Comparative expression profiling of E. coli and S. aureus inoculated primary mammary gland cells sampled from cows with different genetic predispositions for somatic cell score

Genetics Selection Evolution

Volumn 43, Issue 1, 2011, Pages

  Brand, Bodo ^a   Hartmann, Anja ^a   Repsilber, Dirk ^a   Griesbeck Zilch, Bettina ^b   Wellnitz, Olga ^c   Kühn, Christa ^a   Ponsuksili, Siriluck ^a   Meyer, Heinrich H D ^b   Schwerin, Manfred ^a,d  

^a LEIBNIZ INSTITUTE FOR FARM ANIMAL BIOLOGY FBN   (Germany)

^b TECHNICAL UNIVERSITY OF MUNICH   (Germany)

^c UNIVERSITY OF BERN   (Switzerland)

^d UNIVERSITY OF ROSTOCK   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIUM; CATTLE; COMPARATIVE STUDY; DISEASE INCIDENCE; GENE EXPRESSION; GENETIC ANALYSIS; GENETIC MARKER; HERITABILITY; INOCULATION; PATHOGEN; PHYSIOLOGY;

ANIMALIA; BOS; BOS TAURUS; BOVINAE; ESCHERICHIA COLI; STAPHYLOCOCCUS AUREUS;

ANIMAL; ANIMAL DISEASE; ARTICLE; BOVINE MASTITIS; CATTLE; CELL CULTURE; COMPARATIVE STUDY; CYTOLOGY; EPITHELIUM CELL; ESCHERICHIA COLI; ESCHERICHIA COLI INFECTION; FEMALE; GENE EXPRESSION PROFILING; GENETIC PREDISPOSITION; GENETICS; MALE; METABOLISM; MICROBIOLOGY; PHYSIOLOGY; QUANTITATIVE TRAIT LOCUS; STAPHYLOCOCCUS AUREUS; STAPHYLOCOCCUS INFECTION; UDDER;

ANIMALS; CATTLE; CELLS, CULTURED; EPITHELIAL CELLS; ESCHERICHIA COLI; ESCHERICHIA COLI INFECTIONS; FEMALE; GENE EXPRESSION PROFILING; GENETIC PREDISPOSITION TO DISEASE; MALE; MAMMARY GLANDS, ANIMAL; MASTITIS, BOVINE; QUANTITATIVE TRAIT LOCI; STAPHYLOCOCCAL INFECTIONS; STAPHYLOCOCCUS AUREUS;

EID: 80455132296     PISSN: 0999193X     EISSN: 12979686     Source Type: Journal    
DOI: 10.1186/1297-9686-43-24     Document Type: Article

References (54)

