-
1
-
-
0032508046
-
Deciphering the biology of mycobacterium tuberculosis from the complete genome sequence
-
DOI 10.1038/31159
-
S.T. Cole, R. Brosch, J. Parkhill, T. Garnier, C. Churcher, D. Harris, S.V. Gordon, K. Eiglmeier, S. Gas, C.E. Barry III, F. Tekaia, K. Badcock, D. Basham, D. Brown, T. Chillingworth, R. Connor, R. Davies, K. Devlin, T. Feltwell, S. Gentles, N. Hamlin, S. Holroyd, T. Hornsby, K. Jagels, and B.G. Barrell Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence Nature 393 6685 1998 June 11 537 544 [see comments] [published erratum appears in Nature 1998 Nov 12;396(6707):190] (Pubitemid 28319235)
-
(1998)
Nature
, vol.393
, Issue.6685
, pp. 537-544
-
-
Cole, S.T.1
Brosch, R.2
Parkhill, J.3
Garnier, T.4
Churcher, C.5
Harris, D.6
Gordon, S.V.7
Eiglmeier, K.8
Gas, S.9
Barry III, C.E.10
Tekaia, F.11
Badcock, K.12
Basham, D.13
Brown, D.14
Chillingworth, T.15
Connor, R.16
Davies, R.17
Devlin, K.18
Feltwell, T.19
Gentles, S.20
Hamlin, N.21
Holroyd, S.22
Hornsby, T.23
Jagels, K.24
Krogh, A.25
McLean, J.26
Moule, S.27
Murphy, L.28
Oliver, K.29
Osborne, J.30
Quail, M.A.31
Rajandream, M.-A.32
Rogers, J.33
Rutter, S.34
Seeger, K.35
Skelton, J.36
Squares, R.37
Squares, S.38
Sulston, J.E.39
Taylor, K.40
Whitehead, S.41
Barrell, B.G.42
more..
-
2
-
-
33751323180
-
Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions
-
N.C. Gey van Pittius, S.L. Sampson, H. Lee, Y. Kim, P.D. van Helden, and R.M. Warren Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions BMC Evol Biol 6 2006 95
-
(2006)
BMC Evol Biol
, vol.6
, pp. 95
-
-
Gey Van Pittius, N.C.1
Sampson, S.L.2
Lee, H.3
Kim, Y.4
Van Helden, P.D.5
Warren, R.M.6
-
3
-
-
67651245670
-
The PE and PPE protein families of Mycobacterium tuberculosis
-
S.H. Kaufmann, E. Rubin, Wiley-VCH Verlag GmbH%Co. KGaA Weinheim
-
G. Delogu, S.T. Cole, and R. Brosch The PE and PPE protein families of Mycobacterium tuberculosis S.H. Kaufmann, E. Rubin, Handbook of tuberculosis 2008 Wiley-VCH Verlag GmbH%Co. KGaA Weinheim 131 150
-
(2008)
Handbook of Tuberculosis
, pp. 131-150
-
-
Delogu, G.1
Cole, S.T.2
Brosch, R.3
-
4
-
-
33744459472
-
Toward the structural genomics of complexes: Crystal structure of a PE/PPE protein complex from Mycobacterium tuberculosis
-
DOI 10.1073/pnas.0602606103
-
M. Strong, M.R. Sawaya, S. Wang, M. Phillips, D. Cascio, and D. Eisenberg Toward the structural genomics of complexes: crystal structure of a PE/PPE protein complex from Mycobacterium tuberculosis Proc Natl Acad Sci USA 103 21 2006 May 23 8060 8065 (Pubitemid 43801052)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.21
, pp. 8060-8065
-
-
Strong, M.1
Sawaya, M.R.2
Wang, S.3
Phillips, M.4
Cascio, D.5
Eisenberg, D.6
-
5
-
-
32344444893
-
Clusters of PE and PPE genes of Mycobacterium tuberculosis are organized in operons: Evidence that PE Rv2431c is co-transcribed with PPE Rv2430c and their gene products interact with each other
-
DOI 10.1016/j.febslet.2006.01.042, PII S0014579306000822
-
