-
1
-
-
0014686899
-
Free energy changes and metabolic regulation in steady state photosynthetic carbon reduction
-
10.1016/0005-2728(69)90048-6, 5350447
-
Bassham JA, Krause GH. Free energy changes and metabolic regulation in steady state photosynthetic carbon reduction. Biochim Biophys Acta 1969, 189:207-221. 10.1016/0005-2728(69)90048-6, 5350447.
-
(1969)
Biochim Biophys Acta
, vol.189
, pp. 207-221
-
-
Bassham, J.A.1
Krause, G.H.2
-
2
-
-
0024288428
-
A mathematical model of the Calvin photosynthesis cycle
-
10.1111/j.1432-1033.1988.tb14242.x, 3137030
-
Pettersson G, Ryde-Pettersson U. A mathematical model of the Calvin photosynthesis cycle. Eur J Biochem 1988, 175:661-672. 10.1111/j.1432-1033.1988.tb14242.x, 3137030.
-
(1988)
Eur J Biochem
, vol.175
, pp. 661-672
-
-
Pettersson, G.1
Ryde-Pettersson, U.2
-
3
-
-
35348928051
-
Optimizing the distribution of resources between enzymes of carbon metabolism can dramatically increase photosynthetic rate: a numerical simulation using an evolutionary algorithm
-
10.1104/pp.107.103713, 2048738, 17720759
-
Zhu XG, de Sturler E, Long SP. Optimizing the distribution of resources between enzymes of carbon metabolism can dramatically increase photosynthetic rate: a numerical simulation using an evolutionary algorithm. Plant Physiol 2007, 145:513-526. 10.1104/pp.107.103713, 2048738, 17720759.
-
(2007)
Plant Physiol
, vol.145
, pp. 513-526
-
-
Zhu, X.G.1
de Sturler, E.2
Long, S.P.3
-
4
-
-
58849135386
-
Flux balance analysis of primary metabolism in Chlamydomonas reinhardtii
-
2628641, 19128495
-
Boyle NR, Morgan JA. Flux balance analysis of primary metabolism in Chlamydomonas reinhardtii. BMC Syst Biol 2009, 3:4. 2628641, 19128495.
-
(2009)
BMC Syst Biol
, vol.3
, pp. 4
-
-
Boyle, N.R.1
Morgan, J.A.2
-
5
-
-
77956710803
-
The Metabolic Network of Synechocystis sp. PCC 6803: Systemic Properties of Autotrophic Growth
-
10.1104/pp.110.157198, 2938163, 20616194
-
Knoop H, Zilliges Y, Lockau W, Steuer R. The Metabolic Network of Synechocystis sp. PCC 6803: Systemic Properties of Autotrophic Growth. Plant Physiology 2010, 154:410-422. 10.1104/pp.110.157198, 2938163, 20616194.
-
(2010)
Plant Physiology
, vol.154
, pp. 410-422
-
-
Knoop, H.1
Zilliges, Y.2
Lockau, W.3
Steuer, R.4
-
6
-
-
78349292275
-
Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium
-
10.1186/1752-0509-4-156, 3009638, 21083885
-
Montagud A, Navarro E, de Cordoba PF, Urchueguía JF, Patil KR. Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium. BMC Syst Biol 2010, 4:156. 10.1186/1752-0509-4-156, 3009638, 21083885.
-
(2010)
BMC Syst Biol
, vol.4
, pp. 156
-
-
Montagud, A.1
Navarro, E.2
de Cordoba, P.F.3
Urchueguía, J.F.4
Patil, K.R.5
-
7
-
-
77952643400
-
Integrated stoichiometric, thermodynamic and kinetic modelling of steady state metabolism
-
Fleming RMT, Thiele I, Provan G, Nasheuer HP. Integrated stoichiometric, thermodynamic and kinetic modelling of steady state metabolism. JTB 2010, 264:683-692.
