 로고
    • A signature of chromosomal instability inferred from gene expression profiles predicts clinical outcome in multiple human cancers
    • Carter SL, Eklund AC, Kohane IS, Harris LN, Szallasi Z, (2006) A signature of chromosomal instability inferred from gene expression profiles predicts clinical outcome in multiple human cancers. Nat Genet 38: 1043-1048.
    • (2006) Nat Genet , vol.38 , pp. 1043-1048
    • Carter, S.L.1    Eklund, A.C.2    Kohane, I.S.3    Harris, L.N.4    Szallasi, Z.5
  • 8
    • 0035863495 scopus 로고    scopus 로고
    • K-ras and p16 aberrations confer poor prognosis in human colorectal cancer
    • Esteller M, Gonzalez S, Risques RA, Marcuello E, Mangues R, et al. (2001) K-ras and p16 aberrations confer poor prognosis in human colorectal cancer. J Clin Oncol 19: 299-304.
    • (2001) J Clin Oncol , vol.19 , pp. 299-304
    • Esteller, M.1    Gonzalez, S.2    Risques, R.A.3    Marcuello, E.4    Mangues, R.5
  • 9
    • 20244368982 scopus 로고    scopus 로고
    • Low microsatellite instability is associated with poor prognosis in stage C colon cancer
    • Kohonen-Corish MR, Daniel JJ, Chan C, Lin BP, Kwun SY, et al. (2005) Low microsatellite instability is associated with poor prognosis in stage C colon cancer. J Clin Oncol 23: 2318-2324.
    • (2005) J Clin Oncol , vol.23 , pp. 2318-2324
    • Kohonen-Corish, M.R.1    Daniel, J.J.2    Chan, C.3    Lin, B.P.4    Kwun, S.Y.5
  • 10
    • 34247638013 scopus 로고    scopus 로고
    • CpG island methylation, response to combination chemotherapy, and patient survival in advanced microsatellite stable colorectal carcinoma
    • Ogino S, Meyerhardt JA, Kawasaki T, Clark JW, Ryan DP, et al. (2007) CpG island methylation, response to combination chemotherapy, and patient survival in advanced microsatellite stable colorectal carcinoma. Virchows Arch 450: 529-537.
    • (2007) Virchows Arch , vol.450 , pp. 529-537
    • Ogino, S.1    Meyerhardt, J.A.2    Kawasaki, T.3    Clark, J.W.4    Ryan, D.P.5
  • 11
    • 35948981194 scopus 로고    scopus 로고
    • Association between DNA methylation and shortened survival in patients with advanced colorectal cancer treated with 5-fluorouracil based chemotherapy
    • Shen L, Catalano PJ, Benson AB 3rd, O'Dwyer P, Hamilton SR, et al. (2007) Association between DNA methylation and shortened survival in patients with advanced colorectal cancer treated with 5-fluorouracil based chemotherapy. Clin Cancer Res 13: 6093-6098.
    • (2007) Clin Cancer Res , vol.13 , pp. 6093-6098
    • Shen, L.1    Catalano, P.J.2    Benson III, A.B.3    O'Dwyer, P.4    Hamilton, S.R.5
  • 12
    • 0041524111 scopus 로고    scopus 로고
    • CpG island methylator phenotype is an independent predictor of survival benefit from 5-fluorouracil in stage III colorectal cancer
    • Van Rijnsoever M, Elsaleh H, Joseph D, McCaul K, Iacopetta B, (2003) CpG island methylator phenotype is an independent predictor of survival benefit from 5-fluorouracil in stage III colorectal cancer. Clin Cancer Res 9: 2898-2903.
    • (2003) Clin Cancer Res , vol.9 , pp. 2898-2903
    • van Rijnsoever, M.1    Elsaleh, H.2    Joseph, D.3    McCaul, K.4    Iacopetta, B.5
  • 13
    • 0142087630 scopus 로고    scopus 로고
    • Adverse prognostic effect of methylation in colorectal cancer is reversed by microsatellite instability
    • Ward RL, Cheong K, Ku SL, Meagher A, O'Connor T, et al. (2003) Adverse prognostic effect of methylation in colorectal cancer is reversed by microsatellite instability. J Clin Oncol 21: 3729-3736.
