-
1
-
-
0034705482
-
Thermodynamic and functional characterization of protein W from bacteriophage lambda. The three C-terminal residues are critical for activity
-
Maxwell KL, Davidson AR, Murialdo H, Gold M, (2000) Thermodynamic and functional characterization of protein W from bacteriophage lambda. The three C-terminal residues are critical for activity. J Biol Chem 275: 18879-18886.
-
(2000)
J Biol Chem
, vol.275
, pp. 18879-18886
-
-
Maxwell, K.L.1
Davidson, A.R.2
Murialdo, H.3
Gold, M.4
-
2
-
-
0345258031
-
The product of the bacteriophage lambda W gene: purification and properties
-
Murialdo H, Xing X, Tzamtzis D, Haddad A, Gold M, (2003) The product of the bacteriophage lambda W gene: purification and properties. Biochem Cell Biol 81: 307-315.
-
(2003)
Biochem Cell Biol
, vol.81
, pp. 307-315
-
-
Murialdo, H.1
Xing, X.2
Tzamtzis, D.3
Haddad, A.4
Gold, M.5
-
3
-
-
0035917324
-
The solution structure of bacteriophage lambda protein W, a small morphogenetic protein possessing a novel fold
-
Maxwell KL, Yee AA, Booth V, Arrowsmith CH, Gold M, et al. (2001) The solution structure of bacteriophage lambda protein W, a small morphogenetic protein possessing a novel fold. J Mol Biol 308: 9-14.
-
(2001)
J Mol Biol
, vol.308
, pp. 9-14
-
-
Maxwell, K.L.1
Yee, A.A.2
Booth, V.3
Arrowsmith, C.H.4
Gold, M.5
-
4
-
-
44949091517
-
Expanding the realm of ultrafast protein folding: gpW, a midsize natural single-domain with alpha+beta topology that folds downhill
-
Fung A, Li P, Godoy-Ruiz R, Sanchez-Ruiz JM, Muñoz V, (2008) Expanding the realm of ultrafast protein folding: gpW, a midsize natural single-domain with alpha+beta topology that folds downhill. J Am Chem Soc 130: 7489-7495.
-
(2008)
J Am Chem Soc
, vol.130
, pp. 7489-7495
-
-
Fung, A.1
Li, P.2
Godoy-Ruiz, R.3
Sanchez-Ruiz, J.M.4
Muñoz, V.5
-
5
-
-
46449085241
-
Energy minimizations with a combination of two knowledge-based potentials for protein folding
-
de Sancho D, Rey A, (2008) Energy minimizations with a combination of two knowledge-based potentials for protein folding. J Comp Chem 29: 1684-1692.
-
(2008)
J Comp Chem
, vol.29
, pp. 1684-1692
-
-
de Sancho, D.1
Rey, A.2
-
6
-
-
79953684009
-
Quantitative prediction of protein folding behaviors from a simple statistical model
-
Bruscolini P, Naganathan AN, (2011) Quantitative prediction of protein folding behaviors from a simple statistical model. J Am Chem Soc 133: 5372-5379.
-
(2011)
J Am Chem Soc
, vol.133
, pp. 5372-5379
-
-
Bruscolini, P.1
Naganathan, A.N.2
-
7
-
-
33746102627
-
Atom-by-atom analysis of global downhill protein folding
-
Sadqi M, Fushman D, Muñoz V, (2006) Atom-by-atom analysis of global downhill protein folding. Nature 442: 317-321.
-
(2006)
Nature
, vol.442
, pp. 317-321
-
-
Sadqi, M.1
Fushman, D.2
Muñoz, V.3
-
8
-
-
69149110300
-
Exploiting the downhill folding regime via experiment
-
Muñoz V, Sadqi M, Naganathan AN, de Sancho D, (2008) Exploiting the downhill folding regime via experiment. HFSP Journal 2: 342-353.
-
(2008)
HFSP Journal
, vol.2
, pp. 342-353
-
-
Muñoz, V.1
Sadqi, M.2
Naganathan, A.N.3
de Sancho, D.4
-
9
-
-
0032857781
-
Automated analysis of NMR assignments and structures for proteins
-
Moseley HN, Montelione GT, (1999) Automated analysis of NMR assignments and structures for proteins. Curr Opin Struct Biol 9: 635-642.
-
(1999)
Curr Opin Struct Biol
, vol.9
, pp. 635-642
-
-
Moseley, H.N.1
Montelione, G.T.2
-
10
-
-
58149468410
-
De novo protein structure generation from incomplete chemical shift assignments
-
Shen Y, Vernon R, Baker D, Bax A, (2009) De novo protein structure generation from incomplete chemical shift assignments. J Biomol NMR 43: 63-78.
-
(2009)
J Biomol NMR
, vol.43
, pp. 63-78
-
-
Shen, Y.1
Vernon, R.2
Baker, D.3
Bax, A.4
-
11
-
-
0030339738
-
AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR
-
Laskowski RA, Rullmannn JA, MacArthur MW, Kaptein R, Thornton JM, (1996) AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR. J Biomol NMR 8: 477-486.
-
(1996)
J Biomol NMR
, vol.8
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmannn, J.A.2
MacArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
12
-
-
12044252858
-
Methodological advances in protein NMR
-
Bax A, Grzesiek S, (1993) Methodological advances in protein NMR. Accounts Chem Res 26: 131-138.
-
(1993)
Accounts Chem Res
, vol.26
, pp. 131-138
-
-
Bax, A.1
Grzesiek, S.2
-
13
-
-
85133393741
-
-
Academic Press San Diego
-
Cavanagh J, Fairbrother WJ, Palmer AG(3rd), Rance M, Skelton NJ, (2006) Protein NMR spectroscopy: Princeples and practice; Academic Press San Diego.