S. Tundup, Y. Akhter, D. Thiagarajan, and S.E. Hasnain Clusters of PE and PPE genes of Mycobacterium tuberculosis are organized in operons: evidence that PE Rv2431c is co-transcribed with PPE Rv2430c and their gene products interact with each other FEBS Lett 580 5 2006 February 20 1285 1293 (Pubitemid 43221990)
-
(2006)
FEBS Letters
, vol.580
, Issue.5
, pp. 1285-1293
-
-
Tundup, S.1
Akhter, Y.2
Thiagarajan, D.3
Hasnain, S.E.4
-
6
-
-
52949109810
-
Identifying cognate binding pairs among a large set of paralogs: The case of PE/PPE proteins of Mycobacterium tuberculosis
-
R. Riley, M. Pellegrini, and D. Eisenberg Identifying cognate binding pairs among a large set of paralogs: the case of PE/PPE proteins of Mycobacterium tuberculosis PLoS Comput Biol 4 9 2008 e1000174
-
(2008)
PLoS Comput Biol
, vol.4
, Issue.9
, pp. 1000174
-
-
Riley, R.1
Pellegrini, M.2
Eisenberg, D.3
-
7
-
-
33749997722
-
A specific secretion system mediates PPE41 transport in pathogenic mycobacteria
-
DOI 10.1111/j.1365-2958.2006.05409.x
-
A.M. Abdallah, T. Verboom, F. Hannes, M. Safi, M. Strong, D. Eisenberg, R.J. Musters, C.M. Vandenbroucke-Grauls, B.J. Appelmelk, J. Luirink, and W. Bitter A specific secretion system mediates PPE41 transport in pathogenic mycobacteria Mol Microbiol 62 3 2006 November 667 679 (Pubitemid 44571593)
-
(2006)
Molecular Microbiology
, vol.62
, Issue.3
, pp. 667-679
-
-
Abdallah, A.M.1
Verboom, T.2
Hannes, F.3
Safi, M.4
Strong, M.5
Eisenberg, D.6
Musters, R.J.P.7
Vandenbroucke-Grauls, C.M.J.E.8
Appelmelk, B.J.9
Luirink, J.10
Bitter, W.11
-
8
-
-
0035700015
-
Expression, characterization and subcellular localization of the Mycobacterium tuberculosis PPE gene Rv1917c
-
DOI 10.1054/tube.2001.0304
-
S.L. Sampson, P. Lukey, R.M. Warren, P.D. van Helden, M. Richardson, and M.J. Everett Expression, characterization and subcellular localization of the Mycobacterium tuberculosis PPE gene Rv1917c Tuberculosis (Edinb) 81 5-6 2001 305 317 (Pubitemid 34087861)
-
(2001)
Tuberculosis
, vol.81
, Issue.5-6
, pp. 305-317
-
-
Sampson, S.L.1
Lukey, P.2
Warren, R.M.3
Van Helden, P.D.4
Richardson, M.5
Everett, M.J.6
-
9
-
-
1842588596
-
Cell Envelope Protein PPE68 Contributes to Mycobacterium tuberculosis RD1 Immunogenicity Independently of A 10-Kilodalton Culture Filtrate Protein and ESAT-6
-
DOI 10.1128/IAI.72.4.2170-2176.2004
-
C. Demangel, P. Brodin, P.J. Cockle, R. Brosch, L. Majlessi, C. Leclerc, and S.T. Cole Cell envelope protein PPE68 contributes to Mycobacterium tuberculosis RD1 immunogenicity independently of a 10-kilodalton culture filtrate protein and ESAT-6 Infect Immun 72 4 2004 2170 2176 (Pubitemid 38419931)
-
(2004)
Infection and Immunity
, vol.72
, Issue.4
, pp. 2170-2176
-
-
Demangel, C.1
Brodin, P.2
Cockle, P.J.3
Brosch, R.4
Majlessi, L.5
Leclerc, C.6
Cole, S.T.7
-
10
-
-
37749009652
-
Functional role of the PE domain and immunogenicity of the Mycobacterium tuberculosis triacylglycerol hydrolase LipY
-
