-
1
-
-
33646187199
-
Concordance of multiple analytical approaches demonstrates a complex relationship between DNA repair gene SNPs, smoking and bladder cancer susceptibility
-
Andrew AS, Nelson HH, Kelsey KT, Moore JH, Meng AC, Casella DP, Tosteson TD, Schned AR, Karagas MR. 2006. Concordance of multiple analytical approaches demonstrates a complex relationship between DNA repair gene SNPs, smoking and bladder cancer susceptibility. Carcinogenesis 27:1030-1037.
-
(2006)
Carcinogenesis
, vol.27
, pp. 1030-1037
-
-
Andrew, A.S.1
Nelson, H.H.2
Kelsey, K.T.3
Moore, J.H.4
Meng, A.C.5
Casella, D.P.6
Tosteson, T.D.7
Schned, A.R.8
Karagas, M.R.9
-
2
-
-
0036706093
-
William Bateson: a biologist ahead of his time
-
Bateson B. 2002. William Bateson: a biologist ahead of his time. Am J Hum Genet 81:49-58.
-
(2002)
Am J Hum Genet
, vol.81
, pp. 49-58
-
-
Bateson, B.1
-
4
-
-
35348897831
-
Information-theoretic metrics for visualizing gene environment interactions
-
Chanda P, Zhang A, Brazeau D, Sucheston L, Freudenheim JL, Ambrosone C, Ramanathan M. 2007. Information-theoretic metrics for visualizing gene environment interactions. Am J Hum Genet 81:939-863.
-
(2007)
Am J Hum Genet
, vol.81
, pp. 939-863
-
-
Chanda, P.1
Zhang, A.2
Brazeau, D.3
Sucheston, L.4
Freudenheim, J.L.5
Ambrosone, C.6
Ramanathan, M.7
-
6
-
-
38349134867
-
Exploration of gene-gene interaction effects using entropy-based methods
-
Dong C, Chu X, Wang Y, Wang Y, Jin L, Shi T, Huang W, Li Y. 2008. Exploration of gene-gene interaction effects using entropy-based methods. Eur J Hum Genet 16:229-235.
-
(2008)
Eur J Hum Genet
, vol.16
, pp. 229-235
-
-
Dong, C.1
Chu, X.2
Wang, Y.3
Wang, Y.4
Jin, L.5
Shi, T.6
Huang, W.7
Li, Y.8
-
7
-
-
84971185409
-
The correlations between relatives on the supposition of Mendelian inheritance
-
Fisher RA. 1918. The correlations between relatives on the supposition of Mendelian inheritance. Trans R Soc Edinb 52:399-433.
-
(1918)
Trans R Soc Edinb
, vol.52
, pp. 399-433
-
-
Fisher, R.A.1
-
8
-
-
0030333453
-
Who's afraid of epistasis
-
Frankel WN, Schork NJ. 1996. Who's afraid of epistasis. Nat Genet 14:371-373.
-
(1996)
Nat Genet
, vol.14
, pp. 371-373
-
-
Frankel, W.N.1
Schork, N.J.2
-
9
-
-
0037433052
-
Multifactor dimensionality reduction software for detecting gene-gene and gene-environment interactions
-
Hahn LW, Ritchie MD, Moore JH. 2003. Multifactor dimensionality reduction software for detecting gene-gene and gene-environment interactions. Bioinformatics 19:376-382.
-
(2003)
Bioinformatics
, vol.19
, pp. 376-382
-
-
Hahn, L.W.1
Ritchie, M.D.2
Moore, J.H.3
-
10
-
-
0019042755
-
Multiple mutual informations and multiple interactions in frequency data
-
Han TS. 1980. Multiple mutual informations and multiple interactions in frequency data. Inf Control 46:26-45.
-
(1980)
Inf Control
, vol.46
, pp. 26-45
-
-
Han, T.S.1
-
11
-
-
80054767884
-
-
Machine learning based on attribute interactions. PhD thesis.
-
Jakulin A. 2005. Machine learning based on attribute interactions. PhD thesis.
-
(2005)
-
-
Jakulin, A.1
-
14
-
-
0242370859
-
Attribute interactions in medical data analysis
-
Jakulin A, Bratko I, Smrke D, Demsar J, Zupan B. 2003. Attribute interactions in medical data analysis. Lect Notes Artif Intell 2780:229-238.
