메뉴 건너뛰기




Volumn 11, Issue 8, 2011, Pages 2049-2062

Molecular characterization of serotype Asia-1 foot-and-mouth disease viruses in Pakistan and Afghanistan; emergence of a new genetic Group and evidence for a novel recombinant virus

Author keywords

Diversity; Epidemiology; Picornavirus; RNA; Sequence; Vaccine

Indexed keywords

AFGHANISTAN; ARTICLE; CONTROLLED STUDY; FOOT AND MOUTH DISEASE VIRUS; FOOT AND MOUTH DISEASE VIRUS SEROTYPE ASIA 1; GENE SEQUENCE; NONHUMAN; NUCLEOTIDE SEQUENCE; PAKISTAN; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEROTYPE; VIRUS GENOME; VIRUS RECOMBINANT;

EID: 81255146273     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2011.09.015     Document Type: Article
Times cited : (74)

References (60)
  • 1
    • 0024578406 scopus 로고
    • The three-dimensional structure of foot-and-mouth disease virus at 2.9å resolution
    • Acharya R., Fry E., Stuart D., Fox G., Rowlands D., Brown F. The three-dimensional structure of foot-and-mouth disease virus at 2.9å resolution. Nature 1989, 337:709-716.
    • (1989) Nature , vol.337 , pp. 709-716
    • Acharya, R.1    Fry, E.2    Stuart, D.3    Fox, G.4    Rowlands, D.5    Brown, F.6
  • 3
    • 0027977089 scopus 로고
    • Genetic relationships between foot-and-mouth disease type Asia1 viruses
    • Ansell D.M., Samuel A.R., Carpenter W.C., Knowles N.J. Genetic relationships between foot-and-mouth disease type Asia1 viruses. Epidemiol. Infect. 1994, 112:213-324.
    • (1994) Epidemiol. Infect. , vol.112 , pp. 213-324
    • Ansell, D.M.1    Samuel, A.R.2    Carpenter, W.C.3    Knowles, N.J.4
  • 4
    • 0016703419 scopus 로고
    • Variation among strains of type A foot-and-mouth disease virus in the Eastern Mediterranean region 1964-1972
    • Arrowsmith A.E. Variation among strains of type A foot-and-mouth disease virus in the Eastern Mediterranean region 1964-1972. J. Hyg. (Lond.) 1975, 75:387-397.
    • (1975) J. Hyg. (Lond.) , vol.75 , pp. 387-397
    • Arrowsmith, A.E.1
  • 6
    • 77956264952 scopus 로고    scopus 로고
    • Diversity and transboundary mobility of serotype O foot-and-mouth disease virus in East Africa: implications for vaccination policies
    • Balinda S.N., Sangula A.K., Heller R., Muwanika V.B., Belsham G.J., Masembe C., Siegismund H.R. Diversity and transboundary mobility of serotype O foot-and-mouth disease virus in East Africa: implications for vaccination policies. Infect. Genet. Evol. 2010, 10:1058-1065.
    • (2010) Infect. Genet. Evol. , vol.10 , pp. 1058-1065
    • Balinda, S.N.1    Sangula, A.K.2    Heller, R.3    Muwanika, V.B.4    Belsham, G.J.5    Masembe, C.6    Siegismund, H.R.7
  • 7
    • 0023212002 scopus 로고
    • Subtyping of European foot-and-mouth disease virus strains by nucleotide sequence determination
    • Beck E., Strohmaier K. Subtyping of European foot-and-mouth disease virus strains by nucleotide sequence determination. J. Virol. 1987, 61:1621-1629.
    • (1987) J. Virol. , vol.61 , pp. 1621-1629
    • Beck, E.1    Strohmaier, K.2
  • 8
    • 79551513564 scopus 로고    scopus 로고
    • Rescue of foot-and-mouth disease viruses that are pathogenic for cattle from preserved viral RNA samples
    • Belsham G.J., Jamal S.M., Tjørnehøj K., Bøtner A. Rescue of foot-and-mouth disease viruses that are pathogenic for cattle from preserved viral RNA samples. PLoS One 2011, 6(1):e14621. 10.1371/journal.pone.0014621.
    • (2011) PLoS One , vol.6 , Issue.1
    • Belsham, G.J.1    Jamal, S.M.2    Tjørnehøj, K.3    Bøtner, A.4
  • 9
    • 10644274416 scopus 로고    scopus 로고
    • Translation and replication of FMDV RNA