K.C. Mishra, C.C. de, Y. Narayana, P. Bifani, A.K. Brown, G.S. Besra, V.M. Katoch, B. Joshi, K.N. Balaji, and L. Kremer Functional role of the PE domain and immunogenicity of the Mycobacterium tuberculosis triacylglycerol hydrolase LipY Infect Immun 76 1 2008 January 127 140
-
(2008)
Infect Immun
, vol.76
, Issue.1
, pp. 127-140
-
-
Mishra, K.C.1
De, C.C.2
Narayana, Y.3
Bifani, P.4
Brown, A.K.5
Besra, G.S.6
Katoch, V.M.7
Joshi, B.8
Balaji, K.N.9
Kremer, L.10
-
11
-
-
46249102682
-
Identification of a novel multidrug efflux pump of Mycobacterium tuberculosis
-
DOI 10.1128/AAC.00298-08
-
O. Danilchanka, C. Mailaender, and M. Niederweis Identification of a novel multidrug efflux pump of Mycobacterium tuberculosis Antimicrob Agents Chemother 52 7 2008 July 2503 2511 (Pubitemid 351915682)
-
(2008)
Antimicrobial Agents and Chemotherapy
, vol.52
, Issue.7
, pp. 2503-2511
-
-
Danilchanka, O.1
Mailaender, C.2
Niederweis, M.3
-
12
-
-
77951518283
-
Definition of novel cell envelope associated proteins in Triton X-114 extracts of Mycobacterium tuberculosis H37Rv
-
H. Malen, S. Pathak, T. Softeland, G.A. De Souza, and H.G. Wiker Definition of novel cell envelope associated proteins in Triton X-114 extracts of Mycobacterium tuberculosis H37Rv BMC Microbiol 10 2010 132
-
(2010)
BMC Microbiol
, vol.10
, pp. 132
-
-
Malen, H.1
Pathak, S.2
Softeland, T.3
De Souza, G.A.4
Wiker, H.G.5
-
13
-
-
79953270009
-
Mycobacterial PE/PPE proteins at the host-pathogen interface
-
S.L. Sampson Mycobacterial PE/PPE proteins at the host-pathogen interface Clin Dev Immunol 2011 2011 497203
-
(2011)
Clin Dev Immunol
, vol.2011
, pp. 497203
-
-
Sampson, S.L.1
-
14
-
-
0026576544
-
Genetic markers for the epidemiology of tuberculosis
-
J.D. van Embden, S.D. van, P.M. Small, and P.W. Hermans Genetic markers for the epidemiology of tuberculosis Res Microbiol 143 4 1992 May 385 391
-
(1992)
Res Microbiol
, vol.143
, Issue.4
, pp. 385-391
-
-
Van Embden, J.D.1
Van, S.D.2
Small, P.M.3
Hermans, P.W.4
-
15
-
-
0028948847
-
Characterization of the highly abundant polymorphic GC-rich-repetitive sequence (PGRS) present in Mycobacterium tuberculosis
-
S. Poulet, and S.T. Cole Characterization of the highly abundant polymorphic GC-rich-repetitive sequence (PGRS) present in Mycobacterium tuberculosis Arch Microbiol 163 2 1995 February 87 95
-
(1995)
Arch Microbiol
, vol.163
, Issue.2
, pp. 87-95
-
-
Poulet, S.1
Cole, S.T.2
-
16
-
-
4544312369
-
The transcriptional responses of Mycobacterium tuberculosis to inhibitors of metabolism. Novel insights into drug mechanisms of action
-
DOI 10.1074/jbc.M406796200
-
H.I. Boshoff, T.G. Myers, B.R. Copp, M.R. McNeil, M.A. Wilson, and C.E. Barry III The transcriptional responses of Mycobacterium tuberculosis to inhibitors of metabolism: novel insights into drug mechanisms of action J Biol Chem 279 38 2004 September 17 40174 40184 (Pubitemid 39258293)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.38
, pp. 40174-40184
-
-
Boshoff, H.I.M.1
Myers, T.G.2
Copp, B.R.3
McNeil, M.R.4
Wilson, M.A.5
Barry III, C.E.6