-
(2010)
JTB
, vol.264
, pp. 683-692
-
-
Fleming, R.M.T.1
Thiele, I.2
Provan, G.3
Nasheuer, H.P.4
-
8
-
-
79957637424
-
A Survey on Methods for Modeling and Analyzing Integrated Biological Networks
-
Tenazinha N, Vinga S. A Survey on Methods for Modeling and Analyzing Integrated Biological Networks. TCBB 2011, 8:943-958.
-
(2011)
TCBB
, vol.8
, pp. 943-958
-
-
Tenazinha, N.1
Vinga, S.2
-
10
-
-
78751703494
-
E-photosynthesis: Web-based platform for modeling of complex photosynthetic processes
-
10.1016/j.biosystems.2010.10.013, 21073914
-
Safranek D, Cerveny J, Klement M, Pospisilova J, Brim L, Lazar D, Nedbal L. E-photosynthesis: Web-based platform for modeling of complex photosynthetic processes. BioSystems 2011, 103:115-124. 10.1016/j.biosystems.2010.10.013, 21073914.
-
(2011)
BioSystems
, vol.103
, pp. 115-124
-
-
Safranek, D.1
Cerveny, J.2
Klement, M.3
Pospisilova, J.4
Brim, L.5
Lazar, D.6
Nedbal, L.7
-
11
-
-
60849136046
-
A simple model of the Calvin cycle has only one physiologically feasible steady state under the same external conditions
-
Zhu X, Alba R, de Sturler E. A simple model of the Calvin cycle has only one physiologically feasible steady state under the same external conditions. Nonlinear Anal-Real 2009, 3:1490-1499.
-
(2009)
Nonlinear Anal-Real
, vol.3
, pp. 1490-1499
-
-
Zhu, X.1
Alba, R.2
de Sturler, E.3
-
12
-
-
78751705367
-
Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities
-
10.1016/j.biosystems.2010.10.015, 21075168
-
Grimbs S, Arnold A, Koseska A, Kurths J, Selbig J, Nikoloski Z. Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities. BioSystems 2011, 103:212-223. 10.1016/j.biosystems.2010.10.015, 21075168.
-
(2011)
BioSystems
, vol.103
, pp. 212-223
-
-
Grimbs, S.1
Arnold, A.2
Koseska, A.3
Kurths, J.4
Selbig, J.5
Nikoloski, Z.6
-
13
-
-
33845368513
-
COPASI - a COmplex PAthway SImulator
-
10.1093/bioinformatics/btl485, 17032683
-
Hoops S, Sahle S, Gauges R, Lee C, Pahle J, Simus N, Singhal M, Xu L, Mendes P, Kummer U. COPASI - a COmplex PAthway SImulator. Bioinformatics 2006, 22:3067-74. 10.1093/bioinformatics/btl485, 17032683.
-
(2006)
Bioinformatics
, vol.22
, pp. 3067-3074
-
-
Hoops, S.1
Sahle, S.2
Gauges, R.3
Lee, C.4
Pahle, J.5
Simus, N.6
Singhal, M.7
Xu, L.8
Mendes, P.9
Kummer, U.10
-
14
-
-
17844380032
-
Experimental and theoretical study on high temperature induced changes in chlorophyll a fluorescence oscillations in barley leaves upon 2% CO2
-
Lazar D, Kana R, Klinkovsky T, Naus J. Experimental and theoretical study on high temperature induced changes in chlorophyll a fluorescence oscillations in barley leaves upon 2% CO2. Photosynthetica 2005, 3:13-27.
-
(2005)
Photosynthetica
, vol.3
, pp. 13-27
-
-
Lazar, D.1
Kana, R.2
Klinkovsky, T.3
Naus, J.4
-
15
-
-
0013393433
-
A mathematical model of leaf carbon metabolism
-
Hahn BD. A mathematical model of leaf carbon metabolism. Annals of Botany 1984, 54:325-339.
-
(1984)
Annals of Botany
, vol.54
, pp. 325-339
-
-
Hahn, B.D.1
-
16
-
-
17844394123
-
A Mathematical Model of the Calvin Cycle: Analysis of the Steady State
-
Hahn BD. A Mathematical Model of the Calvin Cycle: Analysis of the Steady State. Annals of Botany 1986, 57:639-653.
