Characterization of the activities of the CpeY, CpeZ, and CpeS bilin lyases in phycoerythrin biosynthesis in Fremyella diplosiphon strain UTEX 481

Journal of Biological Chemistry

Volumn 286, Issue 41, 2011, Pages 35509-35521

  Biswas, Avijit ^a   Boutaghou, M Nazim ^b   Alvey, Richard M ^c   Kronfel, Christina M ^a   Cole, Richard B ^b   Bryant, Donald A ^c,d   Schluchter, Wendy M ^a  

^a University of New Orleans   (United States)

^b UNIVERSITY OF NEW ORLEANS   (United States)

^c PENNSYLVANIA STATE UNIVERSITY   (United States)

^d MONTANA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ABSORBANCES; CO-EXPRESSION SYSTEMS; CYS RESIDUES; FLUORESCENCE EMISSION; GREEN LIGHT; MASS SPECTROMETRIC ANALYSIS; PHOTOSYNTHETIC LIGHT; PHYCOERYTHROBILIN; SITE-SPECIFIC; THIOETHER LINKAGES;

BIOCHEMISTRY; CHROMOPHORES; ESCHERICHIA COLI; GENES;

ENZYMES;

BACTERIAL ENZYME; CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN; LYASE; PHYCOERYTHRIN; PHYCOERYTHROBILIN; PROTEIN CPEA; PROTEIN CPES; PROTEIN CPEY; PROTEIN CPEZ; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BINDING AFFINITY; BINDING SITE; BIOSYNTHESIS; CONTROLLED STUDY; CPEA GENE; CPEYZ GENE; CYANOBACTERIUM; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME SPECIFICITY; ENZYME SUBUNIT; ESCHERICHIA COLI; FREMYELLA DIPLOSIPHON; GENE EXPRESSION SYSTEM; HETEROLOGOUS EXPRESSION; NONHUMAN; PRIORITY JOURNAL;

BACTERIAL PROTEINS; CYANOBACTERIA; LYASES; PHYCOERYTHRIN;

ESCHERICHIA COLI; FREMYELLA DIPLOSIPHON;

EID: 80053901556     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M111.284281     Document Type: Article

References (79)