1. The costs of production diseases in dairy herds in England. Kossaibati MA, Esslemont RJ, Vet J 1997 154 41 51 (Pubitemid 127703008)
2. Production effects related to mastitis and mastitis economics in dairy cattle herds. Seegers H, Fourichon C, Beaudeau F, Vet Res 2003 34 475 491 (Pubitemid 37407268)
3. Quantitative trait loci mapping in dairy cattle: review and meta-analysis. Khatkar MS, Thomson PC, Tammen I, Raadsma HW, Genet Sel Evol 2004 36 163 190 (Pubitemid 38272284)
4. Database of cattle candidate genes and genetic markers for milk production and mastitis. Ogorevc J, Kunej T, Razpet A, Dovc P, Anim Genet 2009 40 832 851
5. Differentially expressed genes associated with Staphylococcus aureus mastitis of Canadian Holstein cows. Tao W, Mallard B, Vet Immunol Immunopathol 2007 120 201 211 (Pubitemid 47632805)
6. Escherichia coli infection induces distinct local and systemic transcriptome responses in the mammary gland. Mitterhuemer S, Petzl W, Krebs S, Mehne D, Klanner A, Wolf E, Zerbe H, Blum H, BMC Genomics 2010 11 138
7. Mammary gene expression profiles during an intramammary challenge reveal potential mechanisms linking negative energy balance with impaired immune response. Moyes KM, Drackley JK, Morin DE, Rodriguez-Zas SL, Everts RE, Lewin HA, Loor JJ, Physiol Genomics 2010 41 161 170
8. Assessment of the immune capacity of mammary epithelial cells: comparison with mammary tissue after challenge with Escherichia coli. Guenther J, Koczan D, Yang W, Nuernberg G, Repsilber D, Schuberth HJ, Park Z, Maqbool N, Molenaar A, Seyfert HM, Vet Res 2009 40 31
9. The antibacterial psoriasin is induced by E. coli infection in the bovine udder. Regenhard P, Petzl W, Zerbe H, Sauerwein H, Vet Microbiol 2010 143 293 298
10. Stimulated expression of TNF-alpha and IL-8, but not of lingual antimicrobial peptide reflects the concentration of pathogens contacting bovine mammary epithelial cells. Günther J, Liu SZ, Esch K, Schuberth HJ, Seyfert HM, Vet Immunol Immunopathol 2010 135 152 157
11. Evidence that bovine forebrain embryonic zinc finger-like gene influences immune response associated with mastitis resistance. Sugimoto M, Fujikawa A, Womack JE, Sugimoto Y, Proc Natl Acad Sci USA 2006 103 6454 6459
12. Analysis of key molecules of the innate immune system in mammary epithelial cells isolated from marker-assisted and conventionally selected cattle. Griesbeck-Zilch B, Osman M, Kühn C, Schwerin M, Bruckmaier RH, Pfaffl MW, Hammerle-Fickinger A, Meyer HHD, Wellnitz O, J Dairy Sci 2009 92 4621 4633
13. Ein Beitrag zur Feinkartierung von QTL-Regionen für Eutergesundheit beim Rind. Brink M, Schriftenreihe des Instituts für Tierzucht und Tierhaltung der Christian-Albrechts-Universität zu Kiel 2003 142 1 131
14. Refined positioning of a quantitative trait locus affecting somatic cell score on chromosome 18 in the German Holstein using linkage disequilibrium. Baes C, Brand B, Mayer M, Kühn C, Liu Z, Reinhardt F, Reinsch N, J Dairy Sci 2009 92 4046 4054
15. Identification of a two-marker-haplotype on Bos taurus autosome 18 associated with somatic cell score in German Holstein cattle. Brand B, Baes C, Mayer M, Reinsch N, Kuehn C, BMC Genetics 2009 10 50
16. Quantitative trait loci mapping of functional traits in the German Holstein cattle population. Kühn C, Bennewitz J, Reinsch N, Xu N, Thomsen H, Looft C, Brockmann GA, Schwerin M, Weimann C, Hiendleder S, Erhardt G, Medjugorac I, Forster M, Brenig B, Reinhardt F, Reents R, Russ I, Averdunk G, Blumel J, Kalm E, J Dairy Sci 2003 86 360 368 (Pubitemid 39067189)
17. Confirmation of quantitative trait loci for somatic cell score on bovine chromosome 18 in the German Holstein. Xu N, Paul S, Bennewitz J, Reinsch N, Thaller G, Reinhardt F, Kühn C, Schwerin M, Erhardt G, Weimann C, Thomsen H, Mishra S, Kalm E, Arch Tierz 2006 49 111 119