-
(1986)
Annals of Botany
, vol.57
, pp. 639-653
-
-
Hahn, B.D.1
-
17
-
-
0011275941
-
A mathematical model of photorespiration and photosynthesis
-
Hahn BD. A mathematical model of photorespiration and photosynthesis. Annals of Botany 1987, 60:157-169.
-
(1987)
Annals of Botany
, vol.60
, pp. 157-169
-
-
Hahn, B.D.1
-
18
-
-
0000481207
-
Control of the rate of photosynthetic carbon dioxide fixation
-
Woodrow IE. Control of the rate of photosynthetic carbon dioxide fixation. Biochim Biophy Acta 1986, 851:181-192.
-
(1986)
Biochim Biophy Acta
, vol.851
, pp. 181-192
-
-
Woodrow, I.E.1
-
19
-
-
0000395061
-
A mathematical model of the carbon metabolism in photosynthesis. Difficulties in explaining oscillations by fructose 2,6-bisphosphate regulation
-
Laisk A, Eichelmann H, Oja V, Eatherall A, Walker DA. A mathematical model of the carbon metabolism in photosynthesis. Difficulties in explaining oscillations by fructose 2,6-bisphosphate regulation. Proc R Soc Lond B Biol Sci 1989, 237:389-415.
-
(1989)
Proc R Soc Lond B Biol Sci
, vol.237
, pp. 389-415
-
-
Laisk, A.1
Eichelmann, H.2
Oja, V.3
Eatherall, A.4
Walker, D.A.5
-
20
-
-
0000581445
-
Modeling C3 photosynthesis--a sensitivity analysis of the photosynthetic carbon reduction cycle
-
Woodrow IE, Mott KA. Modeling C3 photosynthesis--a sensitivity analysis of the photosynthetic carbon reduction cycle. Planta 1993, 191:421-432.
-
(1993)
Planta
, vol.191
, pp. 421-432
-
-
Woodrow, I.E.1
Mott, K.A.2
-
21
-
-
2942627409
-
Applications of metabolic modelling to plant metabolism
-
10.1093/jxb/erh090, 15073223
-
Poolman MG, Assmus HE, Fell DA. Applications of metabolic modelling to plant metabolism. J Exp Bot 2004, 55:1177-1186. 10.1093/jxb/erh090, 15073223.
-
(2004)
J Exp Bot
, vol.55
, pp. 1177-1186
-
-
Poolman, M.G.1
Assmus, H.E.2
Fell, D.A.3
-
23
-
-
0020039144
-
Internal pH and ATP-ADP pools in the cyanobacterium Synechococcus sp. During exposure to growth-inhibiting low pH
-
Kallas T, Castenholz RW. Internal pH and ATP-ADP pools in the cyanobacterium Synechococcus sp. During exposure to growth-inhibiting low pH. Journal of Bacterology 1982, 149:229-236.
-
(1982)
Journal of Bacterology
, vol.149
, pp. 229-236
-
-
Kallas, T.1
Castenholz, R.W.2
-
24
-
-
0017377116
-
Fructose- and sedoheptulosebisphosphatase. The sites of a possible control of CO2 fixation by light-dependent changes of the stromal Mg 2+ concentration
-
10.1016/0005-2728(77)90181-5, 19060
-
Portis AR, Chon CJ, Mosbach A, Heldt HW. Fructose- and sedoheptulosebisphosphatase. The sites of a possible control of CO2 fixation by light-dependent changes of the stromal Mg 2+ concentration. Biochim Biophys Acta 1977, 461:313-325. 10.1016/0005-2728(77)90181-5, 19060.
-
(1977)
Biochim Biophys Acta
, vol.461
, pp. 313-325
-
-
Portis, A.R.1
Chon, C.J.2
Mosbach, A.3
Heldt, H.W.4
-
25
-
-
0019317731
-
Metabolite levels during induction in the chloroplast and extrachloroplast compartments of spinach protoplasts
-
10.1016/0005-2728(80)90010-9, 7426648
-
Stitt M, Wirtz W, Heldt HW. Metabolite levels during induction in the chloroplast and extrachloroplast compartments of spinach protoplasts. Biochim Biophys Acta 1980, 593:85-102. 10.1016/0005-2728(80)90010-9, 7426648.