    • (2003) J Clin Oncol , vol.21 , pp. 3729-3736
    • Ward, R.L.1    Cheong, K.2    Ku, S.L.3    Meagher, A.4    O'Connor, T.5
  • 14
    • 0037285935 scopus 로고    scopus 로고
    • A comparison of magnifying and nonmagnifying colonoscopy for diagnosis of colorectal polyps: A prospective study
    • Konishi K, Kaneko K, Kurahashi T, Yamamoto T, Kushima M, et al. (2003) A comparison of magnifying and nonmagnifying colonoscopy for diagnosis of colorectal polyps: A prospective study. Gastrointest Endosc 57: 48-53.
    • (2003) Gastrointest Endosc , vol.57 , pp. 48-53
    • Konishi, K.1    Kaneko, K.2    Kurahashi, T.3    Yamamoto, T.4    Kushima, M.5
  • 16
    • 0038678777 scopus 로고    scopus 로고
    • Sensitive and quantitative universal Pyrosequencing methylation analysis of CpG sites
    • Colella S, Shen L, Baggerly KA, Issa JP, Krahe R, (2003) Sensitive and quantitative universal Pyrosequencing methylation analysis of CpG sites. Biotechniques 35: 146-150.
    • (2003) Biotechniques , vol.35 , pp. 146-150
    • Colella, S.1    Shen, L.2    Baggerly, K.A.3    Issa, J.P.4    Krahe, R.5
  • 17
    • 34247273521 scopus 로고    scopus 로고
    • Rare CpG island methylator phenotype in ulcerative colitis-associated neoplasias
    • Konishi K, Shen L, Wang S, Meltzer SJ, Harpaz N, et al. (2007) Rare CpG island methylator phenotype in ulcerative colitis-associated neoplasias. Gastroenterology 132: 1254-1260.
    • (2007) Gastroenterology , vol.132 , pp. 1254-1260
    • Konishi, K.1    Shen, L.2    Wang, S.3    Meltzer, S.J.4    Harpaz, N.5
  • 18
    • 0037372967 scopus 로고    scopus 로고
    • P14 methylation in human colon cancer is associated with microsatellite instability and wild-type p53
    • Shen L, Kondo Y, Hamilton SR, Rashid A, Issa JP, (2003) P14 methylation in human colon cancer is associated with microsatellite instability and wild-type p53. Gastroenterology 124: 626-633.
    • (2003) Gastroenterology , vol.124 , pp. 626-633
    • Shen, L.1    Kondo, Y.2    Hamilton, S.R.3    Rashid, A.4    Issa, J.P.5
  • 19
    • 0030904714 scopus 로고    scopus 로고
    • TIMP-3 mRNA expression is regionally increased in moderately and poorly differentiated colorectal adenocarcinoma
    • Powe DG, Brough JL, Carter GI, Bailey EM, Stetler-Stevenson WG, et al. (1997) TIMP-3 mRNA expression is regionally increased in moderately and poorly differentiated colorectal adenocarcinoma. Br J Cancer 75: 1678-1683.
    • (1997) Br J Cancer , vol.75 , pp. 1678-1683
    • Powe, D.G.1    Brough, J.L.2    Carter, G.I.3    Bailey, E.M.4    Stetler-Stevenson, W.G.5
  • 20
    • 0027685701 scopus 로고
    • Cadherins in cancer: implications for invasion and metastasis
    • Takeichi M, (1993) Cadherins in cancer: implications for invasion and metastasis. Curr Opin Cell Biol 5: 806-811.
    • (1993) Curr Opin Cell Biol , vol.5 , pp. 806-811
    • Takeichi, M.1
  • 21
    • 0037096946 scopus 로고    scopus 로고
    • Aberrant methylation of the CDH13 (H-cadherin) promoter region in colorectal cancers and adenomas
    • Toyooka S, Toyooka KO, Harada K, Miyajima K, Makarla P, et al. (2002) Aberrant methylation of the CDH13 (H-cadherin) promoter region in colorectal cancers and adenomas. Cancer Res 62: 3382-3386.
    • (2002) Cancer Res , vol.62 , pp. 3382-3386
    • Toyooka, S.1    Toyooka, K.O.2    Harada, K.3    Miyajima, K.4    Makarla, P.5
  • 22
    • 0033609371 scopus 로고    scopus 로고
    • Methylation and silencing of the Thrombospondin-1 promoter in human cancer
    • Li Q, Ahuja N, Burger PC, Issa JP, (1999) Methylation and silencing of the Thrombospondin-1 promoter in human cancer. Oncogene 18: 3284-3289.