    • Belsham G.J. Translation and replication of FMDV RNA. Curr. Top. Microbiol. Immunol. 2005, 288:43-70.
    • (2005) Curr. Top. Microbiol. Immunol. , vol.288 , pp. 43-70
    • Belsham, G.J.1
  • 10
    • 0002223386 scopus 로고
    • Methods used in typing the virus of Foot-and-mouth disease at Pirbright, 1950-1955
    • Methods of Typing and Cultivation of Foot-and-Mouth Disease Virus, Project No. 208. European Productivity Agency of the Organization of European Cooperation (OEEC), Paris.
    • Brooksby, J.B., Rogers, J., 1957. Methods used in typing the virus of Foot-and-mouth disease at Pirbright, 1950-1955. In: Methods of Typing and Cultivation of Foot-and-Mouth Disease Virus, Project No. 208. European Productivity Agency of the Organization of European Cooperation (OEEC), Paris, pp. 31-34.
    • (1957) , pp. 31-34
    • Brooksby, J.B.1    Rogers, J.2
  • 12
    • 0033771358 scopus 로고    scopus 로고
    • TCS: a computer program to estimate gene geneologies
    • Clement M., Posada D., Crandall K.A. TCS: a computer program to estimate gene geneologies. Mol. Ecol. 2000, 9:1657-1660.
    • (2000) Mol. Ecol. , vol.9 , pp. 1657-1660
    • Clement, M.1    Posada, D.2    Crandall, K.A.3
  • 16
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees.
    • Drummond A.J., Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 2007, 7:214. 10.1186/1471-2148-7-214.
    • (2007) BMC Evol. Biol. , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 17
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 1985, 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 18
    • 82655188824 scopus 로고    scopus 로고
    • Foot-and-mouth disease in central Asia: findings and issues
    • The 4th Annual Meeting EPIZONE, organized by AFSSA (Agence Francaise de Securite Sanitaire des Aliments) France, held in Saint Malo, France, from 7-10 June 2010
    • Ferrari, G., Hussain, M., Khan, E., Jamal, S., Nawroz, A.H., Aslami, A., Murvatulloev, S., Belsham, G., Brocchi, E., Lubroth, J., 2010. Foot-and-mouth disease in central Asia: findings and issues. In: Bridges to the Future. The 4th Annual Meeting EPIZONE, organized by AFSSA (Agence Francaise de Securite Sanitaire des Aliments) France, held in Saint Malo, France, from 7-10 June 2010, pp. 289.
    • (2010) Bridges to the Future. , pp. 289
    • Ferrari, G.1    Hussain, M.2    Khan, E.3    Jamal, S.4    Nawroz, A.H.5    Aslami, A.6    Murvatulloev, S.7    Belsham, G.8    Brocchi, E.9    Lubroth, J.10
  • 20
    • 0024639043 scopus 로고
    • The cell attachment site on foot-and-mouth disease virus includes the amino acid sequence RGD (arginine-glycine-aspartic acid)
    • Fox G., Parry N.R., Barnett P.V., McGinn B., Rowlands D.J., Brown F. The cell attachment site on foot-and-mouth disease virus includes the amino acid sequence RGD (arginine-glycine-aspartic acid). J. Gen. Virol. 1989, 70:625-637.
    • (1989) J. Gen. Virol. , vol.70 , pp. 625-637
    • Fox, G.1    Parry, N.R.2    Barnett, P.V.3    McGinn, B.4    Rowlands, D.J.5    Brown, F.6
  • 21
    • 0023115693 scopus 로고
    • Isolation and characterization of recombinants between attenuated and virulent aphthovirus strains
    • Giraudo A.T., Sagedahl A., Bergmann I.E., La Torre J.L., Scodeller E.A. Isolation and characterization of recombinants between attenuated and virulent aphthovirus strains. J. Virol. 1987, 61:419-425.
    • (1987) J. Virol. , vol.61 , pp. 419-425
    • Giraudo, A.T.1    Sagedahl, A.2    Bergmann, I.E.3    La Torre, J.L.4    Scodeller, E.A.5
  • 22
    • 0022376704 scopus 로고
    • Dating the human-ape split by a molecular clock of mitochondrial DNA
