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Volumn 61, Issue 3, 2011, Pages 628-638

Phylogenetic relationships within Echinococcus and Taenia tapeworms (Cestoda: Taeniidae): An inference from nuclear protein-coding genes

Author keywords

Divergence time estimation; Echinococcus; Nuclear DNA phylogeny; Protein coding genes; Taenia; Taeniidae

Indexed keywords

HELMINTH DNA; NUCLEAR PROTEIN; RNA POLYMERASE II;

EID: 80055115635     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2011.07.022     Document Type: Article
Times cited : (114)

References (64)
  • 1
    • 0003257793 scopus 로고
    • Principles of Cestodology
    • Izdatel'stvo Nauka, Moskow, English translation, Israel Program for Scientific Translations, 1970)
    • Abuladze K.I. Principles of Cestodology. Taeniata of Animals and Man and Diseases Caused by Them 1964, vol. IV. Izdatel'stvo Nauka, Moskow, (p. 530, English translation, Israel Program for Scientific Translations, 1970).
    • (1964) Taeniata of Animals and Man and Diseases Caused by Them , vol.4 , pp. 530
    • Abuladze, K.I.1
  • 2
    • 46749144988 scopus 로고    scopus 로고
    • Using mitochondrial and nuclear markers to evaluate the degree of genetic cohesion among Echinococcus populations
    • Badaraco J.L., Ayala F.J., Bart J.M., Gottstein B., Haag K.L. Using mitochondrial and nuclear markers to evaluate the degree of genetic cohesion among Echinococcus populations. Experimental Parasitology 2008, 119:453-459.
    • (2008) Experimental Parasitology , vol.119 , pp. 453-459
    • Badaraco, J.L.1    Ayala, F.J.2    Bart, J.M.3    Gottstein, B.4    Haag, K.L.5
  • 3
    • 1642285792 scopus 로고    scopus 로고
    • The incomplete natural history of mitochondria
    • Ballard J.W., Whitlock M.C. The incomplete natural history of mitochondria. Molecular Ecology 2004, 13:729-744.
    • (2004) Molecular Ecology , vol.13 , pp. 729-744
    • Ballard, J.W.1    Whitlock, M.C.2
  • 4
    • 0036699888 scopus 로고    scopus 로고
    • The utility of the incongruence length difference test
    • Barker F.K., Lutzoni F.M. The utility of the incongruence length difference test. Systematic Biology 2002, 51:625-637.
    • (2002) Systematic Biology , vol.51 , pp. 625-637
    • Barker, F.K.1    Lutzoni, F.M.2
  • 5
    • 0028946617 scopus 로고
    • A molecular phylogeny of the genus Echinococcus
    • Bowles J., Blair D., McManus D.P. A molecular phylogeny of the genus Echinococcus. Parasitology 1995, 110:317-328.
    • (1995) Parasitology , vol.110 , pp. 317-328
    • Bowles, J.1    Blair, D.2    McManus, D.P.3
  • 6
    • 42349100318 scopus 로고    scopus 로고
    • New aspects of neotropical polycystic (Echinococcus vogeli) and unicystic (Echinococcus oligarthrus) echinococcosis
    • D'Alessandro A., Rausch R.L. New aspects of neotropical polycystic (Echinococcus vogeli) and unicystic (Echinococcus oligarthrus) echinococcosis. Clinical Microbiology Reviews 2008, 21:380-401.
    • (2008) Clinical Microbiology Reviews , vol.21 , pp. 380-401
    • D'Alessandro, A.1    Rausch, R.L.2
  • 7
    • 0036221248 scopus 로고    scopus 로고
    • When does the incongruence length difference test fail?
    • Darlu P., Lecointre G. When does the incongruence length difference test fail?. Molecular Biology and Evolution 2002, 19:432-437.
    • (2002) Molecular Biology and Evolution , vol.19 , pp. 432-437
    • Darlu, P.1    Lecointre, G.2
  • 8
    • 0031968768 scopus 로고    scopus 로고
    • The phylogenetic placement of Taenia cestodes that parasitize humans
    • de Queiroz A., Alkire N.L. The phylogenetic placement of Taenia cestodes that parasitize humans. The Journal of Parasitology 1998, 84:379-383.
    • (1998) The Journal of Parasitology , vol.84 , pp. 379-383
    • de Queiroz, A.1    Alkire, N.L.2
  • 9
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond A.J., Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology 2007, 7:214.
