Network Models in Anatomical Systems

Journal of Anthropological Sciences

Volumn 89, Issue , 2011, Pages 175-184

  Esteve Altava, Borja ^a   Marugán Lobón, Jesús ^b   Botella, Héctor ^c   Rasskin Gutman, Diego ^a  

^a UNIVERSITY OF VALENCIA   (Spain)

^b UNIVERSIDAD AUTÓNOMA DE MADRID   (Spain)

^c UNIVERSITY OF VALENCIA   (Spain)

Author keywords

Integration; Modeling; Modularity; Network Theory

Indexed keywords

ANIMAL; ARTICLE; BIOLOGICAL MODEL; COMPARATIVE ANATOMY; HUMAN; PHYSICAL ANTHROPOLOGY; SYSTEMS THEORY;

ANATOMY, COMPARATIVE; ANIMALS; ANTHROPOLOGY, PHYSICAL; HUMANS; MODELS, BIOLOGICAL; SYSTEMS THEORY;

EID: 80053984239     PISSN: 18274765     EISSN: None     Source Type: Journal    
DOI: 10.4436/jass.89016     Document Type: Article

References (39)

1. Albert R., Jeong H. & Barabási A.L. 2000. Error and attack tolerance of complex networks. Nature, 406: 378-381.
2. Barabási A.L. & Albert R. 1999. Emergence of scaling in random networks. Science, 286: 509-510.
3. Callebaut W. & Rasskin-Gutman D. 2005. Modularity. Understanding the development and evolution of natural complex systems. MIT Press, Cambridge.
4. Bastir M. 2008. A systems-model for the morphological analysis of integration and modularity in human craniofacial evolution. J. Anthropol. Sci., 86: 37-58.
5. Berry A.C. & Berry R.J. 1967. Epigenetic variation in the human cranium. J. Anat., 10: 361-379.
6. Danon L., Diaz-Guilera A., Duch J. & Arenas A. 2005. Comparing community structure identification. JSTAT, 9: P09008-09008.
7. Dorogovtsev S.N. & Mendes J.F.F. 2003. Evolution of Networks: from biological networks to the internet and WWW. Oxford University Press, New York.
8. Dunne J.A., Williams R.J. & Martinez N.D. 2002. Food-web structure and network theory: The role of connectance and size. Proc. Natl. Acad. Sci. U.S.A., 99: 12917-12922.
9. Dunne J.A., Williams R.J., Martinez N.D., Wood R.A. & Erwin D.H. 2008. Compilation and network analyses of Cambrian food webs. PLoS Biol., 6: e102.
10. Franke L., van Bakel H., Fokkens L., de Jong E.D. & Egmont-Petersen M. 2006. Reconstruction of a functional human gene network, with an application for prioritizing positional candidate genes. Am. J. Hum. Genet., 78: 1011-1025.
11. Fortunato S. 2010. Community detection in graphs. Phys. Rep., 486: 75-174.
12. Hagmann P., Cammoun L., Gigandet X., Meuli R., Honey C.J., Wedeen V.J. & Sporns O. 2008. Mapping the structural core of human cerebral cortex. PLoS Biol., 6: e159.
13. Jeong H., Tombor B., Albert R., Oltvai Z.N. & Barabási A.L. 2000. The large-scale organization of metabolic networks. Nature, 407: 651-654.
14. Képés F. 2007. Biological networks. Complex systems and interdisciplinary science. Vol. 3. World Scientific Publishing, Singapore.
15. Klingenberg C.P. 2004. Integration, modules and development: molecules to morphology to evolution. In M. Pigliucci & K. Preston (eds): Phenotypic integration: studying the ecology and evolution of complex phenotypes, 1st edition, pp. 213-230. Oxford University Press, New York.
16. Klingenberg C.P. 2008. Morphological integration and developmental modularity. Ann. Rev. Ecol. Evol. S., 39: 115-132.
17. Klingenberg C.P. 2010. Evolution and development of shape: integrating quantitative approaches. Nat. Rev. Genet., 11: 623-635.