1. Sidler, W. A. (1994) in The Molecular Biology of Cyanobacteria (Bryant, D. A., ed) pp. 139-216, Kluwer Academic, Dordrecht, The Netherlands
2. Bryant, D. A. (1991) in Cell Culture and Somatic Cell Genetics of Plants (Bogarad, L., and Vasil, I. L., eds) pp. 257-300, Academic Press, San Diego, CA
3. Glazer, A. N. (1989) J. Biol. Chem. 264, 1-4
4. Arciero, D. M., Bryant, D. A., and Glazer, A. N. (1988) J. Biol. Chem. 263, 18343-18349
5. Fairchild, C. D., and Glazer, A. N. (1994) J. Biol. Chem. 269, 8686-8694
6. Zhao, K. H., Deng, M. G., Zheng, M., Zhou, M., Parbel, A., Storf, M., Meyer, M., Strohmann, B., and Scheer, H. (2000) FEBS Lett. 469, 9-13
7. Scheer, H., and Zhao, K. H. (2008) Mol. Microbiol. 68, 263-276
8. Shen, G., Saunée, N. A., Williams, S. R., Gallo, E. F., Schluchter, W. M., and Bryant, D. A. (2006) J. Biol. Chem. 281, 17768-17778
9. Gómez-Lojero, C., Pérez-Gómez, B., Shen, G., Schluchter, W. M., and Bryant, D. A. (2003) Biochemistry 42, 13800-13811
10. Gindt, Y. M., Zhou, J., Bryant, D. A., and Sauer, K. (1994) Biochim. Biophys. Acta 1186, 153-162
11. Gindt, Y. M., Zhou, J., Bryant, D. A., and Sauer, K. (1992) J. Photochem. Photobiol. B 15, 75-89
12. Maxson, P., Sauer, K., Zhou, J. H., Bryant, D. A., and Glazer, A. N. (1989) Biochim. Biophys. Acta 977, 40-51
13. de Lorimier, R., Bryant, D. A., and Stevens, S. E., Jr. (1990) Biochim. Biophys. Acta 1019, 29-41
14. de Lorimier, R., Bryant, D. A., Porter, R. D., Liu, W. Y., Jay, E., and Stevens, S. E., Jr. (1984) Proc. Natl. Acad. Sci. U.S.A. 81, 7946-7950
15. Bryant, D. A., de Lorimier, R., Guglielmi, G., and Stevens, S. E., Jr. (1990) Arch. Microbiol. 153, 550-560
16. Bryant, D. A. (1988) in Light-Energy Transduction in Photosynthesis: Higher Plant and Bacterial Models (Stevens, S. E. J., and Bryant, D. A., eds) pp. 62-90, American Society of Plant Physiologists, Rockville, MD
17. Bryant, D. A., Stirewalt, V. L., Glauser, M., Frank, G., Sidler, W., and Zuber, H. (1991) Gene 107, 91-99
18. Glazer, A. N. (1988) Methods Enzymol. 167, 291-303
19. Biswas, A., Vasquez, Y. M., Dragomani, T. M., Kronfel, M. L., Williams, S. R., Alvey, R. M., Bryant, D. A., and Schluchter, W. M. (2010) Appl. Environ. Microbiol. 76, 2729-2739
20. Zhou, J., Gasparich, G. E., Stirewalt, V. L., de Lorimier, R., and Bryant, D. A. (1992) J. Biol. Chem. 267, 16138-16145
21. Fairchild, C. D., Zhao, J., Zhou, J., Colson, S. E., Bryant, D. A., and Glazer, A. N. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 7017-7021
22. Alvey, R. M., Biswas, A., Schluchter, W. M., and Bryant, D. A. (2011) J.Bacteriol. 193, 1663-1671
23. Alvey, R. M., Biswas, A., Schluchter, W. M., and Bryant, D. A. (2011) Biochemistry 50, 4890-4902
24. Wilbanks, S. M., and Glazer, A. N. (1993) J. Biol. Chem. 268, 1226-1235
25. Six, C., Thomas, J. C., Garczarek, L., Ostrowski, M., Dufresne, A., Blot, N., Scanlan, D. J., and Partensky, F. (2007) Genome Biol. 8, R259
26. Blot, N., Wu, X. J., Thomas, J. C., Zhang, J., Garczarek, L., Böhm, S., Tu, J. M., Zhou, M., Plöscher, M., Eichacker, L., Partensky, F., Scheer, H., and Zhao, K. H. (2009) J. Biol. Chem. 284, 9290-9298