    • (1999) Oncogene , vol.18 , pp. 3284-3289
    • Li, Q.1    Ahuja, N.2    Burger, P.C.3    Issa, J.P.4
  • 23
    • 25144518262 scopus 로고    scopus 로고
    • MGMT promoter methylation and field defect in sporadic colorectal cancer
    • Shen L, Kondo Y, Rosner GL, Xiao L, Hernandez NS, et al. (2005) MGMT promoter methylation and field defect in sporadic colorectal cancer. J Natl Cancer Inst 97: 1330-1338.
    • (2005) J Natl Cancer Inst , vol.97 , pp. 1330-1338
    • Shen, L.1    Kondo, Y.2    Rosner, G.L.3    Xiao, L.4    Hernandez, N.S.5
  • 24
    • 0028001087 scopus 로고
    • Methylation of the oestrogen receptor CpG island links ageing and neoplasia in human colon
    • Issa JP, Ottaviano YL, Celano P, Hamilton SR, Davidson NE, et al. (1994) Methylation of the oestrogen receptor CpG island links ageing and neoplasia in human colon. Nat Genet 7: 536-540.
    • (1994) Nat Genet , vol.7 , pp. 536-540
    • Issa, J.P.1    Ottaviano, Y.L.2    Celano, P.3    Hamilton, S.R.4    Davidson, N.E.5
  • 26
    • 0032145440 scopus 로고    scopus 로고
    • Molecular genetic characterization of BRCA1- and BRCA2-linked hereditary ovarian cancers
    • Rhei E, Bogomolniy F, Federici MG, Maresco DL, Offit K, et al. (1998) Molecular genetic characterization of BRCA1- and BRCA2-linked hereditary ovarian cancers. Cancer Res 58: 3193-3196.
    • (1998) Cancer Res , vol.58 , pp. 3193-3196
    • Rhei, E.1    Bogomolniy, F.2    Federici, M.G.3    Maresco, D.L.4    Offit, K.5
  • 27
    • 0034681117 scopus 로고    scopus 로고
    • Distinct genetic profiles in colorectal tumors with or without the CpG island methylator phenotype
    • Toyota M, Ohe-Toyota M, Ahuja N, Issa JP, (2000) Distinct genetic profiles in colorectal tumors with or without the CpG island methylator phenotype. Proc Natl Acad Sci U S A 97: 710-715.
    • (2000) Proc Natl Acad Sci U S A , vol.97 , pp. 710-715
    • Toyota, M.1    Ohe-Toyota, M.2    Ahuja, N.3    Issa, J.P.4
  • 28
    • 0033563165 scopus 로고    scopus 로고
    • Identification of differentially methylated sequences in colorectal cancer by methylated CpG island amplification
    • Toyota M, Ho C, Ahuja N, Jair KW, Li Q, et al. (1999) Identification of differentially methylated sequences in colorectal cancer by methylated CpG island amplification. Cancer Res 59: 2307-2312.
    • (1999) Cancer Res , vol.59 , pp. 2307-2312
    • Toyota, M.1    Ho, C.2    Ahuja, N.3    Jair, K.W.4    Li, Q.5
  • 29
    • 35948981875 scopus 로고    scopus 로고
    • Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters
    • Shen L, Kondo Y, Guo Y, Zhang J, Zhang L, et al. (2007) Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters. PLoS Genet 3: 2023-2036.
    • (2007) PLoS Genet , vol.3 , pp. 2023-2036
    • Shen, L.1    Kondo, Y.2    Guo, Y.3    Zhang, J.4    Zhang, L.5
  • 30
    • 0036274359 scopus 로고    scopus 로고
    • The fundamental role of epigenetic events in cancer
    • Jones PA, Baylin SB, (2002) The fundamental role of epigenetic events in cancer. Nat Rev Genet 3: 415-428.
    • (2002) Nat Rev Genet , vol.3 , pp. 415-428
    • Jones, P.A.1    Baylin, S.B.2
  • 32
    • 10344260184 scopus 로고    scopus 로고
    • CpG island methylator phenotype in cancer
    • Issa JP, (2004) CpG island methylator phenotype in cancer. Nat Rev Cancer 4: 988-993.
    • (2004) Nat Rev Cancer , vol.4 , pp. 988-993
    • Issa, J.P.1
  • 33
    • 0032960181 scopus 로고    scopus 로고
    • Cancer epigenetics comes of age
    • Jones PA, Laird PW, (1999) Cancer epigenetics comes of age. Nat Genet 21: 163-167.
