메뉴 건너뛰기




Volumn 193, Issue 22, 2011, Pages 6358-6365

The level of AdpA directly affects expression of developmental genes in Streptomyces coelicolor

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; PROTEIN ADPA; PROTEIN INHIBITOR; PROTEIN RAMR; REGULATOR PROTEIN; UNCLASSIFIED DRUG;

EID: 80655143412     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.05734-11     Document Type: Article
Times cited : (41)

References (43)
  • 1
    • 0028685490 scopus 로고
    • Fitting a mixture model by expectation maximization to discover motifs in biopolymers
    • Bailey, T. L., and C. Elkan. 1994. Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc. Int. Conf. Intell. Syst. Mol. Biol. 2:28-36.
    • (1994) Proc. Int. Conf. Intell. Syst. Mol. Biol. , vol.2 , pp. 28-36
    • Bailey, T.L.1    Elkan, C.2
  • 2
    • 0037046560 scopus 로고    scopus 로고
    • Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)
    • Bentley, S. D., et al. 2002. Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2). Nature 417:141-147.
    • (2002) Nature , vol.417 , pp. 141-147
    • Bentley, S.D.1
  • 3
    • 0002838747 scopus 로고    scopus 로고
    • Mycelial life style of Streptomyces coelicolor A3(2) and its relatives
    • J. A. Shapiro and M. Dworkin (ed.), Oxford University Press, Oxford, England
    • Chater, K. F., and R. Losick. 1997. Mycelial life style of Streptomyces coelicolor A3(2) and its relatives, p. 149-182. In J. A. Shapiro and M. Dworkin (ed.), Bacteria as multicellular organisms. Oxford University Press, Oxford, England.
    • (1997) Bacteria as multicellular organisms , pp. 149-182
    • Chater, K.F.1    Losick, R.2
  • 4
    • 0035195997 scopus 로고    scopus 로고
    • Regulation of sporulation in Streptomyces coelicolor A3(2): a checkpoint multiplex?
    • Chater, K. F. 2001. Regulation of sporulation in Streptomyces coelicolor A3(2): a checkpoint multiplex? Curr. Opin. Microbiol. 4:667-673.
    • (2001) Curr. Opin. Microbiol. , vol.4 , pp. 667-673
    • Chater, K.F.1
  • 5
    • 0037383031 scopus 로고    scopus 로고
    • Signalling early developmental events in two highly diverged Streptomyces species
    • Chater, K. F., and S. Horinouchi. 2003. Signalling early developmental events in two highly diverged Streptomyces species. Mol. Microbiol. 48:9-15.
    • (2003) Mol. Microbiol. , vol.48 , pp. 9-15
    • Chater, K.F.1    Horinouchi, S.2
  • 6
    • 33746865723 scopus 로고    scopus 로고
    • Streptomyces inside-out: a new perspective on the bacteria that provide us with antibiotics
    • Chater, K. F. 2006. Streptomyces inside-out: a new perspective on the bacteria that provide us with antibiotics. Philos. Trans. R. Soc. Lond. B Biol. Sci. 361:761-768.
    • (2006) Philos. Trans. R. Soc. Lond. B Biol. Sci. , vol.361 , pp. 761-768
    • Chater, K.F.1
  • 7
    • 43249102444 scopus 로고    scopus 로고
    • The use of the rare UUA codon to define "expression space" for genes involved in secondary metabolism, development and environmental adaptation in Streptomyces
    • Chater, K. F., and G. Chandra. 2008. The use of the rare UUA codon to define "expression space" for genes involved in secondary metabolism, development and environmental adaptation in Streptomyces. J. Microbiol. 46:1-11.
    • (2008) J. Microbiol. , vol.46 , pp. 1-11
    • Chater, K.F.1    Chandra, G.2
  • 8
    • 0032958485 scopus 로고    scopus 로고
    • Alteration of the synthesis of the Clp ATP-dependent protease affects morphological and physiological differentiation in Streptomyces
    • de Crécy-Lagard, V., P. Servant-Moisson, J. Viala, C. Grandvalet, and P. Mazodier. 1999. Alteration of the synthesis of the Clp ATP-dependent protease affects morphological and physiological differentiation in Streptomyces. Mol. Microbiol. 32:505-517.
    • (1999) Mol. Microbiol. , vol.32 , pp. 505-517
    • de Crécy-Lagard, V.1    Servant-Moisson, P.2    Viala, J.3    Grandvalet, C.4    Mazodier, P.5
  • 9
    • 55549086417 scopus 로고    scopus 로고
    • Streptomyces morphogenetics: dissecting differentiation in a filamentous bacterium
    • Flärdh, K., and M. J. Buttner. 2009. Streptomyces morphogenetics: dissecting differentiation in a filamentous bacterium. Nat. Rev. Microbiol. 7:36-49.
    • (2009) Nat. Rev. Microbiol. , vol.7 , pp. 36-49
    • Flärdh, K.1    Buttner, M.J.2
  • 10
    • 0037452723 scopus 로고    scopus 로고
    • PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin
    • Gust, B., G. L. Challis, K. Fowler, T. Kieser, and K. F. Chater. 2003. PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin. Proc. Natl. Acad. Sci. U. S. A. 100:1541-1546.
    • (2003) Proc. Natl. Acad. Sci. U. S. A , vol.100 , pp. 1541-1546
    • Gust, B.1    Challis, G.L.2    Fowler, K.3    Kieser, T.4    Chater, K.F.5
  • 11
    • 84860390298 scopus 로고    scopus 로고
    • Strict regulation of morphological differentiation and secondary metabolism by a positive feedback loop between two global regulators AdpA and BldA in Streptomyces griseus
    • Higo, A., S. Horinouchi, and Y. Ohnishi. 2011. Strict regulation of morphological differentiation and secondary metabolism by a positive feedback loop between two global regulators AdpA and BldA in Streptomyces griseus. Mol. Microbiol. 81:1607-1622.
    • (2011) Mol. Microbiol. , vol.81 , pp. 1607-1622
    • Higo, A.1    Horinouchi, S.2    Ohnishi, Y.3
  • 12
    • 33847408410 scopus 로고    scopus 로고
    • Mining and polishing of the treasure trove in the bacterial genus Streptomyces
    • Horinouchi, S. 2007. Mining and polishing of the treasure trove in the bacterial genus Streptomyces. Biosci. Biotechnol. Biochem. 71:283-299.
    • (2007) Biosci. Biotechnol. Biochem. , vol.71 , pp. 283-299
    • Horinouchi, S.1
  • 13
    • 0036051167 scopus 로고    scopus 로고
    • The ParB protein of Streptomyces coelicolor A3(2) recognizes a cluster of parS sequences within the origin-proximal region of the linear chromosome
    • Jakimowicz, D., K. Chater, and J. Zakrzewska-Czerwínska. 2002. The ParB protein of Streptomyces coelicolor A3(2) recognizes a cluster of parS sequences within the origin-proximal region of the linear chromosome. Mol. Microbiol. 45:1365-1377.
    • (2002) Mol. Microbiol. , vol.45 , pp. 1365-1377
    • Jakimowicz, D.1    Chater, K.2    Zakrzewska-Czerwínska, J.3
  • 14
    • 0036837749 scopus 로고    scopus 로고
    • Control by A-factor of a metalloendopeptidase gene involved in aerial mycelium formation in Streptomyces griseus
    • Kato, J. Y., A. Suzuki, H. Yamazaki, Y. Ohnishi, and S. Horinouchi. 2002. Control by A-factor of a metalloendopeptidase gene involved in aerial mycelium formation in Streptomyces griseus. J. Bacteriol. 184:6016-6025.
    • (2002) J. Bacteriol. , vol.184 , pp. 6016-6025
    • Kato, J.Y.1    Suzuki, A.2    Yamazaki, H.3    Ohnishi, Y.4    Horinouchi, S.5
  • 15
    • 23944526783 scopus 로고    scopus 로고
    • The Streptomyces subtilisin inhibitor (SSI) gene in Streptomyces coelicolor A3(2)
    • Kato, J. Y., S. Hirano, Y. Ohnishi, and S. Horinouchi. 2005. The Streptomyces subtilisin inhibitor (SSI) gene in Streptomyces coelicolor A3(2). Biosci. Biotechnol. Biochem. 69:1624-1629.
    • (2005) Biosci. Biotechnol. Biochem. , vol.69 , pp. 1624-1629
    • Kato, J.Y.1    Hirano, S.2    Ohnishi, Y.3    Horinouchi, S.4
  • 16
    • 20444379644 scopus 로고    scopus 로고
    • Autorepression of AdpA of the AraC/XylS family, a key transcriptional activator in the A-factor regulatory cascade in Streptomyces griseus
    • Kato, J. Y., Y. Ohnishi, and S. Horinouchi. 2005. Autorepression of AdpA of the AraC/XylS family, a key transcriptional activator in the A-factor regulatory cascade in Streptomyces griseus. J. Mol. Biol. 350:12-26.
    • (2005) J. Mol. Biol. , vol.350 , pp. 12-26
    • Kato, J.Y.1    Ohnishi, Y.2    Horinouchi, S.3
  • 19
    • 0029026469 scopus 로고
    • Physiological roles of leupeptin and extracellular proteases in mycelium development of Streptomyces exfoliatus SMF13
    • Kim, I. S., and K. J. Lee. 1995. Physiological roles of leupeptin and extracellular proteases in mycelium development of Streptomyces exfoliatus SMF13. Microbiology 141:1017-1025.
    • (1995) Microbiology , vol.141 , pp. 1017-1025
    • Kim, I.S.1    Lee, K.J.2
  • 20
    • 17644368169 scopus 로고    scopus 로고
    • Changes in the extracellular proteome caused by the absence of the bldA gene product, a developmentally significant Trna, reveal a new target for the pleiotropic regulator AdpA in Streptomyces coelicolor
    • Kim, D. W., K. Chater, K. J. Lee, and A. Hesketh. 2005. Changes in the extracellular proteome caused by the absence of the bldA gene product, a developmentally significant tRNA, reveal a new target for the pleiotropic regulator AdpA in Streptomyces coelicolor. J. Bacteriol. 187:2957-2966.
    • (2005) J. Bacteriol. , vol.187 , pp. 2957-2966
    • Kim, D.W.1    Chater, K.2    Lee, K.J.3    Hesketh, A.4
  • 21
    • 0026318809 scopus 로고
    • Analysis of the integration function of the streptomycete bacteriophage φC31
    • Kuhstoss, S., and R. N. Rao. 1991. Analysis of the integration function of the streptomycete bacteriophage φC31. J. Mol. Biol. 222:897-908.
    • (1991) J. Mol. Biol. , vol.222 , pp. 897-908
    • Kuhstoss, S.1    Rao, R.N.2
  • 22
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during assembly of the head of the bacteriophage T4
    • Laemmli, U. K. 1970. Cleavage of structural proteins during assembly of the head of the bacteriophage T4. Nature 227:680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 23
    • 77955342122 scopus 로고    scopus 로고
    • Morphological differentiation and clavulanic acid formation are affected in a Streptomyces clavuligerus adpA-deleted mutant
    • Lopez-Garcia, M. T., I. Santamarta, and P. Liras. 2010. Morphological differentiation and clavulanic acid formation are affected in a Streptomyces clavuligerus adpA-deleted mutant. Microbiology 156:2354-2365.
    • (2010) Microbiology , vol.156 , pp. 2354-2365
    • Lopez-Garcia, M.T.1    Santamarta, I.2    Liras, P.3
  • 24
    • 0028239531 scopus 로고
    • Cloning and analysis of a gene cluster from Streptomyces coelicolor that causes accelerated aerial mycelium formation in Streptomyces lividans
    • Ma, H., and K. Kendall. 1994. Cloning and analysis of a gene cluster from Streptomyces coelicolor that causes accelerated aerial mycelium formation in Streptomyces lividans. J. Bacteriol. 176:3800-3811.
    • (1994) J. Bacteriol. , vol.176 , pp. 3800-3811
    • Ma, H.1    Kendall, K.2
  • 25
    • 0033106405 scopus 로고    scopus 로고
    • Interactions of the Streptomyces lividans initiator protein DnaA with its target
    • Majka, J., et al. 1999. Interactions of the Streptomyces lividans initiator protein DnaA with its target. Eur. J. Biochem. 260:325-335.
    • (1999) Eur. J. Biochem. , vol.260 , pp. 325-335
    • Majka, J.1
  • 26
    • 23444446753 scopus 로고    scopus 로고
    • A bacterial one-hybrid system for determining the DNA-binding specificity of transcription factors
    • Meng, X., M. H. Brodsky, and S. A. Wolfe. 2005. A bacterial one-hybrid system for determining the DNA-binding specificity of transcription factors. Nat. Biotechnol. 23:988-994.
    • (2005) Nat. Biotechnol. , vol.23 , pp. 988-994
    • Meng, X.1    Brodsky, M.H.2    Wolfe, S.A.3
  • 27
    • 0030888558 scopus 로고    scopus 로고
    • DnaA initiator-also a transcription factor
    • Messer, W., and C. Weigel. 1997. DnaA initiator-also a transcription factor. Mol. Microbiol. 24:1-6.
    • (1997) Mol. Microbiol. , vol.24 , pp. 1-6
    • Messer, W.1    Weigel, C.2
  • 28
    • 0345529055 scopus 로고    scopus 로고
    • Colonial differentiation in Streptomyces coelicolor depends on translation of a specific codon within the adpA gene
    • Nguyen, K. T., et al. 2003. Colonial differentiation in Streptomyces coelicolor depends on translation of a specific codon within the adpA gene. J. Bacteriol. 185:7291-7296.
    • (2003) J. Bacteriol. , vol.185 , pp. 7291-7296
    • Nguyen, K.T.1
  • 29
    • 0033575318 scopus 로고    scopus 로고
    • Purification, characterization, and role of nucleases and serine proteases in Streptomyces differentiation. Analogies with the biochemical processes described in late steps of eukaryotic apoptosis
    • Nicieza, R. G., J. Huergo, B. A. Connolly, and J. Sanchez. 1999. Purification, characterization, and role of nucleases and serine proteases in Streptomyces differentiation. Analogies with the biochemical processes described in late steps of eukaryotic apoptosis. J. Biol. Chem. 274:20366-20375.
    • (1999) J. Biol. Chem. , vol.274 , pp. 20366-20375
    • Nicieza, R.G.1    Huergo, J.2    Connolly, B.A.3    Sanchez, J.4
  • 30
    • 17844392892 scopus 로고    scopus 로고
    • AdpA, a central transcriptional regulator in the A-factor regulatory cascade that leads to morphological development and secondary metabolism in Streptomyces griseus
    • Ohnishi, Y., H. Yamazaki, J. Y. Kato, A. Tomono, and S. Horinouchi. 2005. AdpA, a central transcriptional regulator in the A-factor regulatory cascade that leads to morphological development and secondary metabolism in Streptomyces griseus. Biosci. Biotechnol. Biochem. 69:431-439.
    • (2005) Biosci. Biotechnol. Biochem. , vol.69 , pp. 431-439
    • Ohnishi, Y.1    Yamazaki, H.2    Kato, J.Y.3    Tomono, A.4    Horinouchi, S.5
  • 31
    • 0032898961 scopus 로고    scopus 로고
    • Evidence that the extracytoplasmic function sigma factor E is required for normal cell wall structure in Streptomyces coelicolor A3(2)
    • Paget, M. S., L. Chamberlin, A. Atrih, S. J. Foster, and M. J. Buttner. 1999. Evidence that the extracytoplasmic function sigma factor E is required for normal cell wall structure in Streptomyces coelicolor A3(2). J. Bacteriol. 181:204-211.
    • (1999) J. Bacteriol. , vol.181 , pp. 204-211
    • Paget, M.S.1    Chamberlin, L.2    Atrih, A.3    Foster, S.J.4    Buttner, M.J.5
  • 32
    • 79952380621 scopus 로고    scopus 로고
    • tRNA accumulation and suppression of the bldA phenotype during development in Streptomyces coelicolor
    • Pettersson, B. M., and L. A. Kirsebom. 2011. tRNA accumulation and suppression of the bldA phenotype during development in Streptomyces coelicolor. Mol. Microbiol. 79:1602-1614.
    • (2011) Mol. Microbiol. , vol.79 , pp. 1602-1614
    • Pettersson, B.M.1    Kirsebom, L.A.2
  • 33
    • 85047691454 scopus 로고
    • Phagensensibilitat, ellwandzusammensetzung und Taxonomie von Actinomyceten
    • Prauser, H., and R. Falta. 1968. Phagensensibilitat, Zellwandzusammensetzung und Taxonomie von Actinomyceten. Z. Allg. Mikrobiol. 8:39-46.
    • (1968) ZZ. Allg. Mikrobiol , vol.8 , pp. 39-46
    • Prauser, H.1    Falta, R.2
  • 34
    • 0030035418 scopus 로고    scopus 로고
    • A set of ordered cosmids and a detailed genetic and physical map for the 8 Mb Streptomyces coelicolor A3(2) chromosome
    • Redenbach, M., et al. 1996. A set of ordered cosmids and a detailed genetic and physical map for the 8 Mb Streptomyces coelicolor A3(2) chromosome. Mol. Microbiol. 21:77-96.
    • (1996) Mol. Microbiol. , vol.21 , pp. 77-96
    • Redenbach, M.1
  • 36
    • 0001473216 scopus 로고
    • Formaldehyde-mediated DNAprotein crosslinking: a probe for in vivo chromatin structures
    • Solomon, M. J., and A. Varshavsky. 1985. Formaldehyde-mediated DNAprotein crosslinking: a probe for in vivo chromatin structures. Proc. Natl. Acad. Sci. U. S. A. 82:6470-6474.
    • (1985) Proc. Natl. Acad. Sci. U. S. A , vol.82 , pp. 6470-6474
    • Solomon, M.J.1    Varshavsky, A.2
  • 37
    • 0142125295 scopus 로고    scopus 로고
    • A rare leucine codon in adpA is implicated in the morphological defect of bldA mutants of S. coelicolor
    • Takano, E., et al. 2003. A rare leucine codon in adpA is implicated in the morphological defect of bldA mutants of S. coelicolor. Mol. Microbiol. 50: 475-486.
    • (2003) Mol. Microbiol. , vol.50 , pp. 475-486
    • Takano, E.1
  • 38
    • 0025861807 scopus 로고
    • Identification of an A-factor-dependent promoter in the streptomycin biosynthetic gene cluster of Streptomyces griseus
    • Vujaklija, D., K. Ueda, S. K. Hong, T. Beppu, and S. Horinouchi. 1991. Identification of an A-factor-dependent promoter in the streptomycin biosynthetic gene cluster of Streptomyces griseus. Mol. Gen. Genet. 229:119-128.
    • (1991) Mol. Gen. Genet. , vol.229 , pp. 119-128
    • Vujaklija, D.1    Ueda, K.2    Hong, S.K.3    Beppu, T.4    Horinouchi, S.5
  • 39
    • 0027251634 scopus 로고
    • Detection of an A-factorresponsive protein that binds to the upstream activation sequence of strR, a regulatory gene for streptomycin biosynthesis in Streptomyces griseus
    • Vujaklija, D., S. Horinouchi, and T. Beppu. 1993. Detection of an A-factorresponsive protein that binds to the upstream activation sequence of strR, a regulatory gene for streptomycin biosynthesis in Streptomyces griseus. J. Bacteriol. 175:2652-2661.
    • (1993) J. Bacteriol. , vol.175 , pp. 2652-2661
    • Vujaklija, D.1    Horinouchi, S.2    Beppu, T.3
  • 40
    • 0025883573 scopus 로고
    • Extracellular complementation of a developmental mutation implicates a small sporulation protein in aerial mycelium formation by S. coelicolor
    • Willey, J., R. Santamaria, J. Guijarro, M. Geistlich, and R. Losick. 1991. Extracellular complementation of a developmental mutation implicates a small sporulation protein in aerial mycelium formation by S. coelicolor. Cell 65:641-650.
    • (1991) Cell , vol.65 , pp. 641-650
    • Willey, J.1    Santamaria, R.2    Guijarro, J.3    Geistlich, M.4    Losick, R.5
  • 41
    • 75149138294 scopus 로고    scopus 로고
    • Regulation of morphological differentiation in S. coelicolor by RNase III (AbsB) cleavage of mRNA encoding the AdpA transcription factor
    • Xu, W., J. Huang, R. Lin, J. Shi, and S. N. Cohen. 2010. Regulation of morphological differentiation in S. coelicolor by RNase III (AbsB) cleavage of mRNA encoding the AdpA transcription factor. Mol. Microbiol. 75:781-791.
    • (2010) Mol. Microbiol. , vol.75 , pp. 781-791
    • Xu, W.1    Huang, J.2    Lin, R.3    Shi, J.4    Cohen, S.N.5
  • 42
    • 3242891579 scopus 로고    scopus 로고
    • DNAbinding specificity of AdpA, a transcriptional activator in the A-factor regulatory cascade in Streptomyces griseus
    • Yamazaki, H., A. Tomono, Y. Ohnishi, and S. Horinouchi. 2004. DNAbinding specificity of AdpA, a transcriptional activator in the A-factor regulatory cascade in Streptomyces griseus. Mol. Microbiol. 53:555-572.
    • (2004) Mol. Microbiol. , vol.53 , pp. 555-572
    • Yamazaki, H.1    Tomono, A.2    Ohnishi, Y.3    Horinouchi, S.4
  • 43
    • 22544464417 scopus 로고    scopus 로고
    • Architecture of bacterial replication initiation complexes: orisomes from four unrelated bacteria
    • Zawilak-Pawlik, A., et al. 2005. Architecture of bacterial replication initiation complexes: orisomes from four unrelated bacteria. Biochem. J. 389:471-481.
    • (2005) Biochem. J. , vol.389 , pp. 471-481
    • Zawilak-Pawlik, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.