-
(2003)
Lect Notes Artif Intell
, vol.2780
, pp. 229-238
-
-
Jakulin, A.1
Bratko, I.2
Smrke, D.3
Demsar, J.4
Zupan, B.5
-
15
-
-
37349001288
-
An entropy-based approach for testing genetic epistasis underlying complex diseases
-
Kang G, Yue W, Zhang J, Cui Y, Zuo Y, Zhang D. 2008. An entropy-based approach for testing genetic epistasis underlying complex diseases. J Theor Biol 250:362-374.
-
(2008)
J Theor Biol
, vol.250
, pp. 362-374
-
-
Kang, G.1
Yue, W.2
Zhang, J.3
Cui, Y.4
Zuo, Y.5
Zhang, D.6
-
17
-
-
34250821108
-
A generalized combinatorial approach for detecting gene-by-gene and gene-by-environment interactions with application to nicotine dependence
-
Lou XY, Chen GB, Yan L, Ma JZ, Zhu J, Elston RC, Li MD. 2007. A generalized combinatorial approach for detecting gene-by-gene and gene-by-environment interactions with application to nicotine dependence. Am J Hum Genet 80:1125-1137.
-
(2007)
Am J Hum Genet
, vol.80
, pp. 1125-1137
-
-
Lou, X.Y.1
Chen, G.B.2
Yan, L.3
Ma, J.Z.4
Zhu, J.5
Elston, R.C.6
Li, M.D.7
-
18
-
-
53049102597
-
A combinatorial approach to detecting gene-gene and gene-environment interactions in family studies
-
Lou XY, Chen GB, Yan L, Ma JZ, Mangold1 JE, Zhu J, Elston RC, Li MD. 2008. A combinatorial approach to detecting gene-gene and gene-environment interactions in family studies. Am J Hum Genet 83:457-467.
-
(2008)
Am J Hum Genet
, vol.83
, pp. 457-467
-
-
Lou, X.Y.1
Chen, G.B.2
Yan, L.3
Ma, J.Z.4
Mangold1, J.E.5
Zhu, J.6
Elston, R.C.7
Li, M.D.8
-
19
-
-
70649108632
-
Specific interaction between genotype, smoking and autoimmunity to citrullinated α-enolase in the etiology of rheumatoid arthritis
-
Mahdi H, Fisher BA, Källberg H, Plant D, Malmström V, Rönnelid J, Charles P, Ding B, Alfredsson L, Padyukov L, Symmons DPM, Venables PJ, Klareskog L, Lundberg K. 2009. Specific interaction between genotype, smoking and autoimmunity to citrullinated α-enolase in the etiology of rheumatoid arthritis. Nat Genet 41:1319-1324.
-
(2009)
Nat Genet
, vol.41
, pp. 1319-1324
-
-
Mahdi, H.1
Fisher, B.A.2
Källberg, H.3
Plant, D.4
Malmström, V.5
Rönnelid, J.6
Charles, P.7
Ding, B.8
Alfredsson, L.9
Padyukov, L.10
Symmons, D.P.M.11
Venables, P.J.12
Klareskog, L.13
Lundberg, K.14
-
20
-
-
32044462757
-
A novel method to identify gene-gene effects in nuclear families: the MDR-PDT
-
Martin ER, Ritchie MD, Hahn L, Kang S, Moore JH. 2006. A novel method to identify gene-gene effects in nuclear families: the MDR-PDT. Genet Epidemiol 30:111-123.
-
(2006)
Genet Epidemiol
, vol.30
, pp. 111-123
-
-
Martin, E.R.1
Ritchie, M.D.2
Hahn, L.3
Kang, S.4
Moore, J.H.5
-
21
-
-
0002801737
-
Multivariate information transmission
-
McGill WJ. 1954. Multivariate information transmission. Psychometrika 19:97-116.
-
(1954)
Psychometrika
, vol.19
, pp. 97-116
-
-
McGill, W.J.1
-
22
-
-
69449103972
-
Epistasis and its implications for personal genetics
-
Moore JH, Williams SM. 2009. Epistasis and its implications for personal genetics. Am J Hum Genet 85:309-320.