18. Quantitative trait loci affecting health traits in Swedish dairy cattle. Holmberg M, Andersson-Eklund L, J Dairy Sci 2004 87 2653 2659 (Pubitemid 39103993)
19. Joint analysis of quantitative trait loci for clinical mastitis and somatic cell score on five chromosomes in three Nordic dairy cattle breeds. Lund MS, Sahana G, Andersson-Eklund L, Hastings N, Fernandez A, Schulman N, Thomsen B, Viitala S, Williams JL, Sabry A, Viinalass H, Vilkki J, J Dairy Sci 2007 90 5282 5290 (Pubitemid 351455417)
20. Whole genome scan to detect quantitative trait loci for conformation and functional traits in dairy cattle. Schrooten C, Bovenhuis H, Coppieters W, Van Arendonk JAM, J Dairy Sci 2000 83 795 806
21. Quantitative trait loci for health traits in Finnish Ayrshire cattle. Schulman NF, Viitala SM, de Koning DJ, Virta J, Maki-Tanila A, Vilkki JH, J Dairy Sci 2004 87 443 449 (Pubitemid 44145415)
22. Genetic analyses of mastitis data using animal threshold models and genetic correlation with production traits. Hinrichs D, Stamer E, Junge W, Kalm E, J Dairy Sci 2005 88 2260 2268 (Pubitemid 41431206)
23. Quantitative trait loci mapping of calving and conformation traits on Bos taurus autosome 18 in the German Holstein population. Brand B, Baes C, Mayer M, Reinsch N, Seidenspinner T, Thaller G, Kühn C, J Dairy Sci 2010 93 1205 1215
24. A whole-genome scan to map quantitative trait loci for conformation and functional traits in Canadian Holstein bulls. Kolbehdari D, Wang Z, Grant JR, Murdoch B, Prasad A, Xiu Z, Marques E, Stothard P, Moore SS, J Dairy Sci 2008 91 2844 2856 (Pubitemid 351976606)
25. Genetics of resistance to mastitis in dairy cattle. Rupp R, Boichard D, Vet Res 2003 34 671 688 (Pubitemid 37407276)
26. The genome sequence of taurine cattle: A window to ruminant biology and evolution. The Bovine Genome Sequencing and Analysis Consortium, Elsik CG, Tellam RL, Worley KC, Science 2009 324 522-528
27. Marker assisted selection of heifers improved milk somatic cell count compared to selection on conventional pedigree breeding values. Kühn C, Reinhardt F, Schwerin M, Arch Tierz 2008 51 23 32 (Pubitemid 351353806)
28. Clustering short time series gene expression data. Ernst J, Nau GJ, Bar-Joseph Z, Bioinformatics 2005 21 159 i168
29. STEM: a tool for the analysis of short time series gene expression data. Ernst J, Bar-Joseph Z, BMC Bioinformatics 2006 7 191
30. Cryopreserved bovine mammary cells to model epithelial response to infection. Wellnitz O, Kerr DE, Vet Immunol Immunopathol 2004 101 191 202 (Pubitemid 39178378)
31. Immune relevant gene expression of mammary epithelial cells and their influence on leukocyte chemotaxis in response to different mastitis pathogens. Wellnitz O, Reith P, Haas SC, Meyer HHD, Vet Med (Praha) 2006 51 125 132
32. Bioconductor: open software development for computational biology and bioinformatics. Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge YC, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JYH, Zhang JH, Genome Biol 2004 5 80
33. Gene Expression Omnibus (GEO). http://www.ncbi.nlm.nih.gov/projects/geo/
34. Summaries of Affymetrix GeneChip probe level data. Irizarry RA, Bolstad BM, Collin F, Cope LM, Hobbs B, Speed TP, Nucl Acids Res 2003 31 15
35. Comparative analysis of Bos taurus and Homo sapiens DNA microarrays. Hintermair V, Master's Thesis, Technical University, Munich 2007
36. Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Smyth GK, Stat Appl Genet Mol Biol 2004 3 Article 3
37. Effects of threshold choice on biological conclusions reached during analysis of gene expression by DNA microarrays. Pan KH, Lih CJ, Cohen SN, Proc Natl Acad Sci USA 2005 102 8961 8965 (Pubitemid 40881061)
38. Ingenuity Systems. http://www.ingenuity.com