18. Klovdahl A.S. 1985. Social networks and the spread of infectious diseases: the AIDS example. Soc. Sci. Med., 21: 1203-1216.
19. Manson O. & Verwoerd M. 2007. Graph theory and networks in Biology. IET Syst. Biol., 1: 89-119.
20. Milgram S. 1967. The small world problem. Psychol. Today, 2: 60-67.
21. Milo R., Shen-Orr S., Itzkovitz S., Kashtan N., Chklovskii D. & Alon U. 2002. Network motifs: Simple building blocks of complex networks. Science, 298: 824-827.
22. Newman M.E.J. 2003. The structure and function of complex networks. SIAM Review, 45: 167-256.
23. Porter M.A., Onnella J.P. & Mucha P.J. 2009. Communities in Networks. Not. Am. Math. Soc., 56: 1082-1097.
24. Rashevsky N. 1954. Topology and life. B. Math. Biophys., 16: 317-348.
25. Rasskin-Gutman D. 2003. Boundary constraints for the emergence of form. In G. Müller & S. Newman (eds): Origination of Organismal Form, 1st edition, pp. 305-322. MIT Press, Cambridge.
26. Rasskin-Gutman D. & Buscalioni A.D. 2001. Theoretical morphology of the Archosaur (Reptilia: Diapsida) pelvic girdle. Paleobiology, 27: 59-78.
27. Rasskin-Gutman D. & Esteve-Altava B. 2009. Modeling Evo-Devo: Broken Hierarchies and Multiple Scales of Organization and Complexity. In R.M. Sinclair & K.M. Stiefel (eds): Multiscale Phenomena in Biology: Proceedings of the 2nd Okinawa Conference on Mathematics and Biology. AIP Conference Proceedings, 1167: 43-56.
28. Riedl R. 1978. Order in living organisms: A systems analysis of evolution. Wiley Liss Inc., New York.
29. Salazar-Ciudad I. & Jernvall J. 2002. A gene network model accounting for development and evolution of mammalian teeth. Proc. Natl. Acad. Sci. U.S.A., 99: 8116-8120.
30. Schlosser G. & Wagner G.P. 2004. Modularity in development and evolution. University of Chicago Press, Chicago.
31. Sporns O., Chialvo D.R., Kaiser M. & Hilgetag C.C. 2004. Organization, development and function of complex brain networks. Trends Cogn. Sci., 8: 418-425.
32. Tyler A.L., Asselbergs F.W., Williams S.M. & Moore J.H. 2009. Shadows of complexity: what biological networks reveal about epistasis and pleiotropy. BioEssays, 31: 220-227.
33. Wagner G.P., Pavlicev M. & Cheverud J.M. 2007. The road to modularity. Nat. Rev. Genet., 8: 921-931.
34. Wang Q., Opperman L.A., Havill L.M., Carlson D.S. & Dechow P.C. 2006. Inheritance of sutural pattern at the pterion in Rhesus monkey skulls. Anat. Rec. A. Discov. Mol. Cell. Evol. Biol., 288: 1042-1049.
35. Wasserman S. & Faust K. 1994. Social networks analysis. Cambridge University Press, Cambridge.
36. Watts D.J. & Strogatz S.H. 1998. Collective dynamics of 'small-world' networks. Nature, 393: 440-442.
37. Woodger J.H. 1945. On biological transformations. In W.E. Le Gros & P.B. Medawar (eds): Essays on Growth and Form presented to D'A. W. Thompson, 1st edition, pp 95-120. Oxford University Press, New York.
38. Wutchty S., Ravasz E. & Barabási A.L. 2006. The architecture of biological networks. In T.S. Deisboeck & J.T. Kresh (eds): Complex Systems Science in Biomedicine, 1st edition, pp. 165-181. Springer, Berlin.
39. Zhang L.V., King O. D, Wong S. L, Goldberg D.S., Tong A.H. Y, Lesage G., Andrews B., Bussey H., Boone C. & Roth F.P. 2005. Motifs, themes and thematic maps of an integrated Saccharomyces cerevisiae interaction network. J. Biol., 4: 6.