-
(2009)
Am J Hum Genet
, vol.85
, pp. 309-320
-
-
Moore, J.H.1
Williams, S.M.2
-
23
-
-
0002612450
-
Applications of genetic algorithms to the discovery of complex models for simulation studies in human genetics
-
Langdon WB, Cantu-Paz E, Mathias K, Roy R, Davis D, Poli R, Balakrishnan K, Honavar V, Rudolph G, Wegener J, Bull L, Potter MA, Schultz AC, Miller JF, Burke E, Jonoska N, editors. San Francisco: Morgan Kaufmann
-
Moore JH, Hahn LW, Ritchie MD, Thornton TA, White BC. 2002. Applications of genetic algorithms to the discovery of complex models for simulation studies in human genetics. In: Langdon WB, Cantu-Paz E, Mathias K, Roy R, Davis D, Poli R, Balakrishnan K, Honavar V, Rudolph G, Wegener J, Bull L, Potter MA, Schultz AC, Miller JF, Burke E, Jonoska N, editors. Proceedings of the Genetic and Evolutionary Computation Conference. San Francisco: Morgan Kaufmann, p 1150-1155.
-
(2002)
Proceedings of the Genetic and Evolutionary Computation Conference
, pp. 1150-1155
-
-
Moore, J.H.1
Hahn, L.W.2
Ritchie, M.D.3
Thornton, T.A.4
White, B.C.5
-
24
-
-
33745599582
-
A flexible computational framework for detecting, characterizing, and interpreting statistical patterns of epistasis in genetic studies of human disease susceptibility
-
Moore JH, Gilbert JC, Tsai CT, Chiang FT, Holden T, Barney N, White BC. 2006 A flexible computational framework for detecting, characterizing, and interpreting statistical patterns of epistasis in genetic studies of human disease susceptibility. J Theor Biol 241:252-261.
-
(2006)
J Theor Biol
, vol.241
, pp. 252-261
-
-
Moore, J.H.1
Gilbert, J.C.2
Tsai, C.T.3
Chiang, F.T.4
Holden, T.5
Barney, N.6
White, B.C.7
-
25
-
-
0038315436
-
Entropy as a measure for linkage disequilibrium over multilocus haplotype blocks
-
Nothnagel M, Furst R, Rohde K. 2002. Entropy as a measure for linkage disequilibrium over multilocus haplotype blocks. Hum Hered 54:186-198.
-
(2002)
Hum Hered
, vol.54
, pp. 186-198
-
-
Nothnagel, M.1
Furst, R.2
Rohde, K.3
-
26
-
-
0034973569
-
Multifactor dimensionality reduction reveals high-order interactions among estrogen metabolism genes in sporadic breast cancer
-
Ritchie MD, Hahn LW, Roodi N, Bailey LR, Dupont WD, Parl FF, Moore JH. 2001. Multifactor dimensionality reduction reveals high-order interactions among estrogen metabolism genes in sporadic breast cancer. Am J Hum Genet 69:138-147.
-
(2001)
Am J Hum Genet
, vol.69
, pp. 138-147
-
-
Ritchie, M.D.1
Hahn, L.W.2
Roodi, N.3
Bailey, L.R.4
Dupont, W.D.5
Parl, F.F.6
Moore, J.H.7
-
27
-
-
0037310257
-
Power of multifactor dimensionality reduction for detecting gene-gene interactions in the presence of genotyping error, phenocopy, and genetic heterogeneity
-
Ritchie MD, Hahn LW, Moore JH. 2003a. Power of multifactor dimensionality reduction for detecting gene-gene interactions in the presence of genotyping error, phenocopy, and genetic heterogeneity. Genet Epidemiol 24:150-157.
-
(2003)
Genet Epidemiol
, vol.24
, pp. 150-157
-
-
Ritchie, M.D.1
Hahn, L.W.2
Moore, J.H.3
-
28
-
-
0642368712
-
Optimization of neural network architecture using genetic programming improves the detection and modeling of gene-gene interactions in studies of human diseases
-
Ritchie MD, White BC, Parker JS, Hahn LW, Moore JH. 2003b. Optimization of neural network architecture using genetic programming improves the detection and modeling of gene-gene interactions in studies of human diseases. BMC Bioinform 4:28.