    • (2007) BMC Evolutionary Biology , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 13
    • 3843143966 scopus 로고    scopus 로고
    • Molecular systematics of several cyclophyllid families (Cestoda) based on the analysis of 18S ribosomal DNA gene sequences
    • Foronda P., Casanova J.C., Vallanders B., Martinez E., Feliu C. Molecular systematics of several cyclophyllid families (Cestoda) based on the analysis of 18S ribosomal DNA gene sequences. Parasitology Research 2004, 93:279-282.
    • (2004) Parasitology Research , vol.93 , pp. 279-282
    • Foronda, P.1    Casanova, J.C.2    Vallanders, B.3    Martinez, E.4    Feliu, C.5
  • 14
    • 0013304709 scopus 로고
    • Life history studies on Taenia mustelae Gmelin, 1790 and the taxonomy of certain taenioid cestodes from Mustelidae
    • Freeman R.S. Life history studies on Taenia mustelae Gmelin, 1790 and the taxonomy of certain taenioid cestodes from Mustelidae. Canadian Journal of Zoology 1956, 34:219-242.
    • (1956) Canadian Journal of Zoology , vol.34 , pp. 219-242
    • Freeman, R.S.1
  • 15
    • 0028257559 scopus 로고
    • Phylogenetic information content of five nuclear gene sequences in animals: initial assessment of character sets from concordance and divergence studies
    • Friedlander T.P., Regier J.C., Mitter C. Phylogenetic information content of five nuclear gene sequences in animals: initial assessment of character sets from concordance and divergence studies. Systematic Biology 1994, 43:511-525.
    • (1994) Systematic Biology , vol.43 , pp. 511-525
    • Friedlander, T.P.1    Regier, J.C.2    Mitter, C.3
  • 16
    • 0033486285 scopus 로고    scopus 로고
    • NADH dehydrogenase subunit 1 and cytochrome c oxidase subunit I sequences compared for members of the genus Taenia (Cestoda)
    • Gasser R.B., Zhu X., McManus D.P. NADH dehydrogenase subunit 1 and cytochrome c oxidase subunit I sequences compared for members of the genus Taenia (Cestoda). International Journal for Parasitology 1999, 29:1965-1970.
    • (1999) International Journal for Parasitology , vol.29 , pp. 1965-1970
    • Gasser, R.B.1    Zhu, X.2    McManus, D.P.3
  • 18
    • 0020972416 scopus 로고
    • Gluconeogenesis and related aspects of glycolysis
    • Hers H.G., Hue L. Gluconeogenesis and related aspects of glycolysis. Annual Review of Biochemistry 1983, 52:617-653.
    • (1983) Annual Review of Biochemistry , vol.52 , pp. 617-653
    • Hers, H.G.1    Hue, L.2
  • 19
    • 31944451061 scopus 로고    scopus 로고
    • Phylogeny of Taenia: species definitions and origins of human parasites
    • Hoberg E.P. Phylogeny of Taenia: species definitions and origins of human parasites. Parasitology International 2006, 55(Suppl.):S23-S30.
    • (2006) Parasitology International , vol.55 , Issue.SUPPL.
    • Hoberg, E.P.1
  • 20
    • 0032989709 scopus 로고    scopus 로고
    • Phylogenetic analysis among the families of the Cyclophyllidea (Eucestoda) based on comparative morphology, with new hypotheses for co-evolution in vertebrates
    • Hoberg E.P., Jones A., Bray R.A. Phylogenetic analysis among the families of the Cyclophyllidea (Eucestoda) based on comparative morphology, with new hypotheses for co-evolution in vertebrates. Systematic Parasitology 1999, 42:51-73.
    • (1999) Systematic Parasitology , vol.42 , pp. 51-73
    • Hoberg, E.P.1    Jones, A.2    Bray, R.A.3
  • 25
    • 77954768343 scopus 로고    scopus 로고
    • Complete mitochondrial genomes of Taenia multiceps, T. hydatigena and T. pisiformis: additional molecular markers for a tapeworm genus of human and animal health significance
    • Jia W.Z., Yan H.B., Guo A.J., Zhu X.Q., Wang Y.C., Shi W.G., Chen H.T., Zhan F., Zhang S.H., Fu B.Q., Littlewood D.T., Cai X.P. Complete mitochondrial genomes of Taenia multiceps, T. hydatigena and T. pisiformis: additional molecular markers for a tapeworm genus of human and animal health significance. BMC Genomics 2010, 11:447.
