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Volumn 61, Issue 10, 2011, Pages 2373-2378

Chitinophaga eiseniae sp. nov., isolated from vermicompost

Author keywords

[No Author keywords available]

Indexed keywords

CYTOSINE; DNA; FATTY ACID; GUANINE; MENAQUINONE; PHOSPHATIDYLETHANOLAMINE; POLYAMINE;

EID: 80053904204     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.023028-0     Document Type: Article
Times cited : (35)

References (33)
  • 1
    • 0036241785 scopus 로고    scopus 로고
    • How earthworm density affects microbial biomass and activity in pig manure
    • Aria, M., Monroy, F., Dominguez, J. & Mato, S. (2002). How earthworm density affects microbial biomass and activity in pig manure. Eur J Soil Biol 38, 7-10.
    • (2002) Eur J Soil Biol , vol.38 , pp. 7-10
    • Aria, M.1    Monroy, F.2    Dominguez, J.3    Mato, S.4
  • 2
    • 66149136915 scopus 로고    scopus 로고
    • Lysobacter oryzae sp. nov., isolated from the rhizosphere of rice (Oryza sativa L.)
    • Aslam, Z., Yasir, M., Jeon, C. O. & Chung, Y. R. (2009). Lysobacter oryzae sp. nov., isolated from the rhizosphere of rice (Oryza sativa L.). Int J Syst Evol Microbiol 59, 675-680.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 675-680
    • Aslam, Z.1    Yasir, M.2    Jeon, C.O.3    Chung, Y.R.4
  • 5
    • 0035989637 scopus 로고    scopus 로고
    • Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family
    • Subcommittee on the taxonomy of Flavobacterium and Cytophaga-like bacteria of the International Committee on Systematics of Prokaryotes
    • Bernardet, J.-F., Nakagawa, Y., Holmes, B. & Subcommittee on the taxonomy of Flavobacterium and Cytophaga-like bacteria of the International Committee on Systematics of Prokaryotes (2002). Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int J Syst Evol Microbiol 52, 1049-1070.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1049-1070
    • Bernardet, J.-F.1    Nakagawa, Y.2    Holmes, B.3
  • 7
    • 84887070146 scopus 로고
    • Polyamine pattern as a chemotaxonomic marker within the Proteobacteria
    • Busse, H. J. & Auling, G. (1988). Polyamine pattern as a chemotaxonomic marker within the Proteobacteria. Syst Appl Microbiol 11, 1-8.
    • (1988) Syst Appl Microbiol , vol.11 , pp. 1-8
    • Busse, H.J.1    Auling, G.2
  • 8
    • 0030807960 scopus 로고    scopus 로고
    • Discrimination of members of the family Pasteurellaceae based on polyamine patterns
    • Busse, H. J., Bunka, S., Hensel, A. & Lubitz, W. (1997). Discrimination of members of the family Pasteurellaceae based on polyamine patterns. Int J Syst Bacteriol 47, 698-708.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 698-708
    • Busse, H.J.1    Bunka, S.2    Hensel, A.3    Lubitz, W.4
  • 10
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • Chun, J., Lee, J. H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2259-2261
    • Chun, J.1    Lee, J.H.2    Jung, Y.3    Kim, M.4    Kim, S.5    Kim, B.K.6    Lim, Y.W.7
  • 11
    • 0002659669 scopus 로고
    • Biophysical factors in growth
    • Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. B. Phillips. Washington, DC: American Society for Microbiology
    • Costilow, R. N. (1981). Biophysical factors in growth. In Manual of Methods for General Bacteriology, pp. 66-78. Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. B. Phillips. Washington, DC: American Society for Microbiology.
    • (1981) Manual of Methods for General Bacteriology , pp. 66-78
    • Costilow, R.N.1
  • 12
    • 78651157652 scopus 로고
    • A simple, specific spray for the detection of phospholipids on thin-layer chromatograms
