Phycourobilinin trichromatic phycocyanin from oceanic cyanobacteria is formed post-translationally by a phycoerythrobilin lyase-isomerase

Journal of Biological Chemistry

Volumn 284, Issue 14, 2009, Pages 9290-9298

  Blot, Nicolas ^a,b   Wu, Xian Jun ^c,d   Thomas, Jean Claude ^b   Zhang, Juan ^c,d   Garczarek, Laurence ^a,b   Böhm, Stephan ^e   Tu, Jun Ming ^c,d,e   Zhou, Ming ^c,d   Plöscher, Matthias ^e   Eichacker, Lutz ^e,f   Partensky, Frédéric ^a,b   Scheer, Hugo ^e   Zhao, Kai Hong ^c,d  

^a SORBONNE UNIVERSITÉ   (France)

^b STATION BIOLOGIQUE DE ROSCOFF   (France)

^c HUAZHONG AGRICULTURAL UNIVERSITY   (China)

^d HUAZHONG UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

^e UNIVERSITY OF MUNICH   (Germany)

^f Center for Organelle Research (CORE)   (Norway)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; ANTENNAS; BIOCHEMISTRY; BIOSYNTHESIS; CATALYSIS; ENERGY TRANSFER; ENZYMES; ESCHERICHIA COLI;

BIOSYNTHETIC PATHWAY; COVALENT ATTACHMENT; HETEROLOGOUS EXPRESSION; MONOMERIC ENZYMES; PHOTOSYNTHETIC CAPACITY; PHYCOBILIPROTEINS; POST-TRANSLATIONAL MODIFICATIONS; WAVELENGTH RANGES;

CHROMOPHORES;

FRESH WATER; HYBRID PROTEIN; ISOMERASE; LYASE; PHYCOCYANIN; PHYCOERYTHROBILIN; PHYCOUROBILIN; PROTEIN RPCG; UNCLASSIFIED DRUG; PHYCOBILIN; PHYCOERYTHRIN; PHYCOVIOLOBILIN; SEA WATER;

ALPHA CHAIN; ARTICLE; BIOSYNTHESIS; CATALYSIS; CYANOBACTERIUM; ESCHERICHIA COLI; EXTRACTION; GENE EXPRESSION; ISOMERIZATION; LIGHT ADAPTATION; MASS SPECTROMETRY; MOLECULAR CLONING; NONHUMAN; OCEANIC REGIONS; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN ISOLATION; PROTEIN PROCESSING; SYNECHOCOCCUS; CHEMICAL STRUCTURE; CHEMISTRY; CHROMATIN; CIRCULAR DICHROISM; ENZYME SPECIFICITY; GENETICS; METABOLISM; MICROBIOLOGY; MOLECULAR EVOLUTION; PHYLOGENY;

CYANOBACTERIA; ESCHERICHIA COLI; SYNECHOCOCCUS SP.;

CHROMATIN; CIRCULAR DICHROISM; CYANOBACTERIA; EVOLUTION, MOLECULAR; ISOMERASES; LYASES; MOLECULAR STRUCTURE; PHYCOBILINS; PHYCOCYANIN; PHYCOERYTHRIN; PHYLOGENY; PROTEIN PROCESSING, POST-TRANSLATIONAL; SEAWATER; SUBSTRATE SPECIFICITY;

EID: 66149155036     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M809784200     Document Type: Article

References (54)