    • (2010) BMC Genomics , vol.11 , pp. 447
    • Jia, W.Z.1    Yan, H.B.2    Guo, A.J.3    Zhu, X.Q.4    Wang, Y.C.5    Shi, W.G.6    Chen, H.T.7    Zhan, F.8    Zhang, S.H.9    Fu, B.Q.10    Littlewood, D.T.11    Cai, X.P.12
  • 27
    • 0344521289 scopus 로고
    • Order Cyclophyllidea van Beneden in Braun, 1900
    • CAB International, Wallingford, L.F. Khalil, A. Jones, R.A. Bray (Eds.)
    • Jones A., Bray R.A., Khalil L.F. Order Cyclophyllidea van Beneden in Braun, 1900. Key to the Cestode Parasites of Vertebrates 1994, 305-307. CAB International, Wallingford. L.F. Khalil, A. Jones, R.A. Bray (Eds.).
    • (1994) Key to the Cestode Parasites of Vertebrates , pp. 305-307
    • Jones, A.1    Bray, R.A.2    Khalil, L.F.3
  • 28
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 1980, 16:111-120.
    • (1980) Journal of Molecular Evolution , vol.16 , pp. 111-120
    • Kimura, M.1
  • 29
    • 0033370108 scopus 로고    scopus 로고
    • Eukaryotic transcriptional control
    • Kornberg R.D. Eukaryotic transcriptional control. Trends Cell Biology 1999, 9:M46-M49.
    • (1999) Trends Cell Biology , vol.9
    • Kornberg, R.D.1
  • 30
    • 33750314923 scopus 로고    scopus 로고
    • Molecular characterization of Echinococcus isolates of cervid origin from Finland and Sweden
    • Lavikainen A., Lehtinen M.J., Laaksonen S., Agren E., Oksanen A., Meri S. Molecular characterization of Echinococcus isolates of cervid origin from Finland and Sweden. Parasitology 2006, 133:565-570.
    • (2006) Parasitology , vol.133 , pp. 565-570
    • Lavikainen, A.1    Lehtinen, M.J.2    Laaksonen, S.3    Agren, E.4    Oksanen, A.5    Meri, S.6
  • 31
    • 54349121373 scopus 로고    scopus 로고
    • A phylogeny of members of the family Taeniidae based on the mitochondrial cox1 and nad1 gene data
    • Lavikainen A., Haukisalmi V., Lehtinen M.J., Henttonen H., Oksanen A., Meri S. A phylogeny of members of the family Taeniidae based on the mitochondrial cox1 and nad1 gene data. Parasitology 2008, 135:1457-1467.
    • (2008) Parasitology , vol.135 , pp. 1457-1467
    • Lavikainen, A.1    Haukisalmi, V.2    Lehtinen, M.J.3    Henttonen, H.4    Oksanen, A.5    Meri, S.6
  • 32
    • 0342531767 scopus 로고
    • The identification of Taenia tenuicollis Rudolphi, 1819, in North America
    • Locker B. The identification of Taenia tenuicollis Rudolphi, 1819, in North America. Journal of Parasitology 1955, 41:51-56.
    • (1955) Journal of Parasitology , vol.41 , pp. 51-56
    • Locker, B.1
  • 34
    • 0034122509 scopus 로고    scopus 로고
    • An up-date of Verster's (1969) 'Taxonomic revision of the genus Taenia Linnaeus' (Cestoda) in table format
    • Loos-Frank B. An up-date of Verster's (1969) 'Taxonomic revision of the genus Taenia Linnaeus' (Cestoda) in table format. Systematic Parasitology 2000, 45:155-183.
    • (2000) Systematic Parasitology , vol.45 , pp. 155-183
    • Loos-Frank, B.1
  • 35
    • 0026594346 scopus 로고
    • Interbreeding, monophyly and the genetic yardstick: species concepts in parasites
    • Lymbery A.J. Interbreeding, monophyly and the genetic yardstick: species concepts in parasites. Parasitology Today 1992, 8:208-211.
    • (1992) Parasitology Today , vol.8 , pp. 208-211
    • Lymbery, A.J.1
  • 37
    • 42449110273 scopus 로고    scopus 로고
    • First report of Echinococcus granulosus G8 in Eurasia and a reappraisal of the phylogenetic relationships of 'genotypes' G5-G10
    • Moks E., Jõgisalu I., Valdmann H., Saarma U. First report of Echinococcus granulosus G8 in Eurasia and a reappraisal of the phylogenetic relationships of 'genotypes' G5-G10. Parasitology 2008, 135:647-654.