    • Dittmer, J. C. & Lester, R. L. (1964). A simple, specific spray for the detection of phospholipids on thin-layer chromatograms. J Lipid Res 15, 126-127.
    • (1964) J Lipid Res , vol.15 , pp. 126-127
    • Dittmer, J.C.1    Lester, R.L.2
  • 13
    • 0018828401 scopus 로고
    • A simple test for flexirubin-type pigments
    • Fautz, E. & Reichenbach, H. (1980). A simple test for flexirubin-type pigments. FEMS Microbiol Lett 8, 87-91.
    • (1980) FEMS Microbiol Lett , vol.8 , pp. 87-91
    • Fautz, E.1    Reichenbach, H.2
  • 14
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 15
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
    • (1999) Nucleic Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 16
    • 0029042150 scopus 로고
    • A new solid medium for enumerating cellulose-utilizing bacteria in soil
    • Hendricks, C. W., Doyle, J. D. & Hugley, B. (1995). A new solid medium for enumerating cellulose-utilizing bacteria in soil. Appl Environ Microbiol 61, 2016-2019.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 2016-2019
    • Hendricks, C.W.1    Doyle, J.D.2    Hugley, B.3
  • 17
    • 0001220414 scopus 로고
    • Separation of carbohydrates on borate impregnated silica gel G plates
    • Jacin, H. & Mishkin, A. R. (1965). Separation of carbohydrates on borate impregnated silica gel G plates. J Chromatogr A 18, 170-173.
    • (1965) J Chromatogr A , vol.18 , pp. 170-173
    • Jacin, H.1    Mishkin, A.R.2
  • 18
    • 0036250036 scopus 로고    scopus 로고
    • Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia
    • Janssen, P. H., Yates, P. S., Grinton, B. E., Taylor, P. M. & Sait, M. (2002). Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia. Appl Environ Microbiol 68, 2391-2396.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 2391-2396
    • Janssen, P.H.1    Yates, P.S.2    Grinton, B.E.3    Taylor, P.M.4    Sait, M.5
  • 19
    • 33749014411 scopus 로고    scopus 로고
    • Transfer of [Flexibacter] sancti, [Flexibacter] filiformis, [Flexibacter] japonensis and [Cytophaga] arvensicola to the genus Chitinophaga and description of Chitinophaga skermanii sp. nov
    • Kämpfer, P., Young, C. C., Sridhar, K. R., Arun, A. B., Lai, W. A., Shen, F. T. & Rekha, P. D. (2006). Transfer of [Flexibacter] sancti, [Flexibacter] filiformis, [Flexibacter] japonensis and [Cytophaga] arvensicola to the genus Chitinophaga and description of Chitinophaga skermanii sp. nov. Int J Syst Evol Microbiol 56, 2223-2228.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 2223-2228
    • Kämpfer, P.1    Young, C.C.2    Sridhar, K.R.3    Arun, A.B.4    Lai, W.A.5    Shen, F.T.6    Rekha, P.D.7
  • 20
    • 79952411086 scopus 로고    scopus 로고
    • Hydrotalea flava gen. nov., sp. nov., a new species of the phylum Bacteriodetes and allocation of the genera Chitinophaga, Sediminibacterium, Lacibacter, Flavihumibacter, Flavisolibacter, Niabella, Niastella, Segetibacter, Parasegetibacter, Terrimonas, Ferruginibacter, Filimonas and Hydrotalea to the family Chitinophagaceae fam. nov
    • Kämpfer, P., Lodders, N. & Falsen, E. (2011). Hydrotalea flava gen. nov., sp. nov., a new species of the phylum Bacteriodetes and allocation of the genera Chitinophaga, Sediminibacterium, Lacibacter, Flavihumibacter, Flavisolibacter, Niabella, Niastella, Segetibacter, Parasegetibacter, Terrimonas, Ferruginibacter, Filimonas and Hydrotalea to the family Chitinophagaceae fam. nov. Int J Syst Evol Microbiol 61, 518-523.
    • (2011) Int J Syst Evol Microbiol , vol.61 , pp. 518-523
    • Kämpfer, P.1    Lodders, N.2    Falsen, E.3
  • 21
    • 34548148493 scopus 로고    scopus 로고
    • Chitinophaga terrae sp. nov., isolated from soil