-
(2003)
BMC Bioinform
, vol.4
, pp. 28
-
-
Ritchie, M.D.1
White, B.C.2
Parker, J.S.3
Hahn, L.W.4
Moore, J.H.5
-
29
-
-
35048891558
-
Genetic programming neural networks as a bioinformatics tool in human genetics
-
Ritchie MD, Coffey CS, Moore JH. 2004 Genetic programming neural networks as a bioinformatics tool in human genetics. Lect Notes Comput Sci 3102:438-448.
-
(2004)
Lect Notes Comput Sci
, vol.3102
, pp. 438-448
-
-
Ritchie, M.D.1
Coffey, C.S.2
Moore, J.H.3
-
30
-
-
84856043672
-
A mathematical theory of communications
-
623-656.
-
Shannon CE. 1948. A mathematical theory of communications. Bell Syst Techn J XXVII:379-423, 623-656.
-
(1948)
Bell Syst Techn J
, vol.27
, pp. 379-423
-
-
Shannon, C.E.1
-
31
-
-
77957588055
-
Gene-environment interaction influences the reactivity of autoantibodies to citrullinated antigens in rheumatoid arthritis
-
van der Woude D, Alemayehu WD, Verduijn W, de Vries RRP, Houwing-Duistermaat JJ, Huizinga TWJ, Toes REM. 2010. Gene-environment interaction influences the reactivity of autoantibodies to citrullinated antigens in rheumatoid arthritis. Nat Genet 42:814-816.
-
(2010)
Nat Genet
, vol.42
, pp. 814-816
-
-
van der Woude, D.1
Alemayehu, W.D.2
Verduijn, W.3
de Vries, R.R.P.4
Houwing-Duistermaat, J.J.5
Huizinga, T.W.J.6
Toes, R.E.M.7
-
32
-
-
34247338434
-
A balanced accuracy metric for epistasis modeling in imbalanced datasets using multifactor dimensionality reduction
-
Velez DR, White BC, Motsinger AA, Bush WS, Ritchie MD, Williams SM, Moore JH. 2007. A balanced accuracy metric for epistasis modeling in imbalanced datasets using multifactor dimensionality reduction. Genet Epidemiol 31:306-315.
-
(2007)
Genet Epidemiol
, vol.31
, pp. 306-315
-
-
Velez, D.R.1
White, B.C.2
Motsinger, A.A.3
Bush, W.S.4
Ritchie, M.D.5
Williams, S.M.6
Moore, J.H.7
-
33
-
-
77956395423
-
BOOST: a fast approach to detecting gene-gene interactions in genome-wide case-control studies
-
Wan X, Yang C, Yang Q, Xue H, Fan X, Tang NLS, Yu Y. 2010. BOOST: a fast approach to detecting gene-gene interactions in genome-wide case-control studies. Am J Hum Genet 87:325-340.
-
(2010)
Am J Hum Genet
, vol.87
, pp. 325-340
-
-
Wan, X.1
Yang, C.2
Yang, Q.3
Xue, H.4
Fan, X.5
Tang, N.L.S.6
Yu, Y.7
-
34
-
-
0345997703
-
Information theoretical analysis of multivariate correlation
-
Watanabe S. 1960. Information theoretical analysis of multivariate correlation. IBM J Res Dev 4:66-82.
-
(1960)
IBM J Res Dev
, vol.4
, pp. 66-82
-
-
Watanabe, S.1
-
35
-
-
84887212481
-
Mutual information for testing gene-environmental interaction
-
Wu X, Jin L, Xiong MM. 2009. Mutual information for testing gene-environmental interaction. PLos One e4578.
-
(2009)
PLos One
-
-
Wu, X.1
Jin, L.2
Xiong, M.M.3
-
36
-
-
0026155039
-
A new outlook on Shannon's information measures
-
Yeung RW. 1991. A new outlook on Shannon's information measures. IEEE Trans Inf Theory 37:466-474.
-
(1991)
IEEE Trans Inf Theory
, vol.37
, pp. 466-474
-
-
Yeung, R.W.1
-
37
-
-
34548352849
-
Bayesian inference of epistatic interactions in case-control studies
-
Zhang Y, Liu JS. 2007 Bayesian inference of epistatic interactions in case-control studies. Nat Genet 39:1167-1173.
-
(2007)
Nat Genet
, vol.39
, pp. 1167-1173
-
-
Zhang, Y.1
Liu, J.S.2
|