-
17
-
-
0034059379
-
Accumulation of KRM-1648 by Mycobacterium aurum and Mycobacterium tuberculosis
-
L.J. Piddock, and V. Ricci Accumulation of KRM-1648 by Mycobacterium aurum and Mycobacterium tuberculosis J Antimicrob Chemother 45 5 2000 May 681 684 (Pubitemid 30255651)
-
(2000)
Journal of Antimicrobial Chemotherapy
, vol.45
, Issue.5
, pp. 681-684
-
-
Piddock, L.J.V.1
Ricci, V.2
-
18
-
-
0032955397
-
Differential expression of 10 sigma factor genes in Mycobacterium tuberculosis
-
DOI 10.1046/j.1365-2958.1999.01212.x
-
R. Manganelli, E. Dubnau, S. Tyagi, F.R. Kramer, and I. Smith Differential expression of 10 sigma factor genes in Mycobacterium tuberculosis Mol Microbiol 31 2 1999 715 724 (Pubitemid 29046111)
-
(1999)
Molecular Microbiology
, vol.31
, Issue.2
, pp. 715-724
-
-
Manganelli, R.1
Dubnau, E.2
Tyagi, S.3
Kramer, F.R.4
Smith, I.5
-
19
-
-
0034903883
-
E: Role in global gene expression and survival in macrophages
-
DOI 10.1046/j.1365-2958.2001.02525.x
-
R. Manganelli, M.I. Voskuil, G.K. Schoolnik, and I. Smith The Mycobacterium tuberculosis ECF sigma factor sigmaE: role in global gene expression and survival in macrophages Mol Microbiol 41 2 2001 423 437 (Pubitemid 32730541)
-
(2001)
Molecular Microbiology
, vol.41
, Issue.2
, pp. 423-437
-
-
Manganelli, R.1
Voskuil, M.I.2
Schoolnik, G.K.3
Smith, I.4
-
20
-
-
44449117313
-
Evaluation of the anti-tuberculosis activity generated by different multigene DNA vaccine constructs
-
M. Sali, S. Clarizio, C. Pusceddu, A. Zumbo, G. Pecorini, S. Rocca, S. Zanetti, G. Delogu, and G. Fadda Evaluation of the anti-tuberculosis activity generated by different multigene DNA vaccine constructs Microbes Infect 2008 February 23
-
(2008)
Microbes Infect
-
-
Sali, M.1
Clarizio, S.2
Pusceddu, C.3
Zumbo, A.4
Pecorini, G.5
Rocca, S.6
Zanetti, S.7
Delogu, G.8
Fadda, G.9
-
21
-
-
0032239263
-
Extraction of RNA from mycobacteria
-
E. Mahenthiralingam Extraction of RNA from mycobacteria Methods Mol Biol 101 65 1998 75
-
(1998)
Methods Mol Biol
, vol.101
, Issue.65
, pp. 75
-
-
Mahenthiralingam, E.1
-
22
-
-
0032240715
-
Analysis of the genome of Mycobacterium tuberculosis H37Rv
-
S.T. Cole, and B.G. Barrell Analysis of the genome of Mycobacterium tuberculosis H37Rv Novartis Found Symp 217 1998 160 172
-
(1998)
Novartis Found Symp
, vol.217
, pp. 160-172
-
-
Cole, S.T.1
Barrell, B.G.2
-
23
-
-
33748366966
-
PE-PGRS proteins are differentially expressed by Mycobacterium tuberculosis in host tissues
-
G. Delogu, M. Sanguinetti, C. Pusceddu, A. Bua, M.J. Brennan, S. Zanetti, and G. Fadda PE-PGRS proteins are differentially expressed by Mycobacterium tuberculosis in host tissues Microbes Infect 8 8 2006 July 2061 2067
-
(2006)
Microbes Infect
, vol.8
, Issue.8
, pp. 2061-2067
-
-
Delogu, G.1
Sanguinetti, M.2
Pusceddu, C.3
Bua, A.4
Brennan, M.J.5
Zanetti, S.6
Fadda, G.7
-
24
-
-
0028807406
-
Mapping of the delayed-type hypersensitivity-inducing epitope of secreted protein MPT64 from Mycobacterium tuberculosis