    • Kim, M. K. & Jung, H. Y. (2007). Chitinophaga terrae sp. nov., isolated from soil. Int J Syst Evol Microbiol 57, 1721-1724.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1721-1724
    • Kim, M.K.1    Jung, H.Y.2
  • 22
    • 0001440003 scopus 로고
    • Separation of bacterial menaquinones by HPLC using reverse phase (RP 18) and a silver loaded ion exchanger as stationary phases
    • Kroppenstedt, R. M. (1982). Separation of bacterial menaquinones by HPLC using reverse phase (RP 18) and a silver loaded ion exchanger as stationary phases. J Liq Chromatogr 5, 2359-2367.
    • (1982) J Liq Chromatogr , vol.5 , pp. 2359-2367
    • Kroppenstedt, R.M.1
  • 23
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • Edited by E. Stackebrandt & M. Goodfellow. New York: Wiley
    • Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. New York: Wiley.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 24
    • 34547463546 scopus 로고    scopus 로고
    • Chitinophaga ginsengisegetis sp. nov. and Chitinophaga ginsengisoli sp. nov., isolated from soil of a ginseng field in South Korea
    • Lee, H. G., An, D. S., Im, W. T., Liu, Q. M., Na, J. R., Cho, D. H., Jin, C. W., Lee, S. T. & Yang, D. C. (2007). Chitinophaga ginsengisegetis sp. nov. and Chitinophaga ginsengisoli sp. nov., isolated from soil of a ginseng field in South Korea. Int J Syst Evol Microbiol 57, 1396-1401.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1396-1401
    • Lee, H.G.1    An, D.S.2    Im, W.T.3    Liu, Q.M.4    Na, J.R.5    Cho, D.H.6    Jin, C.W.7    Lee, S.T.8    Yang, D.C.9
  • 25
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 27
    • 0020305639 scopus 로고
    • A succinoglycan-decomposing bacterium, Cytophaga arvensicola sp. nov
    • Oyaizu, H., Komagata, K., Amemura, A. & Harada, T. (1982). A succinoglycan-decomposing bacterium, Cytophaga arvensicola sp. nov. J Gen Appl Microbiol 28, 369-388.
    • (1982) J Gen Appl Microbiol , vol.28 , pp. 369-388
    • Oyaizu, H.1    Komagata, K.2    Amemura, A.3    Harada, T.4
  • 28
    • 0003157394 scopus 로고
    • Lipids in archaebacterial taxonomy
    • Edited by M. Goodfellow & D. E. Minnikin. London: Academic Press
    • Ross, H. N. M., Grant, W. D. & Harris, J. E. (1985). Lipids in archaebacterial taxonomy. In Chemical Methods in Bacterial Systematics, pp. 289-300. Edited by M. Goodfellow & D. E. Minnikin. London: Academic Press.
    • (1985) Chemical Methods in Bacterial Systematics , pp. 289-300
    • Ross, H.N.M.1    Grant, W.D.2    Harris, J.E.3
  • 29
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 30
    • 0019371499 scopus 로고
    • Chitinophaga, a new genus of chitinolytic myxobacteria
    • Sangkhobol, V. & Skerman, V. B. D. (1981). Chitinophaga, a new genus of chitinolytic myxobacteria. Int J Syst Bacteriol 31, 285-293.
    • (1981) Int J Syst Bacteriol , vol.31 , pp. 285-293
    • Sangkhobol, V.1    Skerman, V.B.D.2
  • 31
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 32
    • 1142273245 scopus 로고    scopus 로고
    • Development of a plate technique for screening of polysaccharidedegrading microorganisms by using a mixture of insoluble chromogenic substrates
    • Ten, L. N., Im, W. T., Kim, M. K., Kang, M. S. & Lee, S. T. (2004). Development of a plate technique for screening of polysaccharidedegrading microorganisms by using a mixture of insoluble chromogenic substrates. J Microbiol Methods 56, 375-382.
    • (2004) J Microbiol Methods , vol.56 , pp. 375-382
    • Ten, L.N.1    Im, W.T.2    Kim, M.K.3    Kang, M.S.4    Lee, S.T.5
  • 33
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5


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