    • (2008) Parasitology , vol.135 , pp. 647-654
    • Moks, E.1    Jõgisalu, I.2    Valdmann, H.3    Saarma, U.4
  • 38
    • 34249676876 scopus 로고    scopus 로고
    • A molecular phylogeny of the genus Echinococcus inferred from complete mitochondrial genomes
    • Nakao M., McManus D.P., Schantz P.M., Craig P.S., Ito A. A molecular phylogeny of the genus Echinococcus inferred from complete mitochondrial genomes. Parasitology 2007, 134:713-722.
    • (2007) Parasitology , vol.134 , pp. 713-722
    • Nakao, M.1    McManus, D.P.2    Schantz, P.M.3    Craig, P.S.4    Ito, A.5
  • 39
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei M., Gojobori T. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Molecular Biological Evolution 1986, 3:418-426.
    • (1986) Molecular Biological Evolution , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 40
    • 0034623005 scopus 로고    scopus 로고
    • T-Coffee: a novel method for fast and accurate multiple sequence alignment
    • Notredame C., Higgins D.G., Heringa J. T-Coffee: a novel method for fast and accurate multiple sequence alignment. Journal of Molecular Biology 2000, 302:205-217.
    • (2000) Journal of Molecular Biology , vol.302 , pp. 205-217
    • Notredame, C.1    Higgins, D.G.2    Heringa, J.3
  • 41
    • 0029039531 scopus 로고
    • Phylogenetic relationships within Taenia taeniaeformis variants and other taeniid cestodes inferred from the nucleotide sequence of the cytochrome c oxidase subunit I gene
    • Okamoto M., Bessho Y., Kamiya M., Kurosawa T., Horii T. Phylogenetic relationships within Taenia taeniaeformis variants and other taeniid cestodes inferred from the nucleotide sequence of the cytochrome c oxidase subunit I gene. Parasitology Research 1995, 81:451-458.
    • (1995) Parasitology Research , vol.81 , pp. 451-458
    • Okamoto, M.1    Bessho, Y.2    Kamiya, M.3    Kurosawa, T.4    Horii, T.5
  • 44
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: testing the model of DNA substitution
    • Posada D., Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics 1998, 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 45
    • 0022052047 scopus 로고
    • Presidential address: parasitology: retrospect and prospect
    • Rausch R.L. Presidential address: parasitology: retrospect and prospect. Journal of Parasitology 1985, 71:139-151.
    • (1985) Journal of Parasitology , vol.71 , pp. 139-151
    • Rausch, R.L.1
  • 46
    • 1542314457 scopus 로고    scopus 로고
    • Cystic echinococcosis in the Arctic and Sub-Arctic
    • Rausch R.L. Cystic echinococcosis in the Arctic and Sub-Arctic. Parasitology 2003, 127(Suppl.):S73-S85.
    • (2003) Parasitology , vol.127 , Issue.SUPPL.
    • Rausch, R.L.1
  • 47
    • 0015312877 scopus 로고
    • Echinococcus vogeli sp. n. (Cestoda: Taeniidae) from the bush dog, Speothos venaticus (Lund)
    • Rausch R.L., Berstein J.J. Echinococcus vogeli sp. n. (Cestoda: Taeniidae) from the bush dog, Speothos venaticus (Lund). Zeitschrift fuer tropenmedizin und parasitologie 1972, 23:25-34.
    • (1972) Zeitschrift fuer tropenmedizin und parasitologie , vol.23 , pp. 25-34
    • Rausch, R.L.1    Berstein, J.J.2
  • 50
    • 0015752830 scopus 로고
    • Echinococcus oligarthrus (Diesing, 1863) from Geoffroy's cat (Felis geoffroyi D'Orbigny y Gervais) in temperate South America
    • Schantz P.M., Colli C. Echinococcus oligarthrus (Diesing, 1863) from Geoffroy's cat (Felis geoffroyi D'Orbigny y Gervais) in temperate South America. Journal of Parasitology 1973, 59:1138-1140.