27. Storf, M., Parbel, A., Meyer, M., Strohmann, B., Scheer, H., Deng, M. G., Zheng, M., Zhou, M., and Zhao, K. H. (2001) Biochemistry 40, 12444-12456
28. Jung, L. J., Chan, C. F., and Glazer, A. N. (1995) J. Biol. Chem. 270, 12877-12884
29. Zhao, K. H., Su, P., Li, J., Tu, J. M., Zhou, M., Bubenzer, C., and Scheer, H. (2006) J. Biol. Chem. 281, 8573-8581
30. Zhao, K. H., Su, P., Tu, J. M., Wang, X., Liu, H., Plöscher, M., Eichacker, L., Yang, B., Zhou, M., and Scheer, H. (2007) Proc. Natl. Acad. Sci. U.S.A. 104, 14300-14305
31. Wiethaus, J., Busch, A. W., Kock, K., Leichert, L. I., Herrmann, C., and Frankenberg-Dinkel, N. (2010) J. Biol. Chem. 285, 37561-37569
32. Shen, G., Schluchter, W. M., and Bryant, D. A. (2008) J. Biol. Chem. 283, 7503-7512
33. Saunée, N. A., Williams, S. R., Bryant, D. A., and Schluchter, W. M. (2008) J. Biol. Chem. 283, 7513-7522
34. Zhao, K. H., Zhang, J., Tu, J. M., Böhm, S., Plöscher, M., Eichacker, L., Bubenzer, C., Scheer, H., Wang, X., and Zhou, M. (2007) J. Biol. Chem. 282, 34093-34103
35. Zhao, K. H., Su, P., Böhm, S., Song, B., Zhou, M., Bubenzer, C., and Scheer, H. (2005) Biochim. Biophys. Acta 1706, 81-87
36. Hu, I. C., Lee, T. R., Lin, H. F., Chiueh, C. C., and Lyu, P. C. (2006) Biochemistry 45, 7092-7099
37. Wu, S. H., and Lagarias, J. C. (2000) Biochemistry 39, 13487-13495
38. Ulijasz, A. T., Cornilescu, G., von Stetten, D., Cornilescu, C., Velazquez Escobar, F., Zhang, J., Stankey, R. J., Rivera, M., Hildebrandt, P., and Vierstra, R. D. (2009) J. Biol. Chem. 284, 29757-29772
39. Hirose, Y., Narikawa, R., Katayama, M., and Ikeuchi, M. (2010) Proc. Natl. Acad. Sci. U.S.A. 107, 8854-8859
40. Sidler, W., Kumpf, B., Rüdiger, W., and Zuber, H. (1986) Biol. Chem. Hoppe-Seyler 367, 627-642
41. Fairchild, C. D., and Glazer, A. N. (1994) J. Biol. Chem. 269, 28988-28996
42. Ong, L. J., and Glazer, A. N. (1991) J. Biol. Chem. 266, 9515-9527
43. Isailovic, D., Sultana, I., Phillips, G. J., and Yeung, E. S. (2006) Anal. Biochem. 358, 38-50
44. Kahn, K., Mazel, D., Houmard, J., Tandeau de Marsac, N., and Schaefer, M. R. (1997) J. Bacteriol. 179, 998-1006
45. Mazel, D., Guglielmi, G., Houmard, J., Sidler, W., Bryant, D. A., and Tandeau de Marsac, N. (1986) Nucleic Acids Res. 14, 8279-8290
46. Miller, C. A., Leonard, H. S., Pinsky, I. G., Turner, B. M., Williams, S. R., Harrison, L., Jr., Fletcher, A. F., Shen, G., Bryant, D. A., and Schluchter, W. M. (2008) J. Biol. Chem. 283, 19293-19300
47. Shen, G. Z., Saunee, N. A., Gallo, E., Begovic, Z., Schluchter, W. M., and Bryant, D. A. (2004) in Photosynthesis 2004 Light-Harvesting Systems Workshop (Niederman, R. A., Blankenship, R. E., Frank, H., Robert, B., and van Grondelle, R., eds) pp. 14-15, Saint Adele, Quebec, Canada
48. Dammeyer, T., Bagby, S. C., Sullivan, M. B., Chisholm, S. W., and Frankenberg-Dinkel, N. (2008) Curr. Biol. 18, 442-448
49. Tooley, A. J., Cai, Y. A., and Glazer, A. N. (2001) Proc. Natl. Acad. Sci. U.S.A. 98, 10560-10565