    • (1999) Nat Genet , vol.21 , pp. 163-167
    • Jones, P.A.1    Laird, P.W.2
  • 34
    • 0030806173 scopus 로고    scopus 로고
    • Changing views of the role of matrix metalloproteinases in metastasis
    • Chambers AF, Matrisian LM, (1997) Changing views of the role of matrix metalloproteinases in metastasis. J Natl Cancer Inst 89: 1260-1270.
    • (1997) J Natl Cancer Inst , vol.89 , pp. 1260-1270
    • Chambers, A.F.1    Matrisian, L.M.2
  • 35
    • 34547728776 scopus 로고    scopus 로고
    • Epigenetic inactivation of the tissue inhibitor of metalloproteinase-2 (TIMP-2) gene in human prostate tumors
    • Pulukuri SM, Patibandla S, Patel J, Estes N, Rao JS, (2007) Epigenetic inactivation of the tissue inhibitor of metalloproteinase-2 (TIMP-2) gene in human prostate tumors. Oncogene 26: 5229-5237.
    • (2007) Oncogene , vol.26 , pp. 5229-5237
    • Pulukuri, S.M.1    Patibandla, S.2    Patel, J.3    Estes, N.4    Rao, J.S.5
  • 36
    • 0020340071 scopus 로고
    • Suicide inactivation of the E. coli O6-methylguanine-DNA methyltransferase
    • Lindahl T, Demple B, Robins P, (1982) Suicide inactivation of the E. coli O6-methylguanine-DNA methyltransferase. Embo J 1: 1359-1363.
    • (1982) Embo J , vol.1 , pp. 1359-1363
    • Lindahl, T.1    Demple, B.2    Robins, P.3
  • 37
    • 19244370208 scopus 로고    scopus 로고
    • Inactivation of the DNA repair gene O6-methylguanine-DNA methyltransferase by promoter hypermethylation is associated with G to A mutations in K-ras in colorectal tumorigenesis
    • Esteller M, Toyota M, Sanchez-Cespedes M, Capella G, Peinado MA, et al. (2000) Inactivation of the DNA repair gene O6-methylguanine-DNA methyltransferase by promoter hypermethylation is associated with G to A mutations in K-ras in colorectal tumorigenesis. Cancer Res 60: 2368-2371.
    • (2000) Cancer Res , vol.60 , pp. 2368-2371
    • Esteller, M.1    Toyota, M.2    Sanchez-Cespedes, M.3    Capella, G.4    Peinado, M.A.5
  • 38
    • 0035575781 scopus 로고    scopus 로고
    • Methylation of O(6)-methylguanine-DNA methyltransferase gene is associated significantly with K-ras mutation, lymph node invasion, tumor staging, and disease free survival in patients with gastric carcinoma
    • Park TJ, Han SU, Cho YK, Paik WK, Kim YB, et al. (2001) Methylation of O(6)-methylguanine-DNA methyltransferase gene is associated significantly with K-ras mutation, lymph node invasion, tumor staging, and disease free survival in patients with gastric carcinoma. Cancer 92: 2760-2768.
    • (2001) Cancer , vol.92 , pp. 2760-2768
    • Park, T.J.1    Han, S.U.2    Cho, Y.K.3    Paik, W.K.4    Kim, Y.B.5
  • 39
    • 33750379353 scopus 로고    scopus 로고
    • Promoter hypermethylation of the DNA-repair gene O6-methylguanine-DNA methyltransferase and p53 mutation in diffuse large B-cell lymphoma
    • Hiraga J, Kinoshita T, Ohno T, Mori N, Ohashi H, et al. (2006) Promoter hypermethylation of the DNA-repair gene O6-methylguanine-DNA methyltransferase and p53 mutation in diffuse large B-cell lymphoma. Int J Hematol 84: 248-255.
    • (2006) Int J Hematol , vol.84 , pp. 248-255
    • Hiraga, J.1    Kinoshita, T.2    Ohno, T.3    Mori, N.4    Ohashi, H.5
  • 40
    • 0032401808 scopus 로고    scopus 로고
    • Aging and DNA methylation in colorectal mucosa and cancer
    • Ahuja N, Li Q, Mohan AL, Baylin SB, Issa JP, (1998) Aging and DNA methylation in colorectal mucosa and cancer. Cancer Res 58: 5489-5494.
    • (1998) Cancer Res , vol.58 , pp. 5489-5494
    • Ahuja, N.1    Li, Q.2    Mohan, A.L.3    Baylin, S.B.4    Issa, J.P.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.