    • Hasegawa M., Kishino H., Yano T. Dating the human-ape split by a molecular clock of mitochondrial DNA. J. Mol. Evol. 1985, 22:160-174.
    • (1985) J. Mol. Evol. , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 23
    • 2442692750 scopus 로고    scopus 로고
    • Low linkage disequilibrium indicative of recombination in foot-and-mouth disease virus gene sequence alignments
    • Haydon D.T., Bastos A.D., Awadalla P. Low linkage disequilibrium indicative of recombination in foot-and-mouth disease virus gene sequence alignments. J. Gen. Virol. 2004, 85:1095-1100.
    • (2004) J. Gen. Virol. , vol.85 , pp. 1095-1100
    • Haydon, D.T.1    Bastos, A.D.2    Awadalla, P.3
  • 25
    • 77957019931 scopus 로고    scopus 로고
    • Status of foot-and-mouth disease in Pakistan
    • Jamal S.M., Ahmed S., Hussain M., Ali Q. Status of foot-and-mouth disease in Pakistan. Arch. Virol. 2010, 155:1487-1491.
    • (2010) Arch. Virol. , vol.155 , pp. 1487-1491
    • Jamal, S.M.1    Ahmed, S.2    Hussain, M.3    Ali, Q.4
  • 26
    • 79960385413 scopus 로고    scopus 로고
    • Genetic diversity of foot-and-mouth disease virus serotype O in Pakistan and Afghanistan, 1997-2009
    • Jamal S.M., Ferrari G., Ahmed S., Normann P., Belsham G.J. Genetic diversity of foot-and-mouth disease virus serotype O in Pakistan and Afghanistan, 1997-2009. Infect. Genet. Evol. 2011, 11:1229-1238. 10.1016/j.meegid.2011.03.006.
    • (2011) Infect. Genet. Evol. , vol.11 , pp. 1229-1238
    • Jamal, S.M.1    Ferrari, G.2    Ahmed, S.3    Normann, P.4    Belsham, G.J.5
  • 27
    • 81255195601 scopus 로고    scopus 로고
    • Evolutionary analysis of serotype A foot-and-mouth disease viruses circulating in Pakistan and Afghanistan during 2002-2009
    • (epub 3rd August)
    • Jamal S.M., Ferrari G., Ahmed S., Normann P., Curry S., Belsham G.J. Evolutionary analysis of serotype A foot-and-mouth disease viruses circulating in Pakistan and Afghanistan during 2002-2009. J. Gen. Virol. 2011, (epub 3rd August). 10.1099/vir.0.035626-0.
    • (2011) J. Gen. Virol.
    • Jamal, S.M.1    Ferrari, G.2    Ahmed, S.3    Normann, P.4    Curry, S.5    Belsham, G.J.6
  • 28
    • 0025076813 scopus 로고
    • Sequence analysis of monoclonal antibody resistant mutants of type O foot and mouth disease virus: evidence for the involvement of the three surface exposed capsid proteins in four antigenic sites
    • Kitson J.D., McCahon D., Belsham G.J. Sequence analysis of monoclonal antibody resistant mutants of type O foot and mouth disease virus: evidence for the involvement of the three surface exposed capsid proteins in four antigenic sites. Virology 1990, 179:26-34.
    • (1990) Virology , vol.179 , pp. 26-34
    • Kitson, J.D.1    McCahon, D.2    Belsham, G.J.3
  • 29
    • 38149063512 scopus 로고    scopus 로고
    • Genetic characterization of the recent foot-and-mouth disease virus subtype A/IRN/2005
    • Klein J., Hussain M., Ahmad M., Normann P., Afzal M., Alexandersen S. Genetic characterization of the recent foot-and-mouth disease virus subtype A/IRN/2005. Virol. J. 2007, 4:122. 10.1186/1743-422X-4-122.
    • (2007) Virol. J. , vol.4 , pp. 122
    • Klein, J.1    Hussain, M.2    Ahmad, M.3    Normann, P.4    Afzal, M.5    Alexandersen, S.6
  • 30
    • 43749114564 scopus 로고    scopus 로고
    • Epidemiology of foot-and-mouth disease in Landhi Dairy Colony, Pakistan, the world largest Buffalo colony
    • Klein J., Hussain M., Ahmad M., Afzal M., Alexandersen S. Epidemiology of foot-and-mouth disease in Landhi Dairy Colony, Pakistan, the world largest Buffalo colony. Virol. J. 2008, 5:53. 10.1186/1743-422X-5-53.
    • (2008) Virol. J. , vol.5 , pp. 53