-
(1980)
Biochim Biophys Acta
, vol.593
, pp. 85-102
-
-
Stitt, M.1
Wirtz, W.2
Heldt, H.W.3
-
26
-
-
0029067816
-
Transketolase A of Escherichia coli K12. Purification and properties of the enzyme from recombinant strains
-
10.1111/j.1432-1033.1995.0525h.x, 7607225
-
Sprenger GA, Schorken U, Sprenger G, Sahm H. Transketolase A of Escherichia coli K12. Purification and properties of the enzyme from recombinant strains. Eur J Biochem 1995, 230:525-532. 10.1111/j.1432-1033.1995.0525h.x, 7607225.
-
(1995)
Eur J Biochem
, vol.230
, pp. 525-532
-
-
Sprenger, G.A.1
Schorken, U.2
Sprenger, G.3
Sahm, H.4
-
27
-
-
0000056033
-
Rate limitation of non-steady-state photosynthesis by ribulose-1,5-bisphosphate carboxylase in spinach
-
Woodrow IE, Mott KA. Rate limitation of non-steady-state photosynthesis by ribulose-1,5-bisphosphate carboxylase in spinach. Aust J Plant Physiol 1989, 16:487-500.
-
(1989)
Aust J Plant Physiol
, vol.16
, pp. 487-500
-
-
Woodrow, I.E.1
Mott, K.A.2
-
28
-
-
47149111033
-
Acceleration of plastoquinone pool reduction by alternative pathways precedes a decrease in photosynthetic CO2 assimilation in preheated barley leaves
-
10.1111/j.1399-3054.2008.01094.x, 18494737
-
Kana R, Kotabova E, Prasil O. Acceleration of plastoquinone pool reduction by alternative pathways precedes a decrease in photosynthetic CO2 assimilation in preheated barley leaves. Physiol Plant 2008, 133:794-806. 10.1111/j.1399-3054.2008.01094.x, 18494737.
-
(2008)
Physiol Plant
, vol.133
, pp. 794-806
-
-
Kana, R.1
Kotabova, E.2
Prasil, O.3
-
29
-
-
44949274235
-
Partial purification and kinetic characterization of transaldolase from Dictyostelium discoideum
-
Albe KR. Partial purification and kinetic characterization of transaldolase from Dictyostelium discoideum. Exp Mycol 1991, 15:255-62.
-
(1991)
Exp Mycol
, vol.15
, pp. 255-262
-
-
Albe, K.R.1
-
30
-
-
0019879667
-
Interaction of sugar phosphate with the catalytic site of RuBP-carboxylase
-
10.1021/bi00511a023, 7236594
-
Badger MR, Lorimer G. Interaction of sugar phosphate with the catalytic site of RuBP-carboxylase. Biochemistry 1981, 20:2219-2225. 10.1021/bi00511a023, 7236594.
-
(1981)
Biochemistry
, vol.20
, pp. 2219-2225
-
-
Badger, M.R.1
Lorimer, G.2
-
31
-
-
0018462604
-
Models describing the kinetics of ribulose biphosphate carboxylase-oxygenase
-
10.1016/0003-9861(79)90052-3, 464606
-
Farquhar GD. Models describing the kinetics of ribulose biphosphate carboxylase-oxygenase. Arch Biochem Biophys 1979, 193:456-468. 10.1016/0003-9861(79)90052-3, 464606.
-
(1979)
Arch Biochem Biophys
, vol.193
, pp. 456-468
-
-
Farquhar, G.D.1
-
32
-
-
0003929449
-
Biochemical Models of Leaf Photosynthesis
-
Victoria, Australia, Techniques in Plant Sciences Series. CSIRO Publishing
-
von Caemmerer S. Biochemical Models of Leaf Photosynthesis. 2000, 1-28. Victoria, Australia, Techniques in Plant Sciences Series. CSIRO Publishing.
-
(2000)
, pp. 1-28
-
-
von Caemmerer, S.1
|