50. Berkelman, T. R., and Lagarias, J. C. (1986) Anal. Biochem. 156, 194-201
51. Raps, S. (1990) Plant Physiol. 92, 358-362
52. Parker, C. A., and Rees, W. T. (1960) Analyst 85, 587-600
53. Lakowicz, J. R. (1983) Principles of Fluorescence Spectroscopy, Plenum Press, New York
54. Boutaghou, M. N., Biswas, A., Cole, R. B., and Schluchter, W. M. (2010) in Proceedings of the 58thASMSConference on Mass Spectrometry and Allied Topics, Salt Lake City, UT, May 26, 2010, American Society for Mass Spectrometry, Santa Fe, NM
55. Ficner, R., Lobeck, K., Schmidt, G., and Huber, R. (1992) J. Mol. Biol. 228, 935-950
56. Boutaghou, M. N., Biswas, A., Schluchter, W. M., and Cole, R. B. (2011) in Proceedings of the 59thASMSConference on Mass Spectrometry and Allied Topics, Denver, CO, June 9, 2011, American Society for Mass Spectrometry, Santa Fe, NM
57. Kehoe, D. M., and Gutu, A. (2006) Annu. Rev. American Society for Mass Spectrometry santa Fe, NM Plant Biol. 57, 127-150
58. Tandeau de Marsac, N., and Houmard, J. (1988) Methods Enzymol. 167, 318-328
59. Federspiel, N. A., and Grossman, A. R. (1990) J. Bacteriol. 172, 4072-4081
60. Glazer, A. N. (1994) J. Appl. Phycol. 6, 105-112
61. Nguyen, D. C., Keller, R. A., Jett, J. H., and Martin, J. C. (1987) Anal. Chem. 59, 2158-2161
62. Hess, W. R., Partensky, F., van der Staay, G. W., Garcia-Fernandez, J. M., Börner, T., and Vaulot, D. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 11126-11130
63. Steglich, C., Frankenberg-Dinkel, N., Penno, S., and Hess, W. R. (2005) Environ. Microbiol. 7, 1611-1618
64. Böhm, S., Endres, S., Scheer, H., and Zhao, K. H. (2007) J. Biol. Chem. 282, 25357-25366
65. Takano, H., and Gusella, J. (2002) BMC Neurosci. 3, 15
66. Andrade, M. A., Petosa, C., O'Donoghue, S. I., Müller, C. W., and Bork, P. (2001) J. Mol. Biol. 309, 1-18
67. Collier, J. L., and Grossman, A. R. (1994) EMBO J. 13, 1039-1047
68. Baier, K., Lehmann, H., Stephan, D. P., and Lockau, W. (2004) Microbiology 150, 2739-2749
69. Dines, M., Sendersky, E., David, L., Schwarz, R., and Adir, N. (2008) J. Biol. Chem. 283, 30330-30340
70. Bienert, R., Baier, K., Volkmer, R., Lockau, W., and Heinemann, U. (2006) J. Biol. Chem. 281, 5216-5223
71. Toole, C. M., Plank, T. L., Grossman, A. R., and Anderson, L. K. (1998) Mol. Microbiol. 30, 475-486
72. Anderson, L. K., and Toole, C. M. (1998) Mol. Microbiol. 30, 467-474
73. Tooley, A. J., and Glazer, A. N. (2002) J. Bacteriol. 184, 4666-4671
74. Klotz, A. V., Glazer, A. N., Bishop, J. E., Nagy, J. O., and Rapoport, H. (1986) J. Biol. Chem. 261, 6797-6805
75. Bishop, J. E., Lagarias, J. C., Nagy, J. O., Schoenleber, R. W., Rapoport, H., Klotz, A. V., and Glazer, A. N. (1986) J. Biol. Chem. 261, 6790-6796
76. Isailovic, D., Li, H. W., and Yeung, E. S. (2004) J. Chromatogr. A 1051, 119-130
77. Bishop, J. E., Rapoport, H., Klotz, A. V., Chan, C. F., Glazer, A. N., Füglistaller, P., and Zuber, H. (1987) J. Am. Chem. Soc. 109, 875-881
78. Tsien, R. Y. (1998) Annu. Rev. Biochem. 67, 509-544
79. Huang, B., Wang, G. C., Zeng, C. K., and Li, Z. G. (2002) Cancer Biother. Radiopharm. 17, 35-42