    • Klein, J.1    Hussain, M.2    Ahmad, M.3    Afzal, M.4    Alexandersen, S.5
  • 33
    • 0037235302 scopus 로고    scopus 로고
    • Molecular epidemiology of foot-and-mouth disease virus
    • Knowles N.J., Samuel A.R. Molecular epidemiology of foot-and-mouth disease virus. Virus Res. 2003, 91:65-80.
    • (2003) Virus Res. , vol.91 , pp. 65-80
    • Knowles, N.J.1    Samuel, A.R.2
  • 34
    • 0026534757 scopus 로고
    • Identification and characterization of foot-and-mouth disease virus O1 Burgwedel/1987 as an intertypic recombinant
    • Krebs O., Marquardt O. Identification and characterization of foot-and-mouth disease virus O1 Burgwedel/1987 as an intertypic recombinant. J. Gen. Virol. 1992, 73:613-619.
    • (1992) J. Gen. Virol. , vol.73 , pp. 613-619
    • Krebs, O.1    Marquardt, O.2
  • 37
    • 34548252045 scopus 로고    scopus 로고
    • Comparisons of the complete genomes of two Chinese isolates of a recent foot-and-mouth disease type Asia1 virus
    • Li D., Shang Y.J., Liu Z.X., Liu X.T., Cai X.P. Comparisons of the complete genomes of two Chinese isolates of a recent foot-and-mouth disease type Asia1 virus. Arch. Virol. 2007, 152:1699-1708.
    • (2007) Arch. Virol. , vol.152 , pp. 1699-1708
    • Li, D.1    Shang, Y.J.2    Liu, Z.X.3    Liu, X.T.4    Cai, X.P.5
  • 38
    • 0032889281 scopus 로고    scopus 로고
    • Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination
    • Lole K.S., Bollinger R.C., Paranjape R.S., Gadkari D., Kulkarni S.S., Novak N.G., Ingersoll R., Sheppard H.W., Ray S.C. Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J. Virol. 1999, 73:152-160.
    • (1999) J. Virol. , vol.73 , pp. 152-160
    • Lole, K.S.1    Bollinger, R.C.2    Paranjape, R.S.3    Gadkari, D.4    Kulkarni, S.S.5    Novak, N.G.6    Ingersoll, R.7    Sheppard, H.W.8    Ray, S.C.9
  • 40
    • 0035039584 scopus 로고    scopus 로고
    • Genetic and antigenic analysis of type A foot-and-mouth disease viruses isolated in India during 1987-1996
    • Nayak B., Pattnaik B., Tosh C., Sanyal A., Hemadri D., Patil S.S., Venkataramanan R. Genetic and antigenic analysis of type A foot-and-mouth disease viruses isolated in India during 1987-1996. Acta Virol. 2001, 45:13-21.
    • (2001) Acta Virol. , vol.45 , pp. 13-21
    • Nayak, B.1    Pattnaik, B.2    Tosh, C.3    Sanyal, A.4    Hemadri, D.5    Patil, S.S.6    Venkataramanan, R.7
  • 43
    • 0021607792 scopus 로고
    • Antigenic variation in foot-and-mouth disease: studies based on the virus neutralization reaction
    • Rweyemamu M. Antigenic variation in foot-and-mouth disease: studies based on the virus neutralization reaction. J. Biol. Stand. 1984, 12:323-337.
    • (1984) J. Biol. Stand. , vol.12 , pp. 323-337
    • Rweyemamu, M.1
  • 45
    • 84911418293 scopus 로고    scopus 로고
    • Phylogenetic study of FMDV isolates collected in Russia
    • CIS-countries and Mongolia in 2000-2007. Appendix 9. The global control of FMD - tools, ideas and ideals. Erice, Italy, 14-17 October, 2008. Open session of the Research Group of the Standing Technical Committee on FMD. European Commission for the control of FMD, Food and Agriculture Organization of the United Nations, Rome, Italy
    • Scherbakov, A., Timina, A., Borisov, V., 2008. Phylogenetic study of FMDV isolates collected in Russia, CIS-countries and Mongolia in 2000-2007. Appendix 9. The global control of FMD - tools, ideas and ideals. Erice, Italy, 14-17 October, 2008. Open session of the Research Group of the Standing Technical Committee on FMD. European Commission for the control of FMD, Food and Agriculture Organization of the United Nations, Rome, Italy, pp. 69-72.