    • (1973) Journal of Parasitology , vol.59 , pp. 1138-1140
    • Schantz, P.M.1    Colli, C.2
  • 52
    • 0000614646 scopus 로고
    • Natural and experimental hosts of Echinococcus granulosus and E. multilocularis, with comments on the genetics of speciation in the genus Echinococcus
    • Smyth J.D., Smyth M.M. Natural and experimental hosts of Echinococcus granulosus and E. multilocularis, with comments on the genetics of speciation in the genus Echinococcus. Parasitology 1964, 54:493-514.
    • (1964) Parasitology , vol.54 , pp. 493-514
    • Smyth, J.D.1    Smyth, M.M.2
  • 53
    • 80055110805 scopus 로고    scopus 로고
    • PAUP*: phylogenetic analysis using parsimony (and other methods) 4.0 beta. Sinauer Associates, Massachusetts.
    • Swofford, D.L., 2002. PAUP*: phylogenetic analysis using parsimony (and other methods) 4.0 beta. Sinauer Associates, Massachusetts.
    • (2002)
    • Swofford, D.L.1
  • 54
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biological Evolution
    • Tamura, K., Dudley, J., Nei, M., Kumar, S., 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biological Evolution 24, 1596-1599.
    • (2007) , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 55
    • 46749143238 scopus 로고    scopus 로고
    • The taxonomy, phylogeny and transmission of Echinococcus
    • Thompson R.C.A. The taxonomy, phylogeny and transmission of Echinococcus. Experimental Parasitology 2008, 119:439-446.
    • (2008) Experimental Parasitology , vol.119 , pp. 439-446
    • Thompson, R.C.A.1
  • 56
    • 0036791935 scopus 로고    scopus 로고
    • Towards a taxonomic revision of the genus Echinococcus
    • Thompson R.C.A., McManus D.P. Towards a taxonomic revision of the genus Echinococcus. Trends in Parasitology 2002, 18:452-457.
    • (2002) Trends in Parasitology , vol.18 , pp. 452-457
    • Thompson, R.C.A.1    McManus, D.P.2
  • 59
    • 0014523974 scopus 로고
    • A taxonomic revision of the genus Taenia Linnaeus, 1758 s. str
    • Verster A. A taxonomic revision of the genus Taenia Linnaeus, 1758 s. str. Onderstepoort Journal of Veterinary Research 1969, 36:3-58.
    • (1969) Onderstepoort Journal of Veterinary Research , vol.36 , pp. 3-58
    • Verster, A.1
  • 60
    • 0032902374 scopus 로고    scopus 로고
    • Contributions to the phylogeny of the Cyclophyllidea (Cestoda) inferred from mitochondrial 12S rDNA
    • von Nickisch-Rosenegk M., Lucius R., Loos-Frank B. Contributions to the phylogeny of the Cyclophyllidea (Cestoda) inferred from mitochondrial 12S rDNA. Journal of Molecular Evolution 1999, 48:586-596.
    • (1999) Journal of Molecular Evolution , vol.48 , pp. 586-596
    • von Nickisch-Rosenegk, M.1    Lucius, R.2    Loos-Frank, B.3
  • 61
    • 0032849307 scopus 로고    scopus 로고
    • Modification of universal 12S rDNA primers for specific amplification of contaminated Taenia spp. (Cestoda) gDNA enabling phylogenetic studies
    • von Nickisch-Rosenegk M., Silva-Gonzalez R., Lucius R. Modification of universal 12S rDNA primers for specific amplification of contaminated Taenia spp. (Cestoda) gDNA enabling phylogenetic studies. Parasitology Research 1999, 85:819-825.
    • (1999) Parasitology Research , vol.85 , pp. 819-825
    • von Nickisch-Rosenegk, M.1    Silva-Gonzalez, R.2    Lucius, R.3
  • 64
    • 34547910647 scopus 로고    scopus 로고
    • Characterization of Taenia madoquae and Taenia regis from carnivores in Kenya using genetic markers in nuclear and mitochondrial DNA, and their relationships with other selected taeniids
    • Zhang L., Hu M., Jones A., Allsopp B.A., Beveridge I., Schindler A.R., Gasser R.B. Characterization of Taenia madoquae and Taenia regis from carnivores in Kenya using genetic markers in nuclear and mitochondrial DNA, and their relationships with other selected taeniids. Molecular and Cellular Probes 2007, 21:379-385.
    • (2007) Molecular and Cellular Probes , vol.21 , pp. 379-385
    • Zhang, L.1    Hu, M.2    Jones, A.3    Allsopp, B.A.4    Beveridge, I.5    Schindler, A.R.6    Gasser, R.B.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.