1. Glazer, A. N. (1989) J. Biol. Chem. 264, 1-4
2. Green, B., and Parson, W. (2003) Light-harvesting Antennas in Photosynthesis, Kluwer, Dordrecht, The Netherlands
3. Garcia-Pichel, F., Belnap, J., Neuer, S., and Schanz, F. (2003) Algol. Stud. 109, 213-228
4. Gantt, E. (1986) in Photosynthesis III: Photosynthetic Membranes and Light-harvesting Systems (Staehelin, L. A., and Arntzen, C. J., eds) pp. 260-268, Springer, Berlin
5. Sidler, W. A. (1994) in The Molecular Biology of Cyanobacteria (Bryant, D. A., ed) pp. 139-216, Kluwer, Dordrecht, The Netherlands
6. Partensky, F., Blanchot, J., and Vaulot, D. (1999) in Marine Cyanobacteria (Charpy, L., and Larkum, A., eds) pp. 457-475, Museée Océanographique, Monaco
7. Six, C., Thomas, J. C., Garczarek, L., Ostrowski, M., Dufresne, A., Blot, N., Scanlan, D. J., and Partensky, F. (2007) Genome Biol. 8, R259
8. Canaani, O., Lipschultz, C. A., and Gantt, E. (1980) FEBS Lett. 115, 225-229
9. Lipschultz, C. A., and Gantt, E. (1981) Biochemistry 20, 3371-3376
10. Lundell, D. J., Williams, R. C., and Glazer, A. N. (1981) J. Biol. Chem. 256, 3580-3592
11. Fairchild, C. D., and Glazer, A. N. (1994) J. Biol. Chem. 269, 8686-8694
12. Schluchter, W. M., and Glazer, A. N. (1999) in The Phototrophic Prokaryotes (Peschek, G. A., Löffelhardt, W., and Schmetterer, G., eds) pp. 83-95, Kluwer/Plenum Press, New York
13. Schluchter, W. M., and Bryant, D. A. (2002) in Heme, Chlorophyll, and Bilins (Smith, A. G., and Witty, M., eds) pp. 311-334, Humana Press, Totowa, NJ
14. Storf, M., Parbel, A., Meyer, M., Strohmann, B., Scheer, H., Deng, M., Zheng, M., Zhou, M., and Zhao, K. (2001) Biochemistry 40, 12444-12456
15. Saunée, N. A., Williams, S. R., Bryant, D. A., and Schluchter, W. M. (2008) J. Biol. Chem. 283, 7513-7522
16. Shen, G., Schluchter, W. M., and Bryant, D. A. (2008) J. Biol. Chem. 283, 7503-7512
17. Shen, G., Saunee, N. A., Williams, S. R., Gallo, E. F., Schluchter, W. M., and Bryant, D. A. (2006) J. Biol. Chem. 281, 17768-17778
18. Scheer, H., and Zhao, K.-H. (2008) Mol. Microbiol. 68, 263-276
19. Zhao, K.-H., Zhang, J., Tu, J. M., Böhm, S., Plöscher, M., Eichacker, L., Bubenzer, C., Scheer, H., Wang, X., and Zhou, M. (2007) J. Biol. Chem. 282, 34093-34103
20. Zhao, K.-H., Su, P., Tu, J. M., Wang, X., Liu, H., Plöscher, M., Eichacker, L., Yang, B., Zhou, M., and Scheer, H. (2007) Proc. Natl. Acad. Sci. U. S. A. 104, 14300-14305
21. Miller, C. A., Leonard, H. S., Pinsky, I. G., Turner, B. M., Williams, S. R., Harrison, L., Jr., Fletcher, A. F., Shen, G., Bryant, D. A., and Schluchter, W. M. (2008) J. Biol. Chem. 283, 19293-19300
22. Shen, G., Leonard, H. S., Schluchter, W. M., and Bryant, D. A. (2008) J. Bacteriol. 190, 4808-4817
23. Thomas, B. A., Bricker, T. M., and Klotz, A. V. (1993) Biochim. Biophys. Acta 1143, 104-108
24. Liu, L. N., Chen, X. L., Zhang, Y. Z., and Zhou, B. C. (2005) Biochim. Biophys. Acta 1708, 133-142
25. Zehr, J. P., Bench, S. R., Mondragon, E. A., McCarren, J., and DeLong, E. F. (2007) Proc. Natl. Acad. Sci. U. S. A. 104, 17807-17812