39. TM4: A free, open-source system for microarray data management and analysis. Saeed AI, Sharov V, White J, Li J, Liang W, Bhagabati N, Braisted J, Klapa M, Currier T, Thiagarajan M, Sturn A, Snuffin M, Rezantsev A, Popov D, Ryltsov A, Kostukovich E, Borisovsky I, Liu Z, Vinsavich A, Trush V, Quackenbush J, Biotechniques 2003 34 374 378 (Pubitemid 36184095)
40. TM4 microarray software suite. Saeed AI, Hagabati NK, Braisted JC, Liang W, Sharov V, Howe EA, Li JW, Thiagarajan M, White JA, Quackenbush J, Methods Enzymol 2006 411 134 193
41. Innate immunity of the bovine mammary gland. Rainard P, Riollet C, Vet Res 2006 37 369 400 (Pubitemid 43725027)
42. Mastitis increases mammary mRNA abundance of beta-Defensin 5, Toll-Like-Receptor 2 (TLR2), and TLR4 but not TLR9 in cattle. Goldammer T, Zerbe H, Molenaar A, Schuberth HJ, Brunner RM, Kata SR, Seyfert HM, Clin Diagn Lab Immunol 2004 11 174 185 (Pubitemid 38090673)
43. Persistence of a Staphylococcus aureus small colony variants (S.aureus SCV) within bovine mammary epithelial cells. Atalla H, Gyles C, Mallard B, Vet Microbiol 2010 143 319 328
44. Staphylococcus aureus and Escherichia coli cause deviating expression profiles of cytokines and lactoferrin messenger ribonucleic acid in mammary epithelial cells. Griesbeck-Zilch B, Meyer HHD, Kühn CH, Schwerin M, Wellnitz O, J Dairy Sci 2008 91 2215 2224 (Pubitemid 351807965)
45. Transcriptome profiling of Streptococcus uberis-induced mastitis reveals fundamental differences between immune gene expression in the mammary gland and in a primary cell culture model. Swanson K, Stelwagen K, Dobson J, Henderson H, Davis S, Farr V, Singh K, J Dairy Sci 2009 92 117 129
46. Lipopolysaccharide and lipoteichoic acid induce different innate immune responses in bovine mammary epithelial cells. Strandberg Y, Gray C, Vuocolo T, Donaldson L, Broadway M, Tellam R, Cytokine 2005 31 72 86 (Pubitemid 40828361)
47. Characterization of cytokine expression in milk somatic cells during intramammary infections with Escherichia coli or Staphylococcus aureus by real-time PCR. Lee J-W, Bannerman DD, Paape JM, Huang M-K, Zhao X, Vet Res 2006 37 219 229
48. Escherichia coli, but not Staphylococcus aureus triggers an early increased expression of factors contributing to the innate immune defense in the udder of the cow. Petzl W, Zerbe H, Günther J, Yang W, Seyfert HM, Nürnberg G, Schuberth HJ, Vet Res 2008 39 18
49. Differential transcriptional response to Staphylococcus aureus infection in two divergent lines of sheep selected on milk somatic cell score. Bonnefont C, Foucras G, Toufeer M, Caubet C, Aurel MR, Robert-Granié C, Cunha P, Gilbert F, Rainard P, Rupp R, Proceedings of the 9th World Congress on Genetics Applied to Livestock Production: 1-6 August 2010 Leipzig 2010 http://www.kongressband.de/wcgalp2010/assets/pdf/0449.pdf
50. Essential role of neutrophils but not mammary alveolar macrophages in a murine model of acute Escherichia coli mastitis. Elazar S, Gonen E, Livneh-Kol A, Rosenshine I, Shpigel NY, Vet Res 2010 41 53
51. Non-canonical NF-kappaB signaling pathway. Sun SC, Cell Res 2011 21 71 85
52. Cutting edge: NF-kappaB2 is a negative regulator of dendritic cell function. Speirs K, Lieberman L, Caamano J, Hunter CA, Scott P, J Immunol 2004 172 752 756 (Pubitemid 38113729)
53. Multiorgan inflammation and hematopoietic abnormalities in mice with a targeted disruption of RelB, a member of the NF-kappaB/Rel family. Weih F, Carrasco D, Durham SK, Barton DS, Rizzo CA, Ryseck RP, Lira SA, Bravo R, Cell 1995 80 331 340
54. RelB modulation of IkappaBalpha stability as a mechanism of transcription suppression of Interleukin-1 alpha (IL-1 alpha), IL-1 beta, and tumor necrosis factor alpha in fibroblasts. Xia Y, Chen S, Wang Y, Mackman N, Ku G, Lo D, Feng L, Mol Cell Biol 1999 19 7688 7696 (Pubitemid 29493432)