    • (2008) , pp. 69-72
    • Scherbakov, A.1    Timina, A.2    Borisov, V.3
  • 47
    • 0027157960 scopus 로고
    • Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
    • Tamura K., Nei M. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 1993, 10:512-526.
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 512-526
    • Tamura, K.1    Nei, M.2
  • 48
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
    • (epub 18th August)
    • Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Mol. Biol. Evol. 2011, (epub 18th August). 10.1093/molbev/msr121.
    • (2011) Mol. Biol. Evol.
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 50
    • 0036008608 scopus 로고    scopus 로고
    • Phylogenetic analysis of serotype A foot-and-mouth disease virus isolated in India between 1977 and 2000
    • Tosh C., Sanyal A., Hemadri D., Venkataramanan R. Phylogenetic analysis of serotype A foot-and-mouth disease virus isolated in India between 1977 and 2000. Arch. Virol. 2002, 147:493-513.
    • (2002) Arch. Virol. , vol.147 , pp. 493-513
    • Tosh, C.1    Sanyal, A.2    Hemadri, D.3    Venkataramanan, R.4
  • 54
    • 82655170361 scopus 로고    scopus 로고
    • WRL-FMD, Annual OIE/FAO FMD Reference Laboratory Network Report
    • World Reference Laboratory for Foot-and-Mouth Disease, Institute for Animal Health, January-November 2005, Pirbright, UK.
    • WRL-FMD, 2005. Annual OIE/FAO FMD Reference Laboratory Network Report. World Reference Laboratory for Foot-and-Mouth Disease, Institute for Animal Health, January-November 2005, Pirbright, UK.
    • (2005)
  • 55
    • 82655188821 scopus 로고    scopus 로고
    • WRL-FMD, Annual OIE/FAO FMD Reference Laboratory Network Report
    • World Reference Laboratory for Foot-and-Mouth Disease, Institute for Animal Health, January-December 2006, Pirbright, UK.
    • WRL-FMD, 2006. Annual OIE/FAO FMD Reference Laboratory Network Report. World Reference Laboratory for Foot-and-Mouth Disease, Institute for Animal Health, January-December 2006, Pirbright, UK.
    • (2006)
  • 56
    • 82655179353 scopus 로고    scopus 로고
    • WRL-FMD, WRLFMD quarterly report, January to March, 2010. Reference Laboratory Contract Report
    • Institute for Animal Health, Pirbirght, UK.
    • WRL-FMD, 2010. WRLFMD quarterly report, January to March, 2010. Reference Laboratory Contract Report. Institute for Animal Health, Pirbirght, UK.
    • (2010)
  • 57
    • 82655179354 scopus 로고    scopus 로고
    • WRL-FMD, Genotyping report FMDV type Asia-1 (Afghanistan)
    • Batch: WRL-FMD/2011/00023, 28th May, 2011, Institute for Animal Health, Pirbirght, UK.
    • WRL-FMD, 2011a. Genotyping report FMDV type Asia-1 (Afghanistan). Batch: WRL-FMD/2011/00023, 28th May, 2011, Institute for Animal Health, Pirbirght, UK.
    • (2011)
  • 58
    • 82655179354 scopus 로고    scopus 로고
    • WRL-FMD, Genotyping report FMDV type Asia-1 (Iran)
    • Batch: WRL-FMD/2011/00020, 5th May, 2011. Institute for Animal Health, Pirbirght, UK.
    • WRL-FMD, 2011b. Genotyping report FMDV type Asia-1 (Iran). Batch: WRL-FMD/2011/00020, 5th May, 2011. Institute for Animal Health, Pirbirght, UK.
    • (2011)
  • 59
    • 82655179354 scopus 로고    scopus 로고
    • WRL-FMD, Genotyping report FMDV type Asia-1 (Bahrain)
    • Batch: WRL-FMD/2011/00012, 18th March, 2011. Institute for Animal Health, Pirbirght, UK.
    • WRL-FMD, 2011c. Genotyping report FMDV type Asia-1 (Bahrain). Batch: WRL-FMD/2011/00012, 18th March, 2011. Institute for Animal Health, Pirbirght, UK.
    • (2011)
  • 60


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.