26. Dammeyer, T., and Frankenberg-Dinkel, N. (2008) Photochem. Photobiol. Sci. 7, 1121-1130
27. Swanson, R. V., Ong, L. J., Wilbanks, S. M., and Glazer, A. N. (1991) J. Biol. Chem. 266, 9528-9534
28. Ong, L. J., and Glazer, A. N. (1991) J. Biol. Chem. 266, 9515-9527
29. Ong, L. J., Glazer, A. N., and Waterbury, J. B. (1984) Science 224, 80-83
30. Subramaniam, A., Carpenter, E. J., Karentz, D., and Falkowski, P. G. (1999) Limnol. Oceanogr. 44, 608-617
31. Dufresne, A., Ostrowski, M., Scanlan, D. J., Garczarek, L., Mazard, S., Palenik, B. P., Paulsen, I. T., Tandeau de Marsac, N., Wincker, P., Dossat, C., Ferriera, S., Johnson, J., Post, A. F., Hess, W. R., and Partensky, F. (2008) Genome Biol. 9, R90
32. Ong, L. J., and Glazer, A. N. (1988) in Light-Energy Transduction in Photosynthesis: Higher Plant and Bacterial Models (Stevens, S. E., and Bryant, D. A., eds) pp. 102-121, American Society of Plant Physiologists, Rockville, MD
33. Ong, L. J., and Glazer, A. N. (1987) J. Biol. Chem. 262, 6323-6327
34. Wilbanks, S. M., and Glazer, A. N. (1993) J. Biol. Chem. 268, 1226-1235
35. Zhao, K. H., Wu, D., Zhou, M., Zhang, L., Böhm, S., Bubenzer, C., and Scheer, H. (2005) Biochemistry 44, 8126-8137
36. Everroad, C., Six, C., Partensky, F., Thomas, J. C., Holtzendorff, J., and Wood, A. M. (2006) J. Bacteriol. 188, 3345-3356
37. Six, C., Thomas, J.-C., Thion, L., Lemoine, Y., Zal, F., and Partensky, F. (2005) J. Bacteriol. 187, 1685-1694
38. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: a Laboratory Manual, 2nd Ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
39. Zhao, K. H., Zhu, J. P., Song, B., Zhou, M., Storf, M., Böhm, S., Bubenzer, C., and Scheer, H. (2004) Biochim. Biophys. Acta 1657, 131-145
40. Zhao, K. H., Su, P., Li, J. A., Tu, J. M., Zhou, M., Bubenzer, C., and Scheer, H. (2006) J. Biol. Chem. 281, 8573-8581
41. Zhao, K.-H., Wu, D., Zhang, L., Zhou, M., Böhm, S., Bubenzer, C., and Scheer, H. (2006) FEBS J. 273, 1262-1274
42. Laemmli, U. K., and Favre, M. (1973) J. Mol. Biol. 80, 575-599
43. Berkelman, T., and Lagarias, J. C. (1986) Anal. Biochem. 156, 194-201
44. MacColl, R., Eisele, L. E., Williams, E. C., and Bowser, S. S. (1996) J. Biol. Chem. 271, 17157-17160
45. Yu, M. H., Glazer, A. N., Spencer, K. G., and West, J. A. (1981) Plant Physiol. 68, 482-488
46. Zhao, K. H., Haessner, R., Cmiel, E., and Scheer, H. (1995) Biochim. Biophys. Acta 1228, 235-243
47. Glazer, A. N., and Fang, S. (1973) J. Biol. Chem. 248, 659-662
48. Glazer, A. N., and Hixson, C. S. (1975) J. Biol. Chem. 250, 5487-5495
49. Glazer, A. N., and Hixson, C. S. (1977) J. Biol. Chem. 252, 32-42
50. Bishop, J. E., Rapoport, H., Klotz, A. V., Chan, C. F., Glazer, A. N., Füglistaller, P., and Zuber, H. (1987) J. Am. Chem. Soc. 109, 875-881
51. Bradford, M. M. (1976) Anal. Biochem. 72, 248-254
52. Tooley, A. J., and Glazer, A. N. (2002) J. Bacteriol. 184, 4666-4671
53. Frankenberg, N., and Lagarias, J. C. (2003) J. Biol. Chem. 278, 9219-9226
54. Zhao, K.-H., Ran, Y., Li, M., Sun, Y.-N., Zhou, M., Storf, M., Kupka, M., Böhm, S., Bubenzer, C., and Scheer, H. (2004) Biochemistry 43, 11576-11588