-
T. Oettinger, A. Holm, I.M. Mtoni, A.B. Andersen, and K. Hasloov Mapping of the delayed-type hypersensitivity-inducing epitope of secreted protein MPT64 from Mycobacterium tuberculosis Infect Immun 63 12 1995 December 4613 4618
-
(1995)
Infect Immun
, vol.63
, Issue.12
, pp. 4613-4618
-
-
Oettinger, T.1
Holm, A.2
Mtoni, I.M.3
Andersen, A.B.4
Hasloov, K.5
-
25
-
-
0000812428
-
Identification of a virulence gene cluster of Mycobacterium tuberculosis by signature-tagged transposon mutagenesis
-
DOI 10.1046/j.1365-2958.1999.01593.x
-
L.R. Camacho, D. Ensergueix, E. Perez, B. Gicquel, and C. Guilhot Identification of a virulence gene cluster of Mycobacterium tuberculosis by signature-tagged transposon mutagenesis Mol Microbiol 34 2 1999 October 257 267 (Pubitemid 29486244)
-
(1999)
Molecular Microbiology
, vol.34
, Issue.2
, pp. 257-267
-
-
Camacho, L.R.1
Ensergueix, D.2
Perez, E.3
Gicquel, B.4
Guilhot, C.5
-
26
-
-
15944409915
-
A Mycobacterium avium PPE gene is associated with the ability of the bacterium to grow in macrophages and virulence in mice
-
DOI 10.1111/j.1462-5822.2004.00484.x
-
Y. Li, E. Miltner, M. Wu, M. Petrofsky, and L.E. Bermudez A Mycobacterium avium PPE gene is associated with the ability of the bacterium to grow in macrophages and virulence in mice Cell Microbiol 7 4 2005 April 539 548 (Pubitemid 40439453)
-
(2005)
Cellular Microbiology
, vol.7
, Issue.4
, pp. 539-548
-
-
Li, Y.1
Miltner, E.2
Wu, M.3
Petrofsky, M.4
Bermudez, L.E.5
-
27
-
-
31844441997
-
Unique transcriptome signature of Mycobacterium tuberculosis in pulmonary tuberculosis
-
DOI 10.1128/IAI.74.2.1233-1242.2006
-
H. Rachman, M. Strong, T. Ulrichs, L. Grode, J. Schuchhardt, H. Mollenkopf, G.A. Kosmiadi, D. Eisenberg, and S.H. Kaufmann Unique transcriptome signature of Mycobacterium tuberculosis in pulmonary tuberculosis Infect Immun 74 2 2006 February 1233 1242 (Pubitemid 43185563)
-
(2006)
Infection and Immunity
, vol.74
, Issue.2
, pp. 1233-1242
-
-
Rachman, H.1
Strong, M.2
Ulrichs, T.3
Grode, L.4
Schuchhardt, J.5
Mollenkopf, H.6
Kosmiadi, G.A.7
Eisenberg, D.8
Kaufmann, S.H.E.9
-
28
-
-
3042838120
-
Mycobacterium tuberculosis gene expression during adaptation to stationary phase and low-oxygen dormancy
-
DOI 10.1016/j.tube.2004.02.003, PII S147297920400023X
-
M.I. Voskuil, K.C. Visconti, and G.K. Schoolnik Mycobacterium tuberculosis gene expression during adaptation to stationary phase and low-oxygen dormancy Tuberculosis (Edinb) 84 3-4 2004 218 227 (Pubitemid 38857854)
-
(2004)
Tuberculosis
, vol.84
, Issue.3-4
, pp. 218-227
-
-
Voskuil, M.I.1
Visconti, K.C.2
Schoolnik, G.K.3
-
29
-
-
33646359413
-
The hbhA gene of Mycobacterium tuberculosis is specifically upregulated in the lungs but not in the spleens of aerogenically infected mice
-
DOI 10.1128/IAI.74.5.3006-3011.2006
-
G. Delogu, M. Sanguinetti, B. Posteraro, S. Rocca, S. Zanetti, and G. Fadda The hbhA gene of Mycobacterium tuberculosis is specifically upregulated in the lungs but not in the spleens of aerogenically infected mice Infect Immun 74 5 2006 May 3006 3011 (Pubitemid 43673012)
-
(2006)
Infection and Immunity
, vol.74
, Issue.5
, pp. 3006-3011
-
-
Delogu, G.1
Sanguinetti, M.2
Posteraro, B.3
Rocca, S.4
Zanetti, S.5
Fadda, G.6
-
30
-
-
31344463710
-
Expression of the PE-PGRS 33 protein in Mycobacterium smegmatis triggers necrosis in macrophages and enhanced mycobacterial survival
-
V. Dheenadhayalan, G. Delogu, and M.J. Brennan Expression of the PE-PGRS 33 protein in Mycobacterium smegmatis triggers necrosis in macrophages and enhanced mycobacterial survival Microbes Infect 8 1 2006 January 262 272
-
(2006)
Microbes Infect
, vol.8
, Issue.1
, pp. 262-272
-
-
Dheenadhayalan, V.1
Delogu, G.2
Brennan, M.J.3
-
31
-
-
43049123412
-
Selection of genes of Mycobacterium tuberculosis upregulated during residence in lungs of infected mice
-
DOI 10.1016/j.tube.2007.10.002, PII S1472979207001308
-
V. Srivastava, A. Jain, B.S. Srivastava, and R. Srivastava Selection of genes of Mycobacterium tuberculosis upregulated during residence in lungs of infected mice Tuberculosis (Edinb) 88 3 2008 May 171 177 (Pubitemid 351626712)
-
(2008)
Tuberculosis
, vol.88
, Issue.3
, pp. 171-177
-
-
Srivastava, V.1
Jain, A.2
Srivastava, B.S.3
Srivastava, R.4
-
32
-
-
0034717008
-
Granuloma-specific expression of Mycobacterium virulence proteins from the glycine-rich PE-PGRS family
-
DOI 10.1126/science.288.5470.1436
-
L. Ramakrishnan, N.A. Federspiel, and S. Falkow Granuloma-specific expression of Mycobacterium virulence proteins from the glycine-rich PE-PGRS family Science 288 5470 2000 May 26 1436 1439 (Pubitemid 30366332)
-
(2000)
Science
, vol.288
, Issue.5470
, pp. 1436-1439
-
-
Ramakrishnan, L.1
Federspiel, N.A.2
Falkow, S.3
-
33
-
-
3042800116
-
Regulation of the Mycobacterium tuberculosis PE/PPE genes
-
DOI 10.1016/j.tube.2003.12.014, PII S1472979204000125
-
M.I. Voskuil, D. Schnappinger, R. Rutherford, Y. Liu, and G.K. Schoolnik Regulation of the Mycobacterium tuberculosis PE/PPE genes Tuberculosis (Edinb) 84 3-4 2004 256 262 (Pubitemid 38857858)
-
(2004)
Tuberculosis
, vol.84
, Issue.3-4
, pp. 256-262
-
-
Voskuil, M.I.1
Schnappinger, D.2
Rutherford, R.3
Liu, Y.4
Schoolnik, G.K.5
-
34
-
-
78449248081
-
Src homology 3-interacting domain of Rv1917c of Mycobacterium tuberculosis induces selective maturation of human dendritic cells by regulating PI3K-MAPK-NF-kappaB signaling and drives Th2 immune responses
-
K. Bansal, A.Y. Sinha, D.S. Ghorpade, S.K. Togarsimalemath, S.A. Patil, S.V. Kaveri, K.N. Balaji, and J. Bayry Src homology 3-interacting domain of Rv1917c of Mycobacterium tuberculosis induces selective maturation of human dendritic cells by regulating PI3K-MAPK-NF-kappaB signaling and drives Th2 immune responses J Biol Chem 285 47 2010 November 19 36511 36522
-
(2010)
J Biol Chem
, vol.285
, Issue.47
, pp. 36511-36522
-
-
Bansal, K.1
Sinha, A.Y.2
Ghorpade, D.S.3
Togarsimalemath, S.K.4
Patil, S.A.5
Kaveri, S.V.6
Balaji, K.N.7
Bayry, J.8
|