-
(2006)
Protein NMR spectroscopy: Princeples and practice
-
-
Cavanagh, J.1
Fairbrother, W.J.2
Palmer III, A.G.3
Rance, M.4
Skelton, N.J.5
-
14
-
-
34547592557
-
MolProbity: all-atom contacts and structure validation for proteins and nucleic acids
-
Davis IW, Leaver-Fay A, Chen VB, Block JN, Kapral GJ, et al. (2007) MolProbity: all-atom contacts and structure validation for proteins and nucleic acids. Nucleic Acids Res 35: W375-W383.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 375-383
-
-
Davis, I.W.1
Leaver-Fay, A.2
Chen, V.B.3
Block, J.N.4
Kapral, G.J.5
-
15
-
-
0029983371
-
T7 vectors with modified T7lac promoter for expression of proteins in Escherichia coli
-
Peranen J, Rikkonen M, Hyvonen M, Kaariainen L, (1996) T7 vectors with modified T7lac promoter for expression of proteins in Escherichia coli. Anal Biochem 236: 371-373.
-
(1996)
Anal Biochem
, vol.236
, pp. 371-373
-
-
Peranen, J.1
Rikkonen, M.2
Hyvonen, M.3
Kaariainen, L.4
-
16
-
-
0029400480
-
NMRPipe: a multidimensional spectral processing system based on UNIX pipes
-
Delaglio F, Grzesiek S, Vuister GW, Zhu G, Pfeifer J, et al. (1995) NMRPipe: a multidimensional spectral processing system based on UNIX pipes. J Biomol NMR 6: 277-293.
-
(1995)
J Biomol NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
-
17
-
-
0000041361
-
A common sense approach to peak picking two-, three- and four-dimensional spectra using automatic computer analysis of contour diagrams
-
Garrett DS, Powers R, Gronenborn AM, Clore GM, (1991) A common sense approach to peak picking two-, three- and four-dimensional spectra using automatic computer analysis of contour diagrams. J Magn Reson 95: 216-220.
-
(1991)
J Magn Reson
, vol.95
, pp. 216-220
-
-
Garrett, D.S.1
Powers, R.2
Gronenborn, A.M.3
Clore, G.M.4
-
18
-
-
68349093958
-
TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts
-
Shen Y, Delaglio F, Cornilescu G, Bax A, (2009) TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts. J Biomol NMR 44: 213-223.
-
(2009)
J Biomol NMR
, vol.44
, pp. 213-223
-
-
Shen, Y.1
Delaglio, F.2
Cornilescu, G.3
Bax, A.4
-
19
-
-
0013293280
-
The Xplor-NIH NMR molecular structure determination package
-
Schwieters CD, Kuszewski JJ, Tjandra N, Clore GM, (2003) The Xplor-NIH NMR molecular structure determination package. J Magn Reson 160: 65-73.
-
(2003)
J Magn Reson
, vol.160
, pp. 65-73
-
-
Schwieters, C.D.1
Kuszewski, J.J.2
Tjandra, N.3
Clore, G.M.4
-
20
-
-
66749116183
-
-
DeLano, DeLano Scientific LLC, San Carlos, CA
-
DeLano (2004) The PyMOL Molecular Graphics System, DeLano Scientific LLC, San Carlos, CA.
-
(2004)
The PyMOL Molecular Graphics System
-
-
-
21
-
-
46249092554
-
GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation
-
Hess B, Kutzner C, van der Spoel D, Lindahl E, (2008) GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation. J Chem Theor Comp 4: 435-447.
-
(2008)
J Chem Theor Comp
, vol.4
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
van der Spoel, D.3
Lindahl, E.4
-
22
-
-
77950106854
-
Implementation of the CHARMM force field in GROMACS: Analysis of protein stability effects from correction maps, virtual interaction sites, and water models
-
Bjelkmar Pr, Larsson P, Cuendet MA, Hess B, Lindahl E, (2010) Implementation of the CHARMM force field in GROMACS: Analysis of protein stability effects from correction maps, virtual interaction sites, and water models. J Chem Theor Comp 6: 459-466.
-
(2010)
J Chem Theor Comp
, vol.6
, pp. 459-466
-
-
Bjelkmar, P.1
Larsson, P.2
Cuendet, M.A.3
Hess, B.4
Lindahl, E.5
-
23
-
-
4544369164
-
A generalized reaction field method for molecular dynamics simulations
-
Tironi IG, Sperb R, Smith PE, van Gunsteren WF, (1995) A generalized reaction field method for molecular dynamics simulations. J Chem Phys 102: 5451-5459.
-
(1995)
J Chem Phys
, vol.102
, pp. 5451-5459
-
-
Tironi, I.G.1
Sperb, R.2
Smith, P.E.3
van Gunsteren, W.F.4
-
24
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
Berendsen HJC, Postma JPM, van Gunsteren WF, DiNola A, Haak JR, (1984) Molecular dynamics with coupling to an external bath. J Chem Phys 81: 3684-3690.
-
(1984)
J Chem Phys
, vol.81
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
van Gunsteren, W.F.3
DiNola, A.4
Haak, J.R.5
-
25
-
-
0000388705
-
LINCS: A linear constraint solver for molecular simulations
-
Hess B, Bekker H, Berendsen HJC, Fraaije JGEM, (1997) LINCS: A linear constraint solver for molecular simulations. J Comp Chem 18: 1463-1472.
-
(1997)
J Comp Chem
, vol.18
, pp. 1463-1472
-
-
Hess, B.1
Bekker, H.2
Berendsen, H.J.C.3
Fraaije